RNA–Protein interactions for RNA: ENST00000538862.6

CDCA3-207, Transcript of cell division cycle associated 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDCA3, Length 1,943 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-207ENST00000538862 MYCBPQ99417 103 aaPredicted RBP15.33■□□□□ 0.04
CDCA3-207ENST00000538862 TACO1Q9BSH4 297 aaKnown RBP15.33■□□□□ 0.04
CDCA3-207ENST00000538862 UBN1Q9NPG3 1134 aa15.33■□□□□ 0.04
CDCA3-207ENST00000538862 CEP290O15078 2479 aa15.32■□□□□ 0.04
CDCA3-207ENST00000538862 TCRBV5S1A1TA0A578 114 aa15.32■□□□□ 0.04
CDCA3-207ENST00000538862 GJC1P36383 396 aa15.32■□□□□ 0.04
CDCA3-207ENST00000538862 RPL7AP62424 266 aaKnown RBP15.32■□□□□ 0.04
CDCA3-207ENST00000538862 RIPK1Q13546 671 aa15.32■□□□□ 0.04
CDCA3-207ENST00000538862 PIGHQ14442 188 aaPredicted RBP15.32■□□□□ 0.04
CDCA3-207ENST00000538862 TARBP2Q15633 366 aaKnown RBP15.32■□□□□ 0.04
CDCA3-207ENST00000538862 MFSD14CQ5VZR4 134 aa15.32■□□□□ 0.04
CDCA3-207ENST00000538862 SPATA21Q7Z572 469 aa15.32■□□□□ 0.04
CDCA3-207ENST00000538862 ALLCQ8N6M5 410 aa15.32■□□□□ 0.04
CDCA3-207ENST00000538862 MAML3Q96JK9 1138 aa15.32■□□□□ 0.04
CDCA3-207ENST00000538862 C9orf72Q96LT7 481 aa15.32■□□□□ 0.04
CDCA3-207ENST00000538862 FAM118BQ9BPY3 351 aa15.32■□□□□ 0.04
CDCA3-207ENST00000538862 NRBP2Q9NSY0 501 aa15.32■□□□□ 0.04
CDCA3-207ENST00000538862 ABCF3Q9NUQ8 709 aa15.32■□□□□ 0.04
CDCA3-207ENST00000538862 DDX56Q9NY93 547 aaKnown RBP15.32■□□□□ 0.04
CDCA3-207ENST00000538862 PRKAG3Q9UGI9 489 aa15.32■□□□□ 0.04
CDCA3-207ENST00000538862 DNPEPQ9ULA0 475 aa15.32■□□□□ 0.04
CDCA3-207ENST00000538862 LCTP09848 1927 aa15.32■□□□□ 0.04
CDCA3-207ENST00000538862 KRT1P04264 644 aa15.31■□□□□ 0.04
CDCA3-207ENST00000538862 SLC8A1P32418 973 aa15.31■□□□□ 0.04
CDCA3-207ENST00000538862 SSTR3P32745 418 aaPredicted RBP15.31■□□□□ 0.04
CDCA3-207ENST00000538862 SLC18A1P54219 525 aa15.31■□□□□ 0.04
CDCA3-207ENST00000538862 MORF4L2Q15014 288 aa15.31■□□□□ 0.04
CDCA3-207ENST00000538862 CCDC142Q17RM4 750 aa15.31■□□□□ 0.04
CDCA3-207ENST00000538862 PREPLQ4J6C6 727 aaPredicted RBP15.31■□□□□ 0.04
CDCA3-207ENST00000538862 ATP13A4Q4VNC1 1196 aa15.31■□□□□ 0.04
CDCA3-207ENST00000538862 PRAMEF19Q5SWL8 479 aa15.31■□□□□ 0.04
CDCA3-207ENST00000538862 WLSQ5T9L3 541 aa15.31■□□□□ 0.04
CDCA3-207ENST00000538862 MFSD7Q6UXD7 560 aa15.31■□□□□ 0.04
CDCA3-207ENST00000538862 SPOCD1Q6ZMY3 1216 aa15.31■□□□□ 0.04
CDCA3-207ENST00000538862 RPAINQ86UA6 219 aa15.31■□□□□ 0.04
CDCA3-207ENST00000538862 FAM228AQ86W67 206 aa15.31■□□□□ 0.04
CDCA3-207ENST00000538862 EGFL6Q8IUX8 553 aa15.31■□□□□ 0.04
CDCA3-207ENST00000538862 NIPA2Q8N8Q9 360 aa15.31■□□□□ 0.04
CDCA3-207ENST00000538862 TMEM35BQ8NCS4 154 aa15.31■□□□□ 0.04
CDCA3-207ENST00000538862 TRPV1Q8NER1 839 aa15.31■□□□□ 0.04
CDCA3-207ENST00000538862 CHST13Q8NET6 341 aa15.31■□□□□ 0.04
CDCA3-207ENST00000538862 TGS1Q96RS0 853 aaKnown RBP15.31■□□□□ 0.04
CDCA3-207ENST00000538862 PPCSQ9HAB8 311 aa15.31■□□□□ 0.04
CDCA3-207ENST00000538862 TBK1Q9UHD2 729 aa15.31■□□□□ 0.04
CDCA3-207ENST00000538862 ZNF148Q9UQR1 794 aa15.31■□□□□ 0.04
CDCA3-207ENST00000538862 FRMPD3Q5JV73 1810 aa15.31■□□□□ 0.04
CDCA3-207ENST00000538862 UBOX5O94941 541 aa15.31■□□□□ 0.04
CDCA3-207ENST00000538862 EDN1P05305 212 aa15.31■□□□□ 0.04
CDCA3-207ENST00000538862 CDH5P33151 784 aaPredicted RBP15.31■□□□□ 0.04
CDCA3-207ENST00000538862 EFNA5P52803 228 aa15.31■□□□□ 0.04
CDCA3-207ENST00000538862 GSCP56915 257 aaPredicted RBP15.31■□□□□ 0.04
CDCA3-207ENST00000538862 IL9RQ01113 521 aa15.31■□□□□ 0.04
CDCA3-207ENST00000538862 BNIP1Q12981 228 aa15.31■□□□□ 0.04
CDCA3-207ENST00000538862 CAPSQ13938 189 aa15.31■□□□□ 0.04
CDCA3-207ENST00000538862 SURF1Q15526 300 aa15.31■□□□□ 0.04
CDCA3-207ENST00000538862 FAM133BQ5BKY9 247 aaKnown RBP15.31■□□□□ 0.04
CDCA3-207ENST00000538862 TFDP3Q5H9I0 405 aa15.31■□□□□ 0.04
CDCA3-207ENST00000538862 DNAJC24Q6P3W2 148 aa15.31■□□□□ 0.04
CDCA3-207ENST00000538862 SRRM1Q8IYB3 904 aaKnown RBP15.31■□□□□ 0.04
CDCA3-207ENST00000538862 PPME1Q9Y570 386 aa15.31■□□□□ 0.04
CDCA3-207ENST00000538862 FAM47DPA6NHR8 397 aa15.3■□□□□ 0.04
CDCA3-207ENST00000538862 RASA4BC9J798 803 aa15.3■□□□□ 0.04
CDCA3-207ENST00000538862 RASA4O43374 803 aa15.3■□□□□ 0.04
CDCA3-207ENST00000538862 CST3P01034 146 aaPredicted RBP15.3■□□□□ 0.04
CDCA3-207ENST00000538862 IGHA2P01877 340 aa15.3■□□□□ 0.04
CDCA3-207ENST00000538862 KRT10P13645 584 aa15.3■□□□□ 0.04
CDCA3-207ENST00000538862 ATF7P17544 494 aaPredicted RBP15.3■□□□□ 0.04
CDCA3-207ENST00000538862 EIF4BP23588 611 aaKnown RBP15.3■□□□□ 0.04
CDCA3-207ENST00000538862 ARSEP51690 589 aa15.3■□□□□ 0.04
CDCA3-207ENST00000538862 VCPP55072 806 aaKnown RBP15.3■□□□□ 0.04
CDCA3-207ENST00000538862 ZNF252P-AS1Q0IIN9 211 aa15.3■□□□□ 0.04
CDCA3-207ENST00000538862 SF3A3Q12874 501 aaKnown RBP eCLIP15.3■□□□□ 0.04
CDCA3-207ENST00000538862 RASA2Q15283 850 aa15.3■□□□□ 0.04
CDCA3-207ENST00000538862 SGSM1Q2NKQ1 1148 aa15.3■□□□□ 0.04
CDCA3-207ENST00000538862 ZNF792Q3KQV3 632 aa15.3■□□□□ 0.04
CDCA3-207ENST00000538862 PPP1R15BQ5SWA1 713 aa15.3■□□□□ 0.04
CDCA3-207ENST00000538862 TMEM63BQ5T3F8 832 aa15.3■□□□□ 0.04
CDCA3-207ENST00000538862 ZFYVE27Q5T4F4 411 aa15.3■□□□□ 0.04
CDCA3-207ENST00000538862 KAZNQ674X7 775 aa15.3■□□□□ 0.04
CDCA3-207ENST00000538862 OLFML2BQ68BL8 750 aa15.3■□□□□ 0.04
CDCA3-207ENST00000538862 RNF43Q68DV7 783 aa15.3■□□□□ 0.04
CDCA3-207ENST00000538862 DCUN1D2Q6PH85 259 aa15.3■□□□□ 0.04
CDCA3-207ENST00000538862 GDAP1Q8TB36 358 aa15.3■□□□□ 0.04
CDCA3-207ENST00000538862 DIS3LQ8TF46 1054 aaKnown RBP15.3■□□□□ 0.04
CDCA3-207ENST00000538862 NKD2Q969F2 451 aaPredicted RBP15.3■□□□□ 0.04
CDCA3-207ENST00000538862 SAYSD1Q9NPB0 183 aa15.3■□□□□ 0.04
CDCA3-207ENST00000538862 SLC5A4Q9NY91 659 aa15.3■□□□□ 0.04
CDCA3-207ENST00000538862 SENP1Q9P0U3 644 aa15.3■□□□□ 0.04
CDCA3-207ENST00000538862 PCDHGC3Q9UN70 934 aa15.3■□□□□ 0.04
CDCA3-207ENST00000538862 hCG_1818297A0A087WSY0 165 aa15.29■□□□□ 0.04
CDCA3-207ENST00000538862 EXOC1LA0A1B0GW35 172 aa15.29■□□□□ 0.04
CDCA3-207ENST00000538862 FOXO6A8MYZ6 492 aa15.29■□□□□ 0.04
CDCA3-207ENST00000538862 PI4K2BG5E9Z4 385 aa15.29■□□□□ 0.04
CDCA3-207ENST00000538862 ALOX15BO15296 676 aa15.29■□□□□ 0.04
CDCA3-207ENST00000538862 FAM189A1O60320 539 aa15.29■□□□□ 0.04
CDCA3-207ENST00000538862 MAFO75444 373 aaPredicted RBP15.29■□□□□ 0.04
CDCA3-207ENST00000538862 TOM1L1O75674 476 aa15.29■□□□□ 0.04
CDCA3-207ENST00000538862 ATP6V1G2O95670 118 aa15.29■□□□□ 0.04
CDCA3-207ENST00000538862 GH1P01241 217 aa15.29■□□□□ 0.04
CDCA3-207ENST00000538862 ITGAVP06756 1048 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms