RNA–Protein interactions for RNA: ENST00000546202.5

PPP1CA-211, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 4

Gene PPP1CA, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-211ENST00000546202 CERS4Q9HA82 394 aa17.3■□□□□ 0.36
PPP1CA-211ENST00000546202 FAM49BQ9NUQ9 324 aa17.3■□□□□ 0.36
PPP1CA-211ENST00000546202 TMLHEQ9NVH6 421 aa17.3■□□□□ 0.36
PPP1CA-211ENST00000546202 GTF3C4Q9UKN8 822 aa17.3■□□□□ 0.36
PPP1CA-211ENST00000546202 PCDHGC3Q9UN70 934 aa17.3■□□□□ 0.36
PPP1CA-211ENST00000546202 WDR3Q9UNX4 943 aaKnown RBP eCLIP17.3■□□□□ 0.36
PPP1CA-211ENST00000546202 PLXNA3P51805 1871 aa17.29■□□□□ 0.36
PPP1CA-211ENST00000546202 PATJQ8NI35 1801 aa17.29■□□□□ 0.36
PPP1CA-211ENST00000546202 ADAM12O43184 909 aa17.29■□□□□ 0.36
PPP1CA-211ENST00000546202 OR4Q2P0C623 313 aa17.29■□□□□ 0.36
PPP1CA-211ENST00000546202 FMO1Q01740 532 aa17.29■□□□□ 0.36
PPP1CA-211ENST00000546202 SMARCB1Q12824 385 aa17.29■□□□□ 0.36
PPP1CA-211ENST00000546202 GPR17Q13304 367 aa17.29■□□□□ 0.36
PPP1CA-211ENST00000546202 SMC1AQ14683 1233 aaKnown RBP17.29■□□□□ 0.36
PPP1CA-211ENST00000546202 BMS1Q14692 1282 aaKnown RBP17.29■□□□□ 0.36
PPP1CA-211ENST00000546202 ASTE1Q2TB18 679 aaPredicted RBP17.29■□□□□ 0.36
PPP1CA-211ENST00000546202 PPP1R26Q5T8A7 1209 aaPredicted RBP17.29■□□□□ 0.36
PPP1CA-211ENST00000546202 PDE12Q6L8Q7 609 aaKnown RBP17.29■□□□□ 0.36
PPP1CA-211ENST00000546202 LCLAT1Q6UWP7 414 aa17.29■□□□□ 0.36
PPP1CA-211ENST00000546202 PAQR9Q6ZVX9 377 aa17.29■□□□□ 0.36
PPP1CA-211ENST00000546202 TMC7Q7Z402 723 aa17.29■□□□□ 0.36
PPP1CA-211ENST00000546202 FUKQ8N0W3 1084 aa17.29■□□□□ 0.36
PPP1CA-211ENST00000546202 CCDC112Q8NEF3 446 aa17.29■□□□□ 0.36
PPP1CA-211ENST00000546202 ARNTL2Q8WYA1 636 aa17.29■□□□□ 0.36
PPP1CA-211ENST00000546202 CYFIP2Q96F07 1278 aa17.29■□□□□ 0.36
PPP1CA-211ENST00000546202 PCED1BQ96HM7 432 aa17.29■□□□□ 0.36
PPP1CA-211ENST00000546202 B3GNT5Q9BYG0 378 aa17.29■□□□□ 0.36
PPP1CA-211ENST00000546202 LMAN2LQ9H0V9 348 aa17.29■□□□□ 0.36
PPP1CA-211ENST00000546202 NGRNQ9NPE2 291 aaKnown RBP17.29■□□□□ 0.36
PPP1CA-211ENST00000546202 CDY1Q9Y6F8 540 aa17.29■□□□□ 0.36
PPP1CA-211ENST00000546202 EPOPA6NHQ4 379 aa17.28■□□□□ 0.36
PPP1CA-211ENST00000546202 TNFRSF10AO00220 468 aa17.28■□□□□ 0.36
PPP1CA-211ENST00000546202 CXCL14O95715 111 aa17.28■□□□□ 0.36
PPP1CA-211ENST00000546202 MMEP08473 750 aa17.28■□□□□ 0.36
PPP1CA-211ENST00000546202 CFHP08603 1231 aa17.28■□□□□ 0.36
PPP1CA-211ENST00000546202 CCDC130P13994 396 aa17.28■□□□□ 0.36
PPP1CA-211ENST00000546202 RPL17P18621 184 aaKnown RBP17.28■□□□□ 0.36
PPP1CA-211ENST00000546202 OR1D2P34982 312 aa17.28■□□□□ 0.36
PPP1CA-211ENST00000546202 EIF4A3P38919 411 aaKnown RBP17.28■□□□□ 0.36
PPP1CA-211ENST00000546202 ROR1Q01973 937 aa17.28■□□□□ 0.36
PPP1CA-211ENST00000546202 NFE2Q16621 373 aaPredicted RBP17.28■□□□□ 0.36
PPP1CA-211ENST00000546202 SLC39A12Q504Y0 691 aa17.28■□□□□ 0.36
PPP1CA-211ENST00000546202 TJAP1Q5JTD0 557 aa17.28■□□□□ 0.36
PPP1CA-211ENST00000546202 TAF3Q5VWG9 929 aa17.28■□□□□ 0.36
PPP1CA-211ENST00000546202 MRPL43Q8N983 215 aaKnown RBP17.28■□□□□ 0.36
PPP1CA-211ENST00000546202 SLC30A5Q8TAD4 765 aa17.28■□□□□ 0.36
PPP1CA-211ENST00000546202 SLC2A14Q8TDB8 520 aa17.28■□□□□ 0.36
PPP1CA-211ENST00000546202 MYLPFQ96A32 169 aa17.28■□□□□ 0.36
PPP1CA-211ENST00000546202 NHEJ1Q9H9Q4 299 aaPredicted RBP17.28■□□□□ 0.36
PPP1CA-211ENST00000546202 ENTPD7Q9NQZ7 604 aa17.28■□□□□ 0.36
PPP1CA-211ENST00000546202 CHD9Q3L8U1 2897 aa17.28■□□□□ 0.36
PPP1CA-211ENST00000546202 MTCL1Q9Y4B5 1905 aaKnown RBP17.27■□□□□ 0.36
PPP1CA-211ENST00000546202 TMEM265A0A087WTH1 108 aa17.27■□□□□ 0.36
PPP1CA-211ENST00000546202 WDR27A2RRH5 827 aa17.27■□□□□ 0.36
PPP1CA-211ENST00000546202 C2orf71A6NGG8 1288 aa17.27■□□□□ 0.36
PPP1CA-211ENST00000546202 TEX28O15482 410 aa17.27■□□□□ 0.36
PPP1CA-211ENST00000546202 MICAL2O94851 1124 aa17.27■□□□□ 0.36
PPP1CA-211ENST00000546202 CNPP09543 421 aaKnown RBP17.27■□□□□ 0.36
PPP1CA-211ENST00000546202 CPB1P15086 417 aa17.27■□□□□ 0.36
PPP1CA-211ENST00000546202 TNFAIP3P21580 790 aa17.27■□□□□ 0.36
PPP1CA-211ENST00000546202 NDUFV1P49821 464 aa17.27■□□□□ 0.36
PPP1CA-211ENST00000546202 CCZ1BP86790 482 aa17.27■□□□□ 0.36
PPP1CA-211ENST00000546202 CCZ1P86791 482 aaPredicted RBP17.27■□□□□ 0.36
PPP1CA-211ENST00000546202 RAB33AQ14088 237 aa17.27■□□□□ 0.36
PPP1CA-211ENST00000546202 GOLGA7BQ2TAP0 167 aa17.27■□□□□ 0.36
PPP1CA-211ENST00000546202 PKDCCQ504Y2 493 aa17.27■□□□□ 0.36
PPP1CA-211ENST00000546202 TRIM72Q6ZMU5 477 aa17.27■□□□□ 0.36
PPP1CA-211ENST00000546202 C4orf50Q6ZRC1 276 aa17.27■□□□□ 0.36
PPP1CA-211ENST00000546202 FAM35AQ86V20 835 aa17.27■□□□□ 0.36
PPP1CA-211ENST00000546202 C2orf15Q8WU43 125 aaKnown RBP17.27■□□□□ 0.36
PPP1CA-211ENST00000546202 PCDHB18PQ96TA0 734 aa17.27■□□□□ 0.36
PPP1CA-211ENST00000546202 LHX5Q9H2C1 402 aa17.27■□□□□ 0.36
PPP1CA-211ENST00000546202 ABCB6Q9NP58 842 aa17.27■□□□□ 0.36
PPP1CA-211ENST00000546202 TSPAN16Q9UKR8 245 aa17.27■□□□□ 0.36
PPP1CA-211ENST00000546202 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP17.26■□□□□ 0.35
PPP1CA-211ENST00000546202 MTMR11A4FU01 709 aa17.26■□□□□ 0.35
PPP1CA-211ENST00000546202 CLDN5O00501 218 aa17.26■□□□□ 0.35
PPP1CA-211ENST00000546202 DDX3XO00571 662 aaKnown RBP eCLIP17.26■□□□□ 0.355e-11■■■■□ 22.8
PPP1CA-211ENST00000546202 ABLIM3O94929 683 aa17.26■□□□□ 0.35
PPP1CA-211ENST00000546202 VNN2O95498 520 aa17.26■□□□□ 0.35
PPP1CA-211ENST00000546202 CYP1A1P04798 512 aaPredicted RBP17.26■□□□□ 0.35
PPP1CA-211ENST00000546202 CDH5P33151 784 aaPredicted RBP17.26■□□□□ 0.35
PPP1CA-211ENST00000546202 IRS1P35568 1242 aa17.26■□□□□ 0.35
PPP1CA-211ENST00000546202 ARPP19P56211 112 aa17.26■□□□□ 0.35
PPP1CA-211ENST00000546202 CYP27A1Q02318 531 aa17.26■□□□□ 0.35
PPP1CA-211ENST00000546202 CFAP221Q4G0U5 840 aa17.26■□□□□ 0.35
PPP1CA-211ENST00000546202 PLPP4Q5VZY2 271 aa17.26■□□□□ 0.35
PPP1CA-211ENST00000546202 TPGS2Q68CL5 300 aa17.26■□□□□ 0.35
PPP1CA-211ENST00000546202 DENND1BQ6P3S1 775 aa17.26■□□□□ 0.35
PPP1CA-211ENST00000546202 RNF19BQ6ZMZ0 732 aa17.26■□□□□ 0.35
PPP1CA-211ENST00000546202 VPS36Q86VN1 386 aa17.26■□□□□ 0.35
PPP1CA-211ENST00000546202 TTC30AQ86WT1 665 aa17.26■□□□□ 0.35
PPP1CA-211ENST00000546202 GLYCTKQ8IVS8 523 aa17.26■□□□□ 0.35
PPP1CA-211ENST00000546202 CCDC170Q8IYT3 715 aa17.26■□□□□ 0.35
PPP1CA-211ENST00000546202 ANKRD52Q8NB46 1076 aa17.26■□□□□ 0.35
PPP1CA-211ENST00000546202 GDPD5Q8WTR4 605 aa17.26■□□□□ 0.35
PPP1CA-211ENST00000546202 FUBP3Q96I24 572 aaKnown RBP eCLIP17.26■□□□□ 0.35
PPP1CA-211ENST00000546202 CCDC42Q96M95 316 aa17.26■□□□□ 0.35
PPP1CA-211ENST00000546202 KLHL5Q96PQ7 755 aa17.26■□□□□ 0.35
PPP1CA-211ENST00000546202 ZNF518BQ9C0D4 1074 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms