RNA–Protein interactions for RNA: ENST00000539548.6

CDH13-204, Transcript of cadherin 13, humanhuman

TSL 2

Gene CDH13, Length 2,199 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-204ENST00000539548 GOLGA8SH3BPF8 625 aa10.15□□□□□ -0.79
CDH13-204ENST00000539548 GOLGA8MH3BSY2 632 aa10.15□□□□□ -0.79
CDH13-204ENST00000539548 K7ERI5 159 aa10.15□□□□□ -0.79
CDH13-204ENST00000539548 DNAJC6O75061 913 aa10.15□□□□□ -0.79
CDH13-204ENST00000539548 ENTPD5O75356 428 aa10.15□□□□□ -0.79
CDH13-204ENST00000539548 TGDSO95455 350 aa10.15□□□□□ -0.79
CDH13-204ENST00000539548 ACADSP16219 412 aa10.15□□□□□ -0.79
CDH13-204ENST00000539548 CDH5P33151 784 aaPredicted RBP10.15□□□□□ -0.79
CDH13-204ENST00000539548 PCK1P35558 622 aa10.15□□□□□ -0.79
CDH13-204ENST00000539548 CCNHP51946 323 aaPredicted RBP10.15□□□□□ -0.79
CDH13-204ENST00000539548 AP3M2P53677 418 aa10.15□□□□□ -0.79
CDH13-204ENST00000539548 EMC2Q15006 297 aa10.15□□□□□ -0.79
CDH13-204ENST00000539548 TAZQ16635 292 aa10.15□□□□□ -0.79
CDH13-204ENST00000539548 TSNAXIP1Q2TAA8 658 aa10.15□□□□□ -0.79
CDH13-204ENST00000539548 ANKRD22Q5VYY1 191 aa10.15□□□□□ -0.79
CDH13-204ENST00000539548 SMYD5Q6GMV2 418 aa10.15□□□□□ -0.79
CDH13-204ENST00000539548 APLFQ8IW19 511 aaPredicted RBP10.15□□□□□ -0.79
CDH13-204ENST00000539548 CCDC60Q8IWA6 550 aaPredicted RBP10.15□□□□□ -0.79
CDH13-204ENST00000539548 RFWD2Q8NHY2 731 aa10.15□□□□□ -0.79
CDH13-204ENST00000539548 NSL1Q96IY1 281 aa10.15□□□□□ -0.79
CDH13-204ENST00000539548 MIPEPQ99797 713 aa10.15□□□□□ -0.79
CDH13-204ENST00000539548 MSTO1Q9BUK6 570 aa10.15□□□□□ -0.79
CDH13-204ENST00000539548 ADAM33Q9BZ11 813 aa10.15□□□□□ -0.79
CDH13-204ENST00000539548 ADGRA2Q96PE1 1338 aa10.14□□□□□ -0.79
CDH13-204ENST00000539548 WDR91A4D1P6 747 aa10.14□□□□□ -0.79
CDH13-204ENST00000539548 GSC2O15499 205 aa10.14□□□□□ -0.79
CDH13-204ENST00000539548 RAD17O75943 681 aa10.14□□□□□ -0.79
CDH13-204ENST00000539548 RGS20O76081 388 aa10.14□□□□□ -0.79
CDH13-204ENST00000539548 ASS1P00966 412 aaKnown RBP10.14□□□□□ -0.79
CDH13-204ENST00000539548 IL1BP01584 269 aa10.14□□□□□ -0.79
CDH13-204ENST00000539548 LINGO3P0C6S8 592 aa10.14□□□□□ -0.79
CDH13-204ENST00000539548 DHRS4L1P0CG22 281 aa10.14□□□□□ -0.79
CDH13-204ENST00000539548 RPL22P35268 128 aaKnown RBP10.14□□□□□ -0.79
CDH13-204ENST00000539548 NAMPTP43490 491 aa10.14□□□□□ -0.79
CDH13-204ENST00000539548 ACTR2P61160 394 aa10.14□□□□□ -0.79
CDH13-204ENST00000539548 MRPS35P82673 323 aaKnown RBP10.14□□□□□ -0.79
CDH13-204ENST00000539548 OTUD4Q01804 1114 aaKnown RBP10.14□□□□□ -0.79
CDH13-204ENST00000539548 GAD2Q05329 585 aa10.14□□□□□ -0.79
CDH13-204ENST00000539548 EFTUD2Q15029 972 aaKnown RBP eCLIP10.14□□□□□ -0.79
CDH13-204ENST00000539548 MTERF2Q49AM1 385 aa10.14□□□□□ -0.79
CDH13-204ENST00000539548 ZBTB41Q5SVQ8 909 aa10.14□□□□□ -0.79
CDH13-204ENST00000539548 BBS12Q6ZW61 710 aa10.14□□□□□ -0.79
CDH13-204ENST00000539548 CHSY1Q86X52 802 aa10.14□□□□□ -0.79
CDH13-204ENST00000539548 RHPN2Q8IUC4 686 aa10.14□□□□□ -0.79
CDH13-204ENST00000539548 PALM2Q8IXS6 379 aa10.14□□□□□ -0.79
CDH13-204ENST00000539548 WDTC1Q8N5D0 677 aa10.14□□□□□ -0.79
CDH13-204ENST00000539548 FBXO36Q8NEA4 188 aa10.14□□□□□ -0.79
CDH13-204ENST00000539548 ACTL9Q8TC94 416 aa10.14□□□□□ -0.79
CDH13-204ENST00000539548 ACSF2Q96CM8 615 aaPredicted RBP10.14□□□□□ -0.79
CDH13-204ENST00000539548 JPH1Q9HDC5 661 aaPredicted RBP10.14□□□□□ -0.79
CDH13-204ENST00000539548 ARL8BQ9NVJ2 186 aa10.14□□□□□ -0.79
CDH13-204ENST00000539548 SLC17A7Q9P2U7 560 aa10.14□□□□□ -0.79
CDH13-204ENST00000539548 STOML1Q9UBI4 398 aa10.14□□□□□ -0.79
CDH13-204ENST00000539548 HEY2Q9UBP5 337 aa10.14□□□□□ -0.79
CDH13-204ENST00000539548 SLC9A2Q9UBY0 812 aa10.14□□□□□ -0.79
CDH13-204ENST00000539548 DCTN4Q9UJW0 460 aa10.14□□□□□ -0.79
CDH13-204ENST00000539548 PCDHGC3Q9UN70 934 aa10.14□□□□□ -0.79
CDH13-204ENST00000539548 MTO1Q9Y2Z2 717 aaKnown RBP10.14□□□□□ -0.79
CDH13-204ENST00000539548 TELO2Q9Y4R8 837 aa10.14□□□□□ -0.79
CDH13-204ENST00000539548 CLGNO14967 610 aa10.14□□□□□ -0.79
CDH13-204ENST00000539548 HAUS5O94927 633 aa10.14□□□□□ -0.79
CDH13-204ENST00000539548 EIF4BP23588 611 aaKnown RBP10.14□□□□□ -0.79
CDH13-204ENST00000539548 ARL2P36404 184 aa10.14□□□□□ -0.79
CDH13-204ENST00000539548 ARFIP2P53365 341 aa10.14□□□□□ -0.79
CDH13-204ENST00000539548 OVGP1Q12889 678 aa10.14□□□□□ -0.79
CDH13-204ENST00000539548 LBRQ14739 615 aaKnown RBP10.14□□□□□ -0.79
CDH13-204ENST00000539548 KRT72Q14CN4 511 aa10.14□□□□□ -0.79
CDH13-204ENST00000539548 R3HDM1Q15032 1099 aaKnown RBP10.14□□□□□ -0.79
CDH13-204ENST00000539548 KHDC1Q4VXA5 237 aaKnown RBP10.14□□□□□ -0.79
CDH13-204ENST00000539548 TRIM68Q6AZZ1 485 aa10.14□□□□□ -0.79
CDH13-204ENST00000539548 THNSL1Q8IYQ7 743 aa10.14□□□□□ -0.79
CDH13-204ENST00000539548 PDIK1LQ8N165 341 aa10.14□□□□□ -0.79
CDH13-204ENST00000539548 DEPTORQ8TB45 409 aa10.14□□□□□ -0.79
CDH13-204ENST00000539548 DNAJC9Q8WXX5 260 aa10.14□□□□□ -0.79
CDH13-204ENST00000539548 CDHR1Q96JP9 859 aa10.14□□□□□ -0.79
CDH13-204ENST00000539548 CYTH2Q99418 400 aa10.14□□□□□ -0.79
CDH13-204ENST00000539548 WDR83Q9BRX9 315 aaKnown RBP10.14□□□□□ -0.79
CDH13-204ENST00000539548 TARS2Q9BW92 718 aaKnown RBP10.14□□□□□ -0.79
CDH13-204ENST00000539548 TSSK1BQ9BXA7 367 aa10.14□□□□□ -0.79
CDH13-204ENST00000539548 IMPG2Q9BZV3 1241 aa10.14□□□□□ -0.79
CDH13-204ENST00000539548 PORCNQ9H237 461 aa10.14□□□□□ -0.79
CDH13-204ENST00000539548 KCNK13Q9HB14 408 aa10.14□□□□□ -0.79
CDH13-204ENST00000539548 SLC24A3Q9HC58 644 aa10.14□□□□□ -0.79
CDH13-204ENST00000539548 RNF146Q9NTX7 359 aa10.14□□□□□ -0.79
CDH13-204ENST00000539548 GINM1Q9NU53 330 aa10.14□□□□□ -0.79
CDH13-204ENST00000539548 PARP14Q460N5 1801 aa10.13□□□□□ -0.79
CDH13-204ENST00000539548 TNS1Q9HBL0 1735 aaKnown RBP10.13□□□□□ -0.79
CDH13-204ENST00000539548 H0Y3Z8 333 aa10.13□□□□□ -0.79
CDH13-204ENST00000539548 VWA5AO00534 786 aa10.13□□□□□ -0.79
CDH13-204ENST00000539548 KIF3CO14782 793 aa10.13□□□□□ -0.79
CDH13-204ENST00000539548 CST8O60676 142 aa10.13□□□□□ -0.79
CDH13-204ENST00000539548 CST3P01034 146 aaPredicted RBP10.13□□□□□ -0.79
CDH13-204ENST00000539548 MT-ND3P03897 115 aa10.13□□□□□ -0.79
CDH13-204ENST00000539548 KRT7P08729 469 aa10.13□□□□□ -0.79
CDH13-204ENST00000539548 ATP4AP20648 1035 aa10.13□□□□□ -0.79
CDH13-204ENST00000539548 KDELR1P24390 212 aa10.13□□□□□ -0.79
CDH13-204ENST00000539548 BRD2P25440 801 aaKnown RBP10.13□□□□□ -0.79
CDH13-204ENST00000539548 VHLP40337 213 aa10.13□□□□□ -0.79
CDH13-204ENST00000539548 NEK3P51956 506 aa10.13□□□□□ -0.79
CDH13-204ENST00000539548 GDF10P55107 478 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms