RNA–Protein interactions for RNA: ENST00000553491.5

ATXN3-220, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 857 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-220ENST00000553491 TCP11L1Q9NUJ3 509 aa5.4□□□□□ -1.54
ATXN3-220ENST00000553491 ROBO3Q96MS0 1386 aa5.4□□□□□ -1.55
ATXN3-220ENST00000553491 FRMPD3Q5JV73 1810 aa5.39□□□□□ -1.55
ATXN3-220ENST00000553491 MYH9P35579 1960 aaKnown RBP5.39□□□□□ -1.55
ATXN3-220ENST00000553491 TRIP12Q14669 1992 aaPredicted RBP5.39□□□□□ -1.55
ATXN3-220ENST00000553491 IGKV6D-41A0A0C4DH26 115 aa5.39□□□□□ -1.55
ATXN3-220ENST00000553491 C9orf118A6NHY6 69 aa5.39□□□□□ -1.55
ATXN3-220ENST00000553491 SLC15A5A6NIM6 579 aa5.39□□□□□ -1.55
ATXN3-220ENST00000553491 PRC1O43663 620 aa5.39□□□□□ -1.55
ATXN3-220ENST00000553491 CNMDO75829 334 aa5.39□□□□□ -1.55
ATXN3-220ENST00000553491 REC8O95072 547 aa5.39□□□□□ -1.55
ATXN3-220ENST00000553491 SLC25A27O95847 323 aa5.39□□□□□ -1.55
ATXN3-220ENST00000553491 PGK2P07205 417 aa5.39□□□□□ -1.55
ATXN3-220ENST00000553491 PARP1P09874 1014 aaKnown RBP5.39□□□□□ -1.55
ATXN3-220ENST00000553491 CCL5P13501 91 aa5.39□□□□□ -1.55
ATXN3-220ENST00000553491 AOAHP28039 575 aa5.39□□□□□ -1.55
ATXN3-220ENST00000553491 MCM5P33992 734 aa5.39□□□□□ -1.55
ATXN3-220ENST00000553491 RGS2P41220 211 aa5.39□□□□□ -1.55
ATXN3-220ENST00000553491 EPHB1P54762 984 aa5.39□□□□□ -1.55
ATXN3-220ENST00000553491 SCAND1P57086 179 aa5.39□□□□□ -1.55
ATXN3-220ENST00000553491 KLF1Q13351 362 aaPredicted RBP5.39□□□□□ -1.55
ATXN3-220ENST00000553491 KCTD2Q14681 263 aa5.39□□□□□ -1.55
ATXN3-220ENST00000553491 USH1GQ495M9 461 aa5.39□□□□□ -1.55
ATXN3-220ENST00000553491 PRAMEF19Q5SWL8 479 aa5.39□□□□□ -1.55
ATXN3-220ENST00000553491 PHF19Q5T6S3 580 aa5.39□□□□□ -1.55
ATXN3-220ENST00000553491 LCE5AQ5TCM9 118 aa5.39□□□□□ -1.55
ATXN3-220ENST00000553491 FRMD7Q6ZUT3 714 aa5.39□□□□□ -1.55
ATXN3-220ENST00000553491 RASGRP2Q7LDG7 609 aa5.39□□□□□ -1.55
ATXN3-220ENST00000553491 CATIPQ7Z7H3 387 aa5.39□□□□□ -1.55
ATXN3-220ENST00000553491 RTN4RL1Q86UN2 441 aaPredicted RBP5.39□□□□□ -1.55
ATXN3-220ENST00000553491 FAM160B2Q86V87 743 aa5.39□□□□□ -1.55
ATXN3-220ENST00000553491 DGKHQ86XP1 1220 aa5.39□□□□□ -1.55
ATXN3-220ENST00000553491 ZZZ3Q8IYH5 903 aa5.39□□□□□ -1.55
ATXN3-220ENST00000553491 MB21D1Q8N884 522 aa5.39□□□□□ -1.55
ATXN3-220ENST00000553491 ENAHQ8N8S7 591 aaPredicted RBP5.39□□□□□ -1.55
ATXN3-220ENST00000553491 GMCL1P1Q8NEA9 526 aa5.39□□□□□ -1.55
ATXN3-220ENST00000553491 ERCC4Q92889 916 aaPredicted RBP5.39□□□□□ -1.55
ATXN3-220ENST00000553491 TCEANC2Q96MN5 208 aa5.39□□□□□ -1.55
ATXN3-220ENST00000553491 GBP4Q96PP9 640 aa5.39□□□□□ -1.55
ATXN3-220ENST00000553491 NEK1Q96PY6 1258 aa5.39□□□□□ -1.55
ATXN3-220ENST00000553491 SSBP3Q9BWW4 388 aaPredicted RBP5.39□□□□□ -1.55
ATXN3-220ENST00000553491 SEMA4AQ9H3S1 761 aa5.39□□□□□ -1.55
ATXN3-220ENST00000553491 MROH8Q9H579 483 aa5.39□□□□□ -1.55
ATXN3-220ENST00000553491 DLL4Q9NR61 685 aa5.39□□□□□ -1.55
ATXN3-220ENST00000553491 MORF4L1Q9UBU8 362 aa5.39□□□□□ -1.55
ATXN3-220ENST00000553491 MSRAQ9UJ68 235 aa5.39□□□□□ -1.55
ATXN3-220ENST00000553491 CROTQ9UKG9 612 aa5.39□□□□□ -1.55
ATXN3-220ENST00000553491 CCPG1Q9ULG6 757 aa5.39□□□□□ -1.55
ATXN3-220ENST00000553491 ZMYM6O95789 1325 aa5.39□□□□□ -1.55
ATXN3-220ENST00000553491 ADGRA2Q96PE1 1338 aa5.39□□□□□ -1.55
ATXN3-220ENST00000553491 RBBP6Q7Z6E9 1792 aaKnown RBP5.39□□□□□ -1.55
ATXN3-220ENST00000553491 WDR81Q562E7 1941 aa5.38□□□□□ -1.55
ATXN3-220ENST00000553491 KLRF2D3W0D1 207 aa5.38□□□□□ -1.55
ATXN3-220ENST00000553491 GOLGA6L22H0YM25 854 aa5.38□□□□□ -1.55
ATXN3-220ENST00000553491 STRNO43815 780 aa5.38□□□□□ -1.55
ATXN3-220ENST00000553491 KDM1AO60341 852 aa5.38□□□□□ -1.55
ATXN3-220ENST00000553491 B4GALT3O60512 393 aa5.38□□□□□ -1.55
ATXN3-220ENST00000553491 KLHL18O94889 574 aa5.38□□□□□ -1.55
ATXN3-220ENST00000553491 IL18BPO95998 194 aa5.38□□□□□ -1.55
ATXN3-220ENST00000553491 CELA3BP08861 270 aa5.38□□□□□ -1.55
ATXN3-220ENST00000553491 ENO2P09104 434 aaPredicted RBP5.38□□□□□ -1.55
ATXN3-220ENST00000553491 MYBL2P10244 700 aa5.38□□□□□ -1.55
ATXN3-220ENST00000553491 CPA1P15085 419 aa5.38□□□□□ -1.55
ATXN3-220ENST00000553491 EN2P19622 333 aaPredicted RBP5.38□□□□□ -1.55
ATXN3-220ENST00000553491 RXRAP19793 462 aa5.38□□□□□ -1.55
ATXN3-220ENST00000553491 ADORA2AP29274 412 aa5.38□□□□□ -1.55
ATXN3-220ENST00000553491 MC4RP32245 332 aa5.38□□□□□ -1.55
ATXN3-220ENST00000553491 PFKPQ01813 784 aa5.38□□□□□ -1.55
ATXN3-220ENST00000553491 EFEMP1Q12805 493 aa5.38□□□□□ -1.55
ATXN3-220ENST00000553491 NECTIN1Q15223 517 aa5.38□□□□□ -1.55
ATXN3-220ENST00000553491 CCL14Q16627 93 aa5.38□□□□□ -1.55
ATXN3-220ENST00000553491 UBXN11Q5T124 520 aa5.38□□□□□ -1.55
ATXN3-220ENST00000553491 MFSD14CQ5VZR4 134 aa5.38□□□□□ -1.55
ATXN3-220ENST00000553491 ANO1Q5XXA6 986 aa5.38□□□□□ -1.55
ATXN3-220ENST00000553491 VASNQ6EMK4 673 aa5.38□□□□□ -1.55
ATXN3-220ENST00000553491 KRTAP5-3Q6L8H2 238 aa5.38□□□□□ -1.55
ATXN3-220ENST00000553491 STOX1Q6ZVD7 989 aa5.38□□□□□ -1.55
ATXN3-220ENST00000553491 NOL8Q76FK4 1167 aaKnown RBP5.38□□□□□ -1.55
ATXN3-220ENST00000553491 HIPK4Q8NE63 616 aa5.38□□□□□ -1.55
ATXN3-220ENST00000553491 LMBR1Q8WVP7 490 aa5.38□□□□□ -1.55
ATXN3-220ENST00000553491 JAKMIP1Q96N16 626 aaKnown RBP5.38□□□□□ -1.55
ATXN3-220ENST00000553491 DEFB118Q96PH6 123 aa5.38□□□□□ -1.55
ATXN3-220ENST00000553491 MYL10Q9BUA6 226 aa5.38□□□□□ -1.55
ATXN3-220ENST00000553491 BDH2Q9BUT1 245 aa5.38□□□□□ -1.55
ATXN3-220ENST00000553491 KCND1Q9NSA2 647 aa5.38□□□□□ -1.55
ATXN3-220ENST00000553491 GJD2Q9UKL4 321 aa5.38□□□□□ -1.55
ATXN3-220ENST00000553491 INVSQ9Y283 1065 aa5.38□□□□□ -1.55
ATXN3-220ENST00000553491 SPEF1Q9Y4P9 236 aa5.38□□□□□ -1.55
ATXN3-220ENST00000553491 RIPK3Q9Y572 518 aa5.38□□□□□ -1.55
ATXN3-220ENST00000553491 ASB1Q9Y576 335 aa5.38□□□□□ -1.55
ATXN3-220ENST00000553491 A0A0G2JMZ2 1700 aa5.37□□□□□ -1.55
ATXN3-220ENST00000553491 LCTP09848 1927 aa5.37□□□□□ -1.55
ATXN3-220ENST00000553491 LOXHD1Q8IVV2 1947 aa5.37□□□□□ -1.55
ATXN3-220ENST00000553491 GOLGA8AA7E2F4 631 aa5.37□□□□□ -1.55
ATXN3-220ENST00000553491 ZNF839A8K0R7 811 aa5.37□□□□□ -1.55
ATXN3-220ENST00000553491 GOLGA8BA8MQT2 603 aa5.37□□□□□ -1.55
ATXN3-220ENST00000553491 MPIG6BO95866 241 aa5.37□□□□□ -1.55
ATXN3-220ENST00000553491 MT-CO1P00395 513 aa5.37□□□□□ -1.55
ATXN3-220ENST00000553491 KNG1P01042 644 aa5.37□□□□□ -1.55
ATXN3-220ENST00000553491 ITGB3P05106 788 aa5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms