RNA–Protein interactions for RNA: ENST00000541122.6

SMARCA4-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS P4 TSL 5 BASIC

Gene SMARCA4, Length 5,139 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-207ENST00000541122 ZC2HC1CQ53FD0 456 aaPredicted RBP15.55■□□□□ 0.08
SMARCA4-207ENST00000541122 SEL1L3Q68CR1 1132 aa15.55■□□□□ 0.08
SMARCA4-207ENST00000541122 RNF43Q68DV7 783 aa15.55■□□□□ 0.08
SMARCA4-207ENST00000541122 NAPEPLDQ6IQ20 393 aa15.55■□□□□ 0.08
SMARCA4-207ENST00000541122 RRM2BQ7LG56 351 aa15.55■□□□□ 0.08
SMARCA4-207ENST00000541122 RMND5BQ96G75 393 aaPredicted RBP15.55■□□□□ 0.08
SMARCA4-207ENST00000541122 NIF3L1Q9GZT8 377 aa15.55■□□□□ 0.08
SMARCA4-207ENST00000541122 RAVER2Q9HCJ3 691 aaKnown RBP15.55■□□□□ 0.08
SMARCA4-207ENST00000541122 CNGB3Q9NQW8 809 aa15.55■□□□□ 0.08
SMARCA4-207ENST00000541122 CAB39Q9Y376 341 aaPredicted RBP15.55■□□□□ 0.08
SMARCA4-207ENST00000541122 COMMD3-BMI1R4GMX3 469 aa15.55■□□□□ 0.08
SMARCA4-207ENST00000541122 LRRC10BA6NIK2 292 aa15.55■□□□□ 0.08
SMARCA4-207ENST00000541122 NBPF26B4DH59 902 aa15.55■□□□□ 0.08
SMARCA4-207ENST00000541122 FCHO1O14526 889 aa15.55■□□□□ 0.08
SMARCA4-207ENST00000541122 EPHB2P29323 1055 aa15.55■□□□□ 0.08
SMARCA4-207ENST00000541122 SSTR3P32745 418 aaPredicted RBP15.55■□□□□ 0.08
SMARCA4-207ENST00000541122 SOX6P35712 828 aa15.55■□□□□ 0.08
SMARCA4-207ENST00000541122 ATP6V1E1P36543 226 aa15.55■□□□□ 0.08
SMARCA4-207ENST00000541122 SLC45A4Q5BKX6 768 aa15.55■□□□□ 0.08
SMARCA4-207ENST00000541122 B3GNT6Q6ZMB0 384 aa15.55■□□□□ 0.08
SMARCA4-207ENST00000541122 C16orf86Q6ZW13 317 aa15.55■□□□□ 0.08
SMARCA4-207ENST00000541122 SYNE4Q8N205 404 aa15.55■□□□□ 0.08
SMARCA4-207ENST00000541122 NBPF15Q8N660 670 aa15.55■□□□□ 0.08
SMARCA4-207ENST00000541122 AGAP11Q8TF27 550 aa15.55■□□□□ 0.08
SMARCA4-207ENST00000541122 CELF1Q92879 486 aaKnown RBP15.55■□□□□ 0.08
SMARCA4-207ENST00000541122 OXNAD1Q96HP4 312 aaPredicted RBP15.55■□□□□ 0.08
SMARCA4-207ENST00000541122 FOXN3O00409 490 aaPredicted RBP15.54■□□□□ 0.08
SMARCA4-207ENST00000541122 PSMG1O95456 288 aa15.54■□□□□ 0.08
SMARCA4-207ENST00000541122 CYP19A1P11511 503 aaPredicted RBP15.54■□□□□ 0.08
SMARCA4-207ENST00000541122 RAB14P61106 215 aa15.54■□□□□ 0.08
SMARCA4-207ENST00000541122 XRCC4Q13426 336 aa15.54■□□□□ 0.08
SMARCA4-207ENST00000541122 MYBPC2Q14324 1141 aa15.54■□□□□ 0.08
SMARCA4-207ENST00000541122 SMAD1Q15797 465 aaKnown RBP15.54■□□□□ 0.08
SMARCA4-207ENST00000541122 FAM83EQ2M2I3 478 aa15.54■□□□□ 0.08
SMARCA4-207ENST00000541122 SYCP2LQ5T4T6 812 aa15.54■□□□□ 0.08
SMARCA4-207ENST00000541122 PDPK2PQ6A1A2 396 aa15.54■□□□□ 0.08
SMARCA4-207ENST00000541122 MAGEC3Q8TD91 643 aa15.54■□□□□ 0.08
SMARCA4-207ENST00000541122 ATG4AQ8WYN0 398 aa15.54■□□□□ 0.08
SMARCA4-207ENST00000541122 NYAP2Q9P242 653 aa15.54■□□□□ 0.08
SMARCA4-207ENST00000541122 STARD13Q9Y3M8 1113 aa15.54■□□□□ 0.08
SMARCA4-207ENST00000541122 PRR23D1E9PI22 279 aaPredicted RBP15.54■□□□□ 0.08
SMARCA4-207ENST00000541122 ZSCAN9O15535 394 aaPredicted RBP15.54■□□□□ 0.08
SMARCA4-207ENST00000541122 SNX3O60493 162 aa15.54■□□□□ 0.08
SMARCA4-207ENST00000541122 PRR23D2P0DMB1 279 aaPredicted RBP15.54■□□□□ 0.08
SMARCA4-207ENST00000541122 RBP5P82980 135 aa15.54■□□□□ 0.08
SMARCA4-207ENST00000541122 ERMARDQ5T6L9 678 aa15.54■□□□□ 0.08
SMARCA4-207ENST00000541122 ZBTB49Q6ZSB9 765 aa15.54■□□□□ 0.08
SMARCA4-207ENST00000541122 ZNF669Q96BR6 464 aaPredicted RBP15.54■□□□□ 0.08
SMARCA4-207ENST00000541122 ATAD3AQ9NVI7 634 aa15.54■□□□□ 0.08
SMARCA4-207ENST00000541122 ACTL7BQ9Y614 415 aa15.54■□□□□ 0.08
SMARCA4-207ENST00000541122 MYO1GB0I1T2 1018 aa15.54■□□□□ 0.08
SMARCA4-207ENST00000541122 ZBTB39O15060 712 aa15.54■□□□□ 0.08
SMARCA4-207ENST00000541122 PROSCO94903 275 aa15.54■□□□□ 0.08
SMARCA4-207ENST00000541122 PRKCBP05771 671 aa15.54■□□□□ 0.08
SMARCA4-207ENST00000541122 ACADSBP45954 432 aa15.54■□□□□ 0.08
SMARCA4-207ENST00000541122 PTK2BQ14289 1009 aa15.54■□□□□ 0.08
SMARCA4-207ENST00000541122 LINC00523Q86TU6 105 aa15.54■□□□□ 0.08
SMARCA4-207ENST00000541122 ZNF408Q9H9D4 720 aa15.54■□□□□ 0.08
SMARCA4-207ENST00000541122 PCDH9Q9HC56 1237 aa15.54■□□□□ 0.08
SMARCA4-207ENST00000541122 HOXC10Q9NYD6 342 aa15.54■□□□□ 0.08
SMARCA4-207ENST00000541122 COL15A1P39059 1388 aa15.54■□□□□ 0.08
SMARCA4-207ENST00000541122 RPS6KA4O75676 772 aa15.54■□□□□ 0.08
SMARCA4-207ENST00000541122 WFS1O76024 890 aa15.54■□□□□ 0.08
SMARCA4-207ENST00000541122 KYQ8NBH2 561 aa15.54■□□□□ 0.08
SMARCA4-207ENST00000541122 C17orf75Q9HAS0 396 aa15.54■□□□□ 0.08
SMARCA4-207ENST00000541122 EXOSC4Q9NPD3 245 aaKnown RBP15.54■□□□□ 0.08
SMARCA4-207ENST00000541122 FAM237AA0A1B0GTK4 181 aa15.53■□□□□ 0.08
SMARCA4-207ENST00000541122 IL18RAPO95256 599 aa15.53■□□□□ 0.08
SMARCA4-207ENST00000541122 BCL10O95999 233 aa15.53■□□□□ 0.08
SMARCA4-207ENST00000541122 BGNP21810 368 aa15.53■□□□□ 0.08
SMARCA4-207ENST00000541122 MKRN4PQ13434 485 aaPredicted RBP15.53■□□□□ 0.08
SMARCA4-207ENST00000541122 ZNF235Q14590 738 aa15.53■□□□□ 0.08
SMARCA4-207ENST00000541122 AGAP3Q96P47 875 aa15.53■□□□□ 0.08
SMARCA4-207ENST00000541122 C17orf80Q9BSJ5 609 aa15.53■□□□□ 0.08
SMARCA4-207ENST00000541122 TMEM245Q9H330 911 aa15.53■□□□□ 0.08
SMARCA4-207ENST00000541122 NARFQ9UHQ1 456 aa15.53■□□□□ 0.08
SMARCA4-207ENST00000541122 SMIM31A0A1B0GVY4 71 aa15.53■□□□□ 0.08
SMARCA4-207ENST00000541122 UNC5CO95185 931 aa15.53■□□□□ 0.08
SMARCA4-207ENST00000541122 RALBP11234 206 aa15.53■□□□□ 0.08
SMARCA4-207ENST00000541122 TPP2P29144 1249 aaPredicted RBP15.53■□□□□ 0.08
SMARCA4-207ENST00000541122 CDK16Q00536 496 aa15.53■□□□□ 0.08
SMARCA4-207ENST00000541122 GPAT2Q6NUI2 795 aa15.53■□□□□ 0.08
SMARCA4-207ENST00000541122 EEPD1Q7L9B9 569 aa15.53■□□□□ 0.08
SMARCA4-207ENST00000541122 ZNF398Q8TD17 642 aa15.53■□□□□ 0.08
SMARCA4-207ENST00000541122 CKAP2Q8WWK9 683 aa15.53■□□□□ 0.08
SMARCA4-207ENST00000541122 DCPSQ96C86 337 aaKnown RBP15.53■□□□□ 0.08
SMARCA4-207ENST00000541122 DIABLOQ9NR28 239 aa15.53■□□□□ 0.08
SMARCA4-207ENST00000541122 TMEM94Q12767 1356 aa15.53■□□□□ 0.08
SMARCA4-207ENST00000541122 IGSF9BQ9UPX0 1349 aa15.53■□□□□ 0.08
SMARCA4-207ENST00000541122 DFFAO00273 331 aa15.53■□□□□ 0.08
SMARCA4-207ENST00000541122 C4BPBP20851 252 aa15.53■□□□□ 0.08
SMARCA4-207ENST00000541122 SERPINB5P36952 375 aa15.53■□□□□ 0.08
SMARCA4-207ENST00000541122 FOXD4Q12950 439 aaPredicted RBP15.53■□□□□ 0.08
SMARCA4-207ENST00000541122 FAM196AQ6ZSG2 479 aa15.53■□□□□ 0.08
SMARCA4-207ENST00000541122 BBS7Q8IWZ6 715 aa15.53■□□□□ 0.08
SMARCA4-207ENST00000541122 ZNF23P17027 643 aa15.53■□□□□ 0.08
SMARCA4-207ENST00000541122 TTKP33981 857 aa15.53■□□□□ 0.08
SMARCA4-207ENST00000541122 LDHDQ86WU2 507 aa15.53■□□□□ 0.08
SMARCA4-207ENST00000541122 TMEM79Q9BSE2 394 aa15.53■□□□□ 0.08
SMARCA4-207ENST00000541122 SHCBP1LQ9BZQ2 653 aa15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms