RNA–Protein interactions for RNA: ENST00000548938.5

HDAC7-228, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 2,719 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-228ENST00000548938 F8VP50 259 aa14.41□□□□□ -0.1
HDAC7-228ENST00000548938 TM9SF1O15321 606 aa14.41□□□□□ -0.1
HDAC7-228ENST00000548938 AMPD1P23109 780 aa14.41□□□□□ -0.1
HDAC7-228ENST00000548938 CPA2P48052 419 aa14.41□□□□□ -0.1
HDAC7-228ENST00000548938 GCLCP48506 637 aaPredicted RBP14.41□□□□□ -0.1
HDAC7-228ENST00000548938 AP1B1Q10567 949 aa14.41□□□□□ -0.1
HDAC7-228ENST00000548938 THOC5Q13769 683 aaKnown RBP14.41□□□□□ -0.1
HDAC7-228ENST00000548938 PHF13Q86YI8 300 aaPredicted RBP14.41□□□□□ -0.1
HDAC7-228ENST00000548938 RHPN2Q8IUC4 686 aa14.41□□□□□ -0.1
HDAC7-228ENST00000548938 PDCD7Q8N8D1 485 aaKnown RBP14.41□□□□□ -0.1
HDAC7-228ENST00000548938 ATP11CQ8NB49 1132 aa14.41□□□□□ -0.1
HDAC7-228ENST00000548938 CFAP61Q8NHU2 1237 aa14.41□□□□□ -0.1
HDAC7-228ENST00000548938 DCAKDQ8WVC6 231 aa14.41□□□□□ -0.1
HDAC7-228ENST00000548938 AGBL1Q96MI9 1066 aa14.41□□□□□ -0.1
HDAC7-228ENST00000548938 TIPINQ9BVW5 301 aa14.41□□□□□ -0.1
HDAC7-228ENST00000548938 ACSS3Q9H6R3 686 aa14.41□□□□□ -0.1
HDAC7-228ENST00000548938 SAE1Q9UBE0 346 aaPredicted RBP14.41□□□□□ -0.1
HDAC7-228ENST00000548938 hCG_1818297A0A087WSY0 165 aa14.41□□□□□ -0.1
HDAC7-228ENST00000548938 NFIBO00712 420 aa14.41□□□□□ -0.1
HDAC7-228ENST00000548938 DNAJC6O75061 913 aa14.41□□□□□ -0.1
HDAC7-228ENST00000548938 ESRRAP11474 423 aaPredicted RBP14.41□□□□□ -0.1
HDAC7-228ENST00000548938 ERFP50548 548 aa14.41□□□□□ -0.1
HDAC7-228ENST00000548938 GDF10P55107 478 aa14.41□□□□□ -0.1
HDAC7-228ENST00000548938 POLE2P56282 527 aa14.41□□□□□ -0.1
HDAC7-228ENST00000548938 MRPS9P82933 396 aaKnown RBP14.41□□□□□ -0.1
HDAC7-228ENST00000548938 R3HDM1Q15032 1099 aaKnown RBP14.41□□□□□ -0.1
HDAC7-228ENST00000548938 BRDTQ58F21 947 aaPredicted RBP14.41□□□□□ -0.1
HDAC7-228ENST00000548938 WDR44Q5JSH3 913 aa14.41□□□□□ -0.1
HDAC7-228ENST00000548938 TDRD10Q5VZ19 366 aaKnown RBP14.41□□□□□ -0.1
HDAC7-228ENST00000548938 FAM43BQ6ZT52 329 aaPredicted RBP14.41□□□□□ -0.1
HDAC7-228ENST00000548938 C3orf62Q6ZUJ4 267 aa14.41□□□□□ -0.1
HDAC7-228ENST00000548938 CHURC1Q8WUH1 139 aa14.41□□□□□ -0.1
HDAC7-228ENST00000548938 ARHGEF4Q9NR80 690 aa14.41□□□□□ -0.1
HDAC7-228ENST00000548938 IP6K2Q9UHH9 426 aa14.41□□□□□ -0.1
HDAC7-228ENST00000548938 DRG1Q9Y295 367 aaKnown RBP14.41□□□□□ -0.1
HDAC7-228ENST00000548938 PCDHB4Q9Y5E5 795 aa14.41□□□□□ -0.1
HDAC7-228ENST00000548938 PTPRJQ12913 1337 aa14.4□□□□□ -0.1
HDAC7-228ENST00000548938 COL2A1P02458 1487 aaPredicted RBP14.4□□□□□ -0.1
HDAC7-228ENST00000548938 DLDP09622 509 aaKnown RBP14.4□□□□□ -0.1
HDAC7-228ENST00000548938 BGNP21810 368 aa14.4□□□□□ -0.1
HDAC7-228ENST00000548938 PHBP35232 272 aa14.4□□□□□ -0.1
HDAC7-228ENST00000548938 HSD17B4P51659 736 aa14.4□□□□□ -0.1
HDAC7-228ENST00000548938 DYNLT1P63172 113 aa14.4□□□□□ -0.1
HDAC7-228ENST00000548938 MTMR1Q13613 665 aa14.4□□□□□ -0.1
HDAC7-228ENST00000548938 SPDYE2Q495Y8 402 aa14.4□□□□□ -0.1
HDAC7-228ENST00000548938 CCDC62Q6P9F0 684 aa14.4□□□□□ -0.1
HDAC7-228ENST00000548938 CCNJLQ8IV13 435 aa14.4□□□□□ -0.1
HDAC7-228ENST00000548938 C4orf19Q8IY42 314 aa14.4□□□□□ -0.1
HDAC7-228ENST00000548938 PPFIBP2Q8ND30 876 aa14.4□□□□□ -0.1
HDAC7-228ENST00000548938 FBXO36Q8NEA4 188 aa14.4□□□□□ -0.1
HDAC7-228ENST00000548938 AGBL3Q8NEM8 1001 aa14.4□□□□□ -0.1
HDAC7-228ENST00000548938 ZFAND2BQ8WV99 257 aa14.4□□□□□ -0.1
HDAC7-228ENST00000548938 CPT1BQ92523 772 aa14.4□□□□□ -0.1
HDAC7-228ENST00000548938 GATA6Q92908 595 aa14.4□□□□□ -0.1
HDAC7-228ENST00000548938 NKD2Q969F2 451 aaPredicted RBP14.4□□□□□ -0.1
HDAC7-228ENST00000548938 TTC17Q96AE7 1141 aa14.4□□□□□ -0.1
HDAC7-228ENST00000548938 TUBB6Q9BUF5 446 aa14.4□□□□□ -0.1
HDAC7-228ENST00000548938 APOBEC3GQ9HC16 384 aaKnown RBP14.4□□□□□ -0.1
HDAC7-228ENST00000548938 PARVAQ9NVD7 372 aa14.4□□□□□ -0.1
HDAC7-228ENST00000548938 NFKBIEO00221 500 aa14.4□□□□□ -0.1
HDAC7-228ENST00000548938 FCHO1O14526 889 aa14.4□□□□□ -0.1
HDAC7-228ENST00000548938 MAP3K7O43318 606 aa14.4□□□□□ -0.1
HDAC7-228ENST00000548938 ITGAVP06756 1048 aa14.4□□□□□ -0.1
HDAC7-228ENST00000548938 RARBP10826 455 aa14.4□□□□□ -0.1
HDAC7-228ENST00000548938 NEK3P51956 506 aa14.4□□□□□ -0.1
HDAC7-228ENST00000548938 PSMC5P62195 406 aa14.4□□□□□ -0.1
HDAC7-228ENST00000548938 OGDHQ02218 1023 aa14.4□□□□□ -0.1
HDAC7-228ENST00000548938 MCL1Q07820 350 aa14.4□□□□□ -0.1
HDAC7-228ENST00000548938 TRIM72Q6ZMU5 477 aa14.4□□□□□ -0.1
HDAC7-228ENST00000548938 CDAN1Q8IWY9 1227 aa14.4□□□□□ -0.1
HDAC7-228ENST00000548938 FAM151AQ8WW52 585 aa14.4□□□□□ -0.1
HDAC7-228ENST00000548938 BICD1Q96G01 975 aa14.4□□□□□ -0.1
HDAC7-228ENST00000548938 VCPIP1Q96JH7 1222 aa14.4□□□□□ -0.1
HDAC7-228ENST00000548938 MCEEQ96PE7 176 aa14.4□□□□□ -0.1
HDAC7-228ENST00000548938 FAM111AQ96PZ2 611 aa14.4□□□□□ -0.1
HDAC7-228ENST00000548938 ZNF184Q99676 751 aaPredicted RBP14.4□□□□□ -0.1
HDAC7-228ENST00000548938 TRIM4Q9C037 500 aa14.4□□□□□ -0.1
HDAC7-228ENST00000548938 NMUR2Q9GZQ4 415 aa14.4□□□□□ -0.1
HDAC7-228ENST00000548938 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.4□□□□□ -0.1
HDAC7-228ENST00000548938 MTO1Q9Y2Z2 717 aaKnown RBP14.4□□□□□ -0.1
HDAC7-228ENST00000548938 CNTNAP1P78357 1384 aa14.4□□□□□ -0.1
HDAC7-228ENST00000548938 LPXNO60711 386 aa14.39□□□□□ -0.11
HDAC7-228ENST00000548938 CCNE2O96020 404 aa14.39□□□□□ -0.11
HDAC7-228ENST00000548938 GSTA2P09210 222 aa14.39□□□□□ -0.11
HDAC7-228ENST00000548938 UBTFL6P0CB48 400 aaPredicted RBP14.39□□□□□ -0.11
HDAC7-228ENST00000548938 MYL2P10916 166 aa14.39□□□□□ -0.11
HDAC7-228ENST00000548938 TNNI1P19237 187 aa14.39□□□□□ -0.11
HDAC7-228ENST00000548938 ARL4CP56559 192 aa14.39□□□□□ -0.11
HDAC7-228ENST00000548938 C1QBPQ07021 282 aaKnown RBP14.39□□□□□ -0.11
HDAC7-228ENST00000548938 CUL2Q13617 745 aa14.39□□□□□ -0.11
HDAC7-228ENST00000548938 PRKD1Q15139 912 aaPredicted RBP14.39□□□□□ -0.11
HDAC7-228ENST00000548938 KLHL38Q2WGJ6 581 aa14.39□□□□□ -0.11
HDAC7-228ENST00000548938 ZACNQ401N2 412 aa14.39□□□□□ -0.11
HDAC7-228ENST00000548938 MTHFD1LQ6UB35 978 aa14.39□□□□□ -0.11
HDAC7-228ENST00000548938 ANO5Q75V66 913 aa14.39□□□□□ -0.11
HDAC7-228ENST00000548938 ALYREFQ86V81 257 aaKnown RBP14.39□□□□□ -0.11
HDAC7-228ENST00000548938 FBXO27Q8NI29 283 aa14.39□□□□□ -0.11
HDAC7-228ENST00000548938 FGD4Q96M96 766 aa14.39□□□□□ -0.11
HDAC7-228ENST00000548938 TRAPPC9Q96Q05 1148 aa14.39□□□□□ -0.11
HDAC7-228ENST00000548938 MMADHCQ9H3L0 296 aaPredicted RBP14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms