RNA–Protein interactions for RNA: ENST00000540022.5

TNFRSF1A-213, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1A, Length 1,527 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-213ENST00000540022 DDX3XO00571 662 aaKnown RBP eCLIP20.08■□□□□ 0.813e-9■■□□□ 12.9
TNFRSF1A-213ENST00000540022 URODP06132 367 aa20.08■□□□□ 0.81
TNFRSF1A-213ENST00000540022 CTSAP10619 480 aa20.08■□□□□ 0.81
TNFRSF1A-213ENST00000540022 DEKP35659 375 aaKnown RBP20.08■□□□□ 0.81
TNFRSF1A-213ENST00000540022 TSPY1Q01534 308 aa20.08■□□□□ 0.81
TNFRSF1A-213ENST00000540022 CNGA2Q16280 664 aa20.08■□□□□ 0.81
TNFRSF1A-213ENST00000540022 ARHGAP17Q68EM7 881 aa20.08■□□□□ 0.81
TNFRSF1A-213ENST00000540022 PALB2Q86YC2 1186 aa20.08■□□□□ 0.81
TNFRSF1A-213ENST00000540022 MYCBPAPQ8TBZ2 947 aa20.08■□□□□ 0.81
TNFRSF1A-213ENST00000540022 AUTS2Q8WXX7 1259 aa20.08■□□□□ 0.81
TNFRSF1A-213ENST00000540022 CCDC42Q96M95 316 aa20.08■□□□□ 0.81
TNFRSF1A-213ENST00000540022 PCDHB18PQ96TA0 734 aa20.08■□□□□ 0.81
TNFRSF1A-213ENST00000540022 C11orf84Q9BUA3 381 aaPredicted RBP20.08■□□□□ 0.81
TNFRSF1A-213ENST00000540022 TMLHEQ9NVH6 421 aa20.08■□□□□ 0.81
TNFRSF1A-213ENST00000540022 ADAMTS1Q9UHI8 967 aa20.08■□□□□ 0.81
TNFRSF1A-213ENST00000540022 WDR3Q9UNX4 943 aaKnown RBP eCLIP20.08■□□□□ 0.81
TNFRSF1A-213ENST00000540022 BACE2Q9Y5Z0 518 aa20.08■□□□□ 0.81
TNFRSF1A-213ENST00000540022 MTCH2Q9Y6C9 303 aa20.08■□□□□ 0.81
TNFRSF1A-213ENST00000540022 ATG2AQ2TAZ0 1938 aa20.08■□□□□ 0.8
TNFRSF1A-213ENST00000540022 A0A087X0T9 212 aa20.07■□□□□ 0.8
TNFRSF1A-213ENST00000540022 OR6C75A6NL08 312 aa20.07■□□□□ 0.8
TNFRSF1A-213ENST00000540022 H3BNC9 293 aa20.07■□□□□ 0.8
TNFRSF1A-213ENST00000540022 MED7O43513 233 aa20.07■□□□□ 0.8
TNFRSF1A-213ENST00000540022 FAM228BP0C875 321 aa20.07■□□□□ 0.8
TNFRSF1A-213ENST00000540022 RPL17P18621 184 aaKnown RBP20.07■□□□□ 0.8
TNFRSF1A-213ENST00000540022 TNFAIP3P21580 790 aa20.07■□□□□ 0.8
TNFRSF1A-213ENST00000540022 GPM6BQ13491 265 aa20.07■□□□□ 0.8
TNFRSF1A-213ENST00000540022 CAMK1Q14012 370 aa20.07■□□□□ 0.8
TNFRSF1A-213ENST00000540022 CCDC85BQ15834 202 aaPredicted RBP20.07■□□□□ 0.8
TNFRSF1A-213ENST00000540022 FUKQ8N0W3 1084 aa20.07■□□□□ 0.8
TNFRSF1A-213ENST00000540022 SLC30A5Q8TAD4 765 aa20.07■□□□□ 0.8
TNFRSF1A-213ENST00000540022 SLC2A14Q8TDB8 520 aa20.07■□□□□ 0.8
TNFRSF1A-213ENST00000540022 POF1BQ8WVV4 589 aa20.07■□□□□ 0.8
TNFRSF1A-213ENST00000540022 PCED1BQ96HM7 432 aa20.07■□□□□ 0.8
TNFRSF1A-213ENST00000540022 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP20.07■□□□□ 0.86e-7■□□□□ 9.6
TNFRSF1A-213ENST00000540022 B3GNT5Q9BYG0 378 aa20.07■□□□□ 0.8
TNFRSF1A-213ENST00000540022 DEF6Q9H4E7 631 aa20.07■□□□□ 0.8
TNFRSF1A-213ENST00000540022 TSPAN16Q9UKR8 245 aa20.07■□□□□ 0.8
TNFRSF1A-213ENST00000540022 PCDHGC3Q9UN70 934 aa20.07■□□□□ 0.8
TNFRSF1A-213ENST00000540022 ADAM12O43184 909 aa20.07■□□□□ 0.8
TNFRSF1A-213ENST00000540022 LILRB3O75022 631 aa20.07■□□□□ 0.8
TNFRSF1A-213ENST00000540022 MICAL2O94851 1124 aa20.07■□□□□ 0.8
TNFRSF1A-213ENST00000540022 KIF11P52732 1056 aa20.07■□□□□ 0.8
TNFRSF1A-213ENST00000540022 ERVFC1P60507 584 aa20.07■□□□□ 0.8
TNFRSF1A-213ENST00000540022 BMS1Q14692 1282 aaKnown RBP20.07■□□□□ 0.8
TNFRSF1A-213ENST00000540022 PTPN14Q15678 1187 aa20.07■□□□□ 0.8
TNFRSF1A-213ENST00000540022 SLC8B1Q6J4K2 584 aa20.07■□□□□ 0.8
TNFRSF1A-213ENST00000540022 LCLAT1Q6UWP7 414 aa20.07■□□□□ 0.8
TNFRSF1A-213ENST00000540022 PAQR9Q6ZVX9 377 aa20.07■□□□□ 0.8
TNFRSF1A-213ENST00000540022 PASD1Q8IV76 773 aa20.07■□□□□ 0.8
TNFRSF1A-213ENST00000540022 GPR65Q8IYL9 337 aa20.07■□□□□ 0.8
TNFRSF1A-213ENST00000540022 CCDC170Q8IYT3 715 aa20.07■□□□□ 0.8
TNFRSF1A-213ENST00000540022 HNRNPABQ99729 332 aaKnown RBP20.07■□□□□ 0.8
TNFRSF1A-213ENST00000540022 CLSTN3Q9BQT9 956 aa20.07■□□□□ 0.8
TNFRSF1A-213ENST00000540022 OXCT2Q9BYC2 517 aaPredicted RBP20.07■□□□□ 0.8
TNFRSF1A-213ENST00000540022 PRDM6Q9NQX0 595 aa20.07■□□□□ 0.8
TNFRSF1A-213ENST00000540022 MRPL17Q9NRX2 175 aaKnown RBP20.07■□□□□ 0.8
TNFRSF1A-213ENST00000540022 SPTLC3Q9NUV7 552 aa20.07■□□□□ 0.8
TNFRSF1A-213ENST00000540022 SEPT11Q9NVA2 429 aaKnown RBP20.07■□□□□ 0.8
TNFRSF1A-213ENST00000540022 PCDHGC5Q9Y5F6 944 aa20.07■□□□□ 0.8
TNFRSF1A-213ENST00000540022 CDY1Q9Y6F8 540 aa20.07■□□□□ 0.8
TNFRSF1A-213ENST00000540022 VWA8A3KMH1 1905 aa20.06■□□□□ 0.8
TNFRSF1A-213ENST00000540022 CLDN5O00501 218 aa20.06■□□□□ 0.8
TNFRSF1A-213ENST00000540022 AKR1B10O60218 316 aa20.06■□□□□ 0.8
TNFRSF1A-213ENST00000540022 ADORA2BP29275 332 aa20.06■□□□□ 0.8
TNFRSF1A-213ENST00000540022 ARPP19P56211 112 aa20.06■□□□□ 0.8
TNFRSF1A-213ENST00000540022 UBE3AQ05086 875 aa20.06■□□□□ 0.8
TNFRSF1A-213ENST00000540022 GFPT1Q06210 699 aaPredicted RBP20.06■□□□□ 0.8
TNFRSF1A-213ENST00000540022 STILQ15468 1287 aa20.06■□□□□ 0.8
TNFRSF1A-213ENST00000540022 GOLGA7BQ2TAP0 167 aa20.06■□□□□ 0.8
TNFRSF1A-213ENST00000540022 SLC39A12Q504Y0 691 aa20.06■□□□□ 0.8
TNFRSF1A-213ENST00000540022 DENND1BQ6P3S1 775 aa20.06■□□□□ 0.8
TNFRSF1A-213ENST00000540022 TMC7Q7Z402 723 aa20.06■□□□□ 0.8
TNFRSF1A-213ENST00000540022 VPS36Q86VN1 386 aa20.06■□□□□ 0.8
TNFRSF1A-213ENST00000540022 DCP1BQ8IZD4 617 aaKnown RBP20.06■□□□□ 0.8
TNFRSF1A-213ENST00000540022 MYLPFQ96A32 169 aa20.06■□□□□ 0.8
TNFRSF1A-213ENST00000540022 TCF25Q9BQ70 676 aa20.06■□□□□ 0.8
TNFRSF1A-213ENST00000540022 PDCL3Q9H2J4 239 aa20.06■□□□□ 0.8
TNFRSF1A-213ENST00000540022 EPN1Q9Y6I3 576 aaPredicted RBP20.06■□□□□ 0.8
TNFRSF1A-213ENST00000540022 FAM170AA1A519 330 aa20.05■□□□□ 0.8
TNFRSF1A-213ENST00000540022 ARHGAP6O43182 974 aa20.05■□□□□ 0.8
TNFRSF1A-213ENST00000540022 NRDCO43847 1150 aa20.05■□□□□ 0.8
TNFRSF1A-213ENST00000540022 CPB1P15086 417 aa20.05■□□□□ 0.8
TNFRSF1A-213ENST00000540022 ANXA13P27216 316 aa20.05■□□□□ 0.8
TNFRSF1A-213ENST00000540022 OR1D2P34982 312 aa20.05■□□□□ 0.8
TNFRSF1A-213ENST00000540022 CYP27A1Q02318 531 aa20.05■□□□□ 0.8
TNFRSF1A-213ENST00000540022 MAPRE1Q15691 268 aaKnown RBP20.05■□□□□ 0.8
TNFRSF1A-213ENST00000540022 SLC18A3Q16572 532 aa20.05■□□□□ 0.8
TNFRSF1A-213ENST00000540022 PKDCCQ504Y2 493 aa20.05■□□□□ 0.8
TNFRSF1A-213ENST00000540022 TTC30AQ86WT1 665 aa20.05■□□□□ 0.8
TNFRSF1A-213ENST00000540022 MICALL1Q8N3F8 863 aa20.05■□□□□ 0.8
TNFRSF1A-213ENST00000540022 UBA3Q8TBC4 463 aa20.05■□□□□ 0.8
TNFRSF1A-213ENST00000540022 ZNF518BQ9C0D4 1074 aa20.05■□□□□ 0.8
TNFRSF1A-213ENST00000540022 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP20.05■□□□□ 0.8
TNFRSF1A-213ENST00000540022 M0QYV0 167 aa20.04■□□□□ 0.8
TNFRSF1A-213ENST00000540022 ZNF263O14978 683 aa20.04■□□□□ 0.8
TNFRSF1A-213ENST00000540022 NDUFA10O95299 355 aa20.04■□□□□ 0.8
TNFRSF1A-213ENST00000540022 CXCL14O95715 111 aa20.04■□□□□ 0.8
TNFRSF1A-213ENST00000540022 CYP1A1P04798 512 aaPredicted RBP20.04■□□□□ 0.8
TNFRSF1A-213ENST00000540022 IRS1P35568 1242 aa20.04■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms