RNA–Protein interactions for RNA: ENST00000541297.6

CLPTM1-202, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 2 BASIC

Gene CLPTM1, Length 2,732 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-202ENST00000541297 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.15■□□□□ 0.182e-9■□□□□ 8.2
CLPTM1-202ENST00000541297 MCM8Q9UJA3 840 aa16.15■□□□□ 0.18
CLPTM1-202ENST00000541297 AMFRQ9UKV5 643 aa16.15■□□□□ 0.18
CLPTM1-202ENST00000541297 SNX9Q9Y5X1 595 aa16.15■□□□□ 0.18
CLPTM1-202ENST00000541297 CYP1A2P05177 515 aa16.14■□□□□ 0.17
CLPTM1-202ENST00000541297 P4HA1P13674 534 aa16.14■□□□□ 0.17
CLPTM1-202ENST00000541297 CD52P31358 61 aa16.14■□□□□ 0.17
CLPTM1-202ENST00000541297 RAD23BP54727 409 aa16.14■□□□□ 0.17
CLPTM1-202ENST00000541297 YWHAEP62258 255 aaKnown RBP16.14■□□□□ 0.17
CLPTM1-202ENST00000541297 MYO1EQ12965 1108 aa16.14■□□□□ 0.17
CLPTM1-202ENST00000541297 AGBL2Q5U5Z8 902 aa16.14■□□□□ 0.17
CLPTM1-202ENST00000541297 RPAINQ86UA6 219 aa16.14■□□□□ 0.17
CLPTM1-202ENST00000541297 LPPQ93052 612 aa16.14■□□□□ 0.17
CLPTM1-202ENST00000541297 VRTNQ9H8Y1 702 aa16.14■□□□□ 0.17
CLPTM1-202ENST00000541297 DERAQ9Y315 318 aa16.14■□□□□ 0.17
CLPTM1-202ENST00000541297 SNCBQ16143 134 aa16.14■□□□□ 0.17
CLPTM1-202ENST00000541297 CEP57Q86XR8 500 aa16.14■□□□□ 0.17
CLPTM1-202ENST00000541297 CPNE8Q86YQ8 564 aa16.14■□□□□ 0.17
CLPTM1-202ENST00000541297 CACNA2D3Q8IZS8 1091 aa16.14■□□□□ 0.17
CLPTM1-202ENST00000541297 CALR3Q96L12 384 aaKnown RBP16.14■□□□□ 0.17
CLPTM1-202ENST00000541297 ELOVL4Q9GZR5 314 aa16.14■□□□□ 0.17
CLPTM1-202ENST00000541297 TRPV6Q9H1D0 765 aa16.14■□□□□ 0.17
CLPTM1-202ENST00000541297 STXBP5LQ9Y2K9 1186 aa16.14■□□□□ 0.17
CLPTM1-202ENST00000541297 TLR3O15455 904 aaKnown RBP16.13■□□□□ 0.17
CLPTM1-202ENST00000541297 TTI1O43156 1089 aa16.13■□□□□ 0.17
CLPTM1-202ENST00000541297 SCTRP47872 440 aa16.13■□□□□ 0.17
CLPTM1-202ENST00000541297 SOX4Q06945 474 aaPredicted RBP16.13■□□□□ 0.17
CLPTM1-202ENST00000541297 KRT71Q3SY84 523 aa16.13■□□□□ 0.17
CLPTM1-202ENST00000541297 MON1BQ7L1V2 547 aa16.13■□□□□ 0.17
CLPTM1-202ENST00000541297 TRIM7Q9C029 511 aa16.13■□□□□ 0.17
CLPTM1-202ENST00000541297 FAM105AQ9NUU6 356 aa16.13■□□□□ 0.17
CLPTM1-202ENST00000541297 ADAM22Q9P0K1 906 aa16.13■□□□□ 0.17
CLPTM1-202ENST00000541297 PADI3Q9ULW8 664 aa16.13■□□□□ 0.17
CLPTM1-202ENST00000541297 ALG6Q9Y672 507 aa16.13■□□□□ 0.17
CLPTM1-202ENST00000541297 A0A1W2PQ45 241 aaPredicted RBP16.13■□□□□ 0.17
CLPTM1-202ENST00000541297 A0A1W2PQY0 241 aa16.13■□□□□ 0.17
CLPTM1-202ENST00000541297 C5orf60A6NFR6 353 aa16.13■□□□□ 0.17
CLPTM1-202ENST00000541297 CILPO75339 1184 aa16.13■□□□□ 0.17
CLPTM1-202ENST00000541297 DHX9Q08211 1270 aaKnown RBP16.13■□□□□ 0.17
CLPTM1-202ENST00000541297 MTMR3Q13615 1198 aa16.13■□□□□ 0.17
CLPTM1-202ENST00000541297 WLSQ5T9L3 541 aa16.13■□□□□ 0.17
CLPTM1-202ENST00000541297 C9orf57Q5W0N0 161 aa16.13■□□□□ 0.17
CLPTM1-202ENST00000541297 TRIM72Q6ZMU5 477 aa16.13■□□□□ 0.17
CLPTM1-202ENST00000541297 TMC3Q7Z5M5 1100 aa16.13■□□□□ 0.17
CLPTM1-202ENST00000541297 SLC4A11Q8NBS3 891 aa16.13■□□□□ 0.17
CLPTM1-202ENST00000541297 MDM1Q8TC05 714 aa16.13■□□□□ 0.17
CLPTM1-202ENST00000541297 DPH5Q9H2P9 285 aa16.13■□□□□ 0.17
CLPTM1-202ENST00000541297 CACNG4Q9UBN1 327 aa16.13■□□□□ 0.17
CLPTM1-202ENST00000541297 UBQLN1Q9UMX0 589 aaKnown RBP16.13■□□□□ 0.17
CLPTM1-202ENST00000541297 CABYRO75952 493 aa16.12■□□□□ 0.17
CLPTM1-202ENST00000541297 PAEPP09466 180 aa16.12■□□□□ 0.17
CLPTM1-202ENST00000541297 AFF1P51825 1210 aaKnown RBP16.12■□□□□ 0.17
CLPTM1-202ENST00000541297 NDST1P52848 882 aa16.12■□□□□ 0.17
CLPTM1-202ENST00000541297 ARHGEF6Q15052 776 aa16.12■□□□□ 0.17
CLPTM1-202ENST00000541297 FBXO47Q5MNV8 452 aa16.12■□□□□ 0.17
CLPTM1-202ENST00000541297 ZNF618Q5T7W0 954 aa16.12■□□□□ 0.17
CLPTM1-202ENST00000541297 CPLX4Q7Z7G2 160 aa16.12■□□□□ 0.17
CLPTM1-202ENST00000541297 SGSM3Q96HU1 749 aa16.12■□□□□ 0.17
CLPTM1-202ENST00000541297 HES6Q96HZ4 224 aa16.12■□□□□ 0.17
CLPTM1-202ENST00000541297 STARD7Q9NQZ5 370 aa16.12■□□□□ 0.17
CLPTM1-202ENST00000541297 TPX2Q9ULW0 747 aaKnown RBP16.12■□□□□ 0.17
CLPTM1-202ENST00000541297 MOXD2PA6NHM9 499 aa16.12■□□□□ 0.17
CLPTM1-202ENST00000541297 GPR182O15218 404 aa16.12■□□□□ 0.17
CLPTM1-202ENST00000541297 GJB6O95452 261 aa16.12■□□□□ 0.17
CLPTM1-202ENST00000541297 MLH1P40692 756 aa16.12■□□□□ 0.17
CLPTM1-202ENST00000541297 HADHBP55084 474 aaKnown RBP16.12■□□□□ 0.17
CLPTM1-202ENST00000541297 PTK7Q13308 1070 aa16.12■□□□□ 0.17
CLPTM1-202ENST00000541297 GKAP1Q5VSY0 366 aaPredicted RBP16.12■□□□□ 0.17
CLPTM1-202ENST00000541297 TMEM176AQ96HP8 235 aa16.12■□□□□ 0.17
CLPTM1-202ENST00000541297 DONSONQ9NYP3 566 aa16.12■□□□□ 0.17
CLPTM1-202ENST00000541297 ANAPC7Q9UJX3 599 aa16.12■□□□□ 0.17
CLPTM1-202ENST00000541297 SUFUQ9UMX1 484 aa16.12■□□□□ 0.17
CLPTM1-202ENST00000541297 CCDC188H7C350 402 aa16.11■□□□□ 0.17
CLPTM1-202ENST00000541297 MGEA5O60502 916 aa16.11■□□□□ 0.17
CLPTM1-202ENST00000541297 COMTP21964 271 aa16.11■□□□□ 0.17
CLPTM1-202ENST00000541297 ELF1P32519 619 aa16.11■□□□□ 0.17
CLPTM1-202ENST00000541297 DENND1BQ6P3S1 775 aa16.11■□□□□ 0.17
CLPTM1-202ENST00000541297 RNF169Q8NCN4 708 aa16.11■□□□□ 0.17
CLPTM1-202ENST00000541297 HEXIM2Q96MH2 286 aaKnown RBP16.11■□□□□ 0.17
CLPTM1-202ENST00000541297 MRPL45Q9BRJ2 306 aaKnown RBP16.11■□□□□ 0.17
CLPTM1-202ENST00000541297 TRIM31Q9BZY9 425 aa16.11■□□□□ 0.17
CLPTM1-202ENST00000541297 CYP3A43Q9HB55 503 aa16.11■□□□□ 0.17
CLPTM1-202ENST00000541297 UVRAGQ9P2Y5 699 aa16.11■□□□□ 0.17
CLPTM1-202ENST00000541297 PTGESO14684 152 aa16.11■□□□□ 0.17
CLPTM1-202ENST00000541297 KCNE1P15382 129 aa16.11■□□□□ 0.17
CLPTM1-202ENST00000541297 DRD4P21917 467 aa16.11■□□□□ 0.17
CLPTM1-202ENST00000541297 PTPN11Q06124 597 aaPredicted RBP16.11■□□□□ 0.17
CLPTM1-202ENST00000541297 LPIN1Q14693 890 aa16.11■□□□□ 0.17
CLPTM1-202ENST00000541297 WDTC1Q8N5D0 677 aa16.11■□□□□ 0.17
CLPTM1-202ENST00000541297 TACO1Q9BSH4 297 aaKnown RBP16.11■□□□□ 0.17
CLPTM1-202ENST00000541297 SAGE1Q9NXZ1 904 aa16.11■□□□□ 0.17
CLPTM1-202ENST00000541297 BARX2Q9UMQ3 279 aaPredicted RBP16.11■□□□□ 0.17
CLPTM1-202ENST00000541297 MTA2O94776 668 aa16.1■□□□□ 0.17
CLPTM1-202ENST00000541297 STAU1O95793 577 aaKnown RBP16.1■□□□□ 0.17
CLPTM1-202ENST00000541297 MARCKSL1P49006 195 aa16.1■□□□□ 0.17
CLPTM1-202ENST00000541297 TCEAL1Q15170 157 aa16.1■□□□□ 0.17
CLPTM1-202ENST00000541297 LACTB2Q53H82 288 aaPredicted RBP16.1■□□□□ 0.17
CLPTM1-202ENST00000541297 XKR4Q5GH76 650 aa16.1■□□□□ 0.17
CLPTM1-202ENST00000541297 C11orf63Q6NUN7 778 aa16.1■□□□□ 0.17
CLPTM1-202ENST00000541297 PHF13Q86YI8 300 aaPredicted RBP16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms