RNA–Protein interactions for RNA: ENST00000541169.1

VPS33A-205, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 4

Gene VPS33A, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-205ENST00000541169 VNN2O95498 520 aa19.96■□□□□ 0.79
VPS33A-205ENST00000541169 ANXA13P27216 316 aa19.96■□□□□ 0.79
VPS33A-205ENST00000541169 TWF1Q12792 350 aa19.96■□□□□ 0.79
VPS33A-205ENST00000541169 LRMPQ12912 555 aa19.96■□□□□ 0.79
VPS33A-205ENST00000541169 STILQ15468 1287 aa19.96■□□□□ 0.79
VPS33A-205ENST00000541169 CLUL1Q15846 466 aa19.96■□□□□ 0.79
VPS33A-205ENST00000541169 TJAP1Q5JTD0 557 aa19.96■□□□□ 0.79
VPS33A-205ENST00000541169 PHLDB3Q6NSJ2 640 aa19.96■□□□□ 0.79
VPS33A-205ENST00000541169 ACOT1Q86TX2 421 aa19.96■□□□□ 0.79
VPS33A-205ENST00000541169 C12orf76Q8N812 135 aaPredicted RBP19.96■□□□□ 0.79
VPS33A-205ENST00000541169 MYLPFQ96A32 169 aa19.96■□□□□ 0.79
VPS33A-205ENST00000541169 SMARCD1Q96GM5 515 aa19.96■□□□□ 0.79
VPS33A-205ENST00000541169 SPATA17Q96L03 361 aa19.96■□□□□ 0.79
VPS33A-205ENST00000541169 HNRNPABQ99729 332 aaKnown RBP19.96■□□□□ 0.79
VPS33A-205ENST00000541169 PHF7Q9BWX1 381 aaPredicted RBP19.96■□□□□ 0.79
VPS33A-205ENST00000541169 UBE2TQ9NPD8 197 aaPredicted RBP19.96■□□□□ 0.79
VPS33A-205ENST00000541169 PRDM6Q9NQX0 595 aa19.96■□□□□ 0.79
VPS33A-205ENST00000541169 UTP3Q9NQZ2 479 aaKnown RBP eCLIP19.96■□□□□ 0.792e-6■■■■■ 149.1
VPS33A-205ENST00000541169 TMLHEQ9NVH6 421 aa19.96■□□□□ 0.79
VPS33A-205ENST00000541169 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP19.96■□□□□ 0.79
VPS33A-205ENST00000541169 CNTN6Q9UQ52 1028 aa19.96■□□□□ 0.79
VPS33A-205ENST00000541169 USTQ9Y2C2 406 aa19.96■□□□□ 0.79
VPS33A-205ENST00000541169 NR2E1Q9Y466 385 aa19.96■□□□□ 0.79
VPS33A-205ENST00000541169 ATP2C2O75185 946 aa19.95■□□□□ 0.78
VPS33A-205ENST00000541169 CSH1P0DML2 217 aa19.95■□□□□ 0.78
VPS33A-205ENST00000541169 CSH2P0DML3 217 aa19.95■□□□□ 0.78
VPS33A-205ENST00000541169 SLC9A1P19634 815 aa19.95■□□□□ 0.78
VPS33A-205ENST00000541169 SLC8A3P57103 927 aa19.95■□□□□ 0.78
VPS33A-205ENST00000541169 TAF12Q16514 161 aa19.95■□□□□ 0.78
VPS33A-205ENST00000541169 CYP4A22Q5TCH4 519 aa19.95■□□□□ 0.78
VPS33A-205ENST00000541169 WHAMMQ8TF30 809 aa19.95■□□□□ 0.78
VPS33A-205ENST00000541169 PSMG2Q969U7 264 aa19.95■□□□□ 0.78
VPS33A-205ENST00000541169 C8orf48Q96LL4 319 aa19.95■□□□□ 0.78
VPS33A-205ENST00000541169 HEXIM2Q96MH2 286 aaKnown RBP19.95■□□□□ 0.78
VPS33A-205ENST00000541169 ERGIC2Q96RQ1 377 aa19.95■□□□□ 0.78
VPS33A-205ENST00000541169 ARID3AQ99856 593 aa19.95■□□□□ 0.78
VPS33A-205ENST00000541169 DPEP3Q9H4B8 488 aa19.95■□□□□ 0.78
VPS33A-205ENST00000541169 UXTQ9UBK9 157 aaPredicted RBP19.95■□□□□ 0.78
VPS33A-205ENST00000541169 ZMYM5Q9UJ78 669 aa19.95■□□□□ 0.78
VPS33A-205ENST00000541169 SLC27A5Q9Y2P5 690 aa19.95■□□□□ 0.78
VPS33A-205ENST00000541169 CCL16O15467 120 aa19.94■□□□□ 0.78
VPS33A-205ENST00000541169 SERPINC1P01008 464 aa19.94■□□□□ 0.78
VPS33A-205ENST00000541169 BMP1P13497 986 aa19.94■□□□□ 0.78
VPS33A-205ENST00000541169 CYP2F1P24903 491 aa19.94■□□□□ 0.78
VPS33A-205ENST00000541169 RAD23BP54727 409 aa19.94■□□□□ 0.78
VPS33A-205ENST00000541169 UBXN1Q04323 297 aa19.94■□□□□ 0.78
VPS33A-205ENST00000541169 PABPC1LQ4VXU2 614 aaKnown RBP19.94■□□□□ 0.78
VPS33A-205ENST00000541169 OTOP3Q7RTS5 596 aa19.94■□□□□ 0.78
VPS33A-205ENST00000541169 LUZP1Q86V48 1076 aa19.94■□□□□ 0.78
VPS33A-205ENST00000541169 UBR7Q8N806 425 aa19.94■□□□□ 0.78
VPS33A-205ENST00000541169 ELMO3Q96BJ8 720 aa19.94■□□□□ 0.78
VPS33A-205ENST00000541169 CYFIP2Q96F07 1278 aa19.94■□□□□ 0.78
VPS33A-205ENST00000541169 MED10Q9BTT4 135 aa19.94■□□□□ 0.78
VPS33A-205ENST00000541169 B3GNT5Q9BYG0 378 aa19.94■□□□□ 0.78
VPS33A-205ENST00000541169 PNPLA8Q9NP80 782 aa19.94■□□□□ 0.78
VPS33A-205ENST00000541169 ASAH2Q9NR71 780 aa19.94■□□□□ 0.78
VPS33A-205ENST00000541169 PCDHB4Q9Y5E5 795 aa19.94■□□□□ 0.78
VPS33A-205ENST00000541169 REV3LO60673 3130 aa19.94■□□□□ 0.78
VPS33A-205ENST00000541169 CLUHO75153 1309 aa19.94■□□□□ 0.78
VPS33A-205ENST00000541169 SOBPA7XYQ1 873 aa19.93■□□□□ 0.78
VPS33A-205ENST00000541169 HCRTO43612 131 aa19.93■□□□□ 0.78
VPS33A-205ENST00000541169 TPM3P06753 285 aa19.93■□□□□ 0.78
VPS33A-205ENST00000541169 VDRP11473 427 aa19.93■□□□□ 0.78
VPS33A-205ENST00000541169 ACO1P21399 889 aaKnown RBP19.93■□□□□ 0.78
VPS33A-205ENST00000541169 GRIK1P39086 918 aa19.93■□□□□ 0.78
VPS33A-205ENST00000541169 EPHA5P54756 1037 aa19.93■□□□□ 0.78
VPS33A-205ENST00000541169 ARHGAP17Q68EM7 881 aa19.93■□□□□ 0.78
VPS33A-205ENST00000541169 TMEM270Q6UE05 265 aa19.93■□□□□ 0.78
VPS33A-205ENST00000541169 RRAGAQ7L523 313 aa19.93■□□□□ 0.78
VPS33A-205ENST00000541169 FMNL3Q8IVF7 1028 aa19.93■□□□□ 0.78
VPS33A-205ENST00000541169 ARHGEF19Q8IW93 802 aa19.93■□□□□ 0.78
VPS33A-205ENST00000541169 PLCD3Q8N3E9 789 aa19.93■□□□□ 0.78
VPS33A-205ENST00000541169 ACSF2Q96CM8 615 aaPredicted RBP19.93■□□□□ 0.78
VPS33A-205ENST00000541169 TRMT2BQ96GJ1 504 aaKnown RBP19.93■□□□□ 0.78
VPS33A-205ENST00000541169 APOL5Q9BWW9 433 aa19.93■□□□□ 0.78
VPS33A-205ENST00000541169 CRISPLD1Q9H336 500 aa19.93■□□□□ 0.78
VPS33A-205ENST00000541169 DMAP1Q9NPF5 467 aaPredicted RBP19.93■□□□□ 0.78
VPS33A-205ENST00000541169 COMMD8Q9NX08 183 aa19.93■□□□□ 0.78
VPS33A-205ENST00000541169 NME7Q9Y5B8 376 aa19.93■□□□□ 0.78
VPS33A-205ENST00000541169 PTPRDP23468 1912 aa19.92■□□□□ 0.78
VPS33A-205ENST00000541169 COL6A3P12111 3177 aa19.92■□□□□ 0.78
VPS33A-205ENST00000541169 FAM200BP0CF97 657 aa19.92■□□□□ 0.78
VPS33A-205ENST00000541169 ATP1A3P13637 1013 aa19.92■□□□□ 0.78
VPS33A-205ENST00000541169 BDNFP23560 247 aa19.92■□□□□ 0.78
VPS33A-205ENST00000541169 PPP3CCP48454 512 aa19.92■□□□□ 0.78
VPS33A-205ENST00000541169 BPIFB4P59827 614 aa19.92■□□□□ 0.78
VPS33A-205ENST00000541169 MEA1Q16626 185 aa19.92■□□□□ 0.78
VPS33A-205ENST00000541169 SGO2Q562F6 1265 aa19.92■□□□□ 0.78
VPS33A-205ENST00000541169 KLHDC7AQ5VTJ3 777 aa19.92■□□□□ 0.78
VPS33A-205ENST00000541169 PDZD4Q76G19 769 aaPredicted RBP19.92■□□□□ 0.78
VPS33A-205ENST00000541169 APTXQ7Z2E3 356 aaKnown RBP19.92■□□□□ 0.78
VPS33A-205ENST00000541169 DNAJB7Q7Z6W7 309 aaPredicted RBP19.92■□□□□ 0.78
VPS33A-205ENST00000541169 FAM35AQ86V20 835 aa19.92■□□□□ 0.78
VPS33A-205ENST00000541169 ADHFE1Q8IWW8 467 aa19.92■□□□□ 0.78
VPS33A-205ENST00000541169 FUKQ8N0W3 1084 aa19.92■□□□□ 0.78
VPS33A-205ENST00000541169 SLC4A11Q8NBS3 891 aa19.92■□□□□ 0.78
VPS33A-205ENST00000541169 MYRFLQ96LU7 910 aa19.92■□□□□ 0.78
VPS33A-205ENST00000541169 UBXN6Q9BZV1 441 aa19.92■□□□□ 0.78
VPS33A-205ENST00000541169 GPR88Q9GZN0 384 aa19.92■□□□□ 0.78
VPS33A-205ENST00000541169 CSNK1G1Q9HCP0 422 aa19.92■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms