RNA–Protein interactions for RNA: ENST00000538470.2

DDB1-212, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 858 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-212ENST00000538470 SIX4Q9UIU6 781 aa9.28□□□□□ -0.92
DDB1-212ENST00000538470 SNX9Q9Y5X1 595 aa9.28□□□□□ -0.92
DDB1-212ENST00000538470 EML5Q05BV3 1969 aa9.28□□□□□ -0.92
DDB1-212ENST00000538470 PRR5-ARHGAP8B1AHC4 643 aa9.27□□□□□ -0.93
DDB1-212ENST00000538470 K7ESF4 209 aa9.27□□□□□ -0.93
DDB1-212ENST00000538470 TADA3O75528 432 aa9.27□□□□□ -0.93
DDB1-212ENST00000538470 PFKLP17858 780 aa9.27□□□□□ -0.93
DDB1-212ENST00000538470 PDE6CP51160 858 aa9.27□□□□□ -0.93
DDB1-212ENST00000538470 ASIC1P78348 528 aa9.27□□□□□ -0.93
DDB1-212ENST00000538470 ARHGAP8P85298 464 aa9.27□□□□□ -0.93
DDB1-212ENST00000538470 SATB1Q01826 763 aa9.27□□□□□ -0.93
DDB1-212ENST00000538470 FAM160A1Q05DH4 1040 aa9.27□□□□□ -0.93
DDB1-212ENST00000538470 USP4Q13107 963 aa9.27□□□□□ -0.93
DDB1-212ENST00000538470 GAS6Q14393 721 aa9.27□□□□□ -0.93
DDB1-212ENST00000538470 PON2Q15165 354 aa9.27□□□□□ -0.93
DDB1-212ENST00000538470 PDGFRLQ15198 375 aa9.27□□□□□ -0.93
DDB1-212ENST00000538470 DUOXA2Q1HG44 320 aa9.27□□□□□ -0.93
DDB1-212ENST00000538470 FAM26FQ5R3K3 315 aa9.27□□□□□ -0.93
DDB1-212ENST00000538470 TXNDC11Q6PKC3 985 aa9.27□□□□□ -0.93
DDB1-212ENST00000538470 VSTM1Q6UX27 236 aa9.27□□□□□ -0.93
DDB1-212ENST00000538470 Q6ZS52 159 aa9.27□□□□□ -0.93
DDB1-212ENST00000538470 EPM2AIP1Q7L775 607 aaPredicted RBP9.27□□□□□ -0.93
DDB1-212ENST00000538470 MON1AQ86VX9 555 aa9.27□□□□□ -0.93
DDB1-212ENST00000538470 LONP2Q86WA8 852 aa9.27□□□□□ -0.93
DDB1-212ENST00000538470 SPATA2LQ8IUW3 424 aaPredicted RBP9.27□□□□□ -0.93
DDB1-212ENST00000538470 DCLK2Q8N568 766 aa9.27□□□□□ -0.93
DDB1-212ENST00000538470 FSIP1Q8NA03 581 aa9.27□□□□□ -0.93
DDB1-212ENST00000538470 IQUBQ8NA54 791 aa9.27□□□□□ -0.93
DDB1-212ENST00000538470 NOC3LQ8WTT2 800 aaKnown RBP9.27□□□□□ -0.93
DDB1-212ENST00000538470 USP13Q92995 863 aaPredicted RBP9.27□□□□□ -0.93
DDB1-212ENST00000538470 SNX21Q969T3 373 aa9.27□□□□□ -0.93
DDB1-212ENST00000538470 HPDLQ96IR7 371 aa9.27□□□□□ -0.93
DDB1-212ENST00000538470 FAM83CQ9BQN1 747 aa9.27□□□□□ -0.93
DDB1-212ENST00000538470 SYT15Q9BQS2 421 aa9.27□□□□□ -0.93
DDB1-212ENST00000538470 PI4K2AQ9BTU6 479 aa9.27□□□□□ -0.93
DDB1-212ENST00000538470 PCIF1Q9H4Z3 704 aa9.27□□□□□ -0.93
DDB1-212ENST00000538470 HSPBP1Q9NZL4 362 aa9.27□□□□□ -0.93
DDB1-212ENST00000538470 CGNQ9P2M7 1197 aaKnown RBP9.27□□□□□ -0.93
DDB1-212ENST00000538470 CDH9Q9ULB4 789 aa9.27□□□□□ -0.93
DDB1-212ENST00000538470 PTPRJQ12913 1337 aa9.27□□□□□ -0.93
DDB1-212ENST00000538470 SPTBN2O15020 2390 aa9.26□□□□□ -0.93
DDB1-212ENST00000538470 CCDC163A0A0D9SF12 145 aa9.26□□□□□ -0.93
DDB1-212ENST00000538470 TRDMT1O14717 391 aaKnown RBP9.26□□□□□ -0.93
DDB1-212ENST00000538470 FOXD2O60548 495 aaPredicted RBP9.26□□□□□ -0.93
DDB1-212ENST00000538470 STAU1O95793 577 aaKnown RBP9.26□□□□□ -0.93
DDB1-212ENST00000538470 RETP07949 1114 aa9.26□□□□□ -0.93
DDB1-212ENST00000538470 USP17L7P0C7H9 530 aa9.26□□□□□ -0.93
DDB1-212ENST00000538470 TCF3P15923 654 aa9.26□□□□□ -0.93
DDB1-212ENST00000538470 WARSP23381 471 aaKnown RBP9.26□□□□□ -0.93
DDB1-212ENST00000538470 ACAT1P24752 427 aaKnown RBP9.26□□□□□ -0.93
DDB1-212ENST00000538470 CYP2F1P24903 491 aa9.26□□□□□ -0.93
DDB1-212ENST00000538470 GPR15P49685 360 aa9.26□□□□□ -0.93
DDB1-212ENST00000538470 TNK2Q07912 1038 aa9.26□□□□□ -0.93
DDB1-212ENST00000538470 EHHADHQ08426 723 aa9.26□□□□□ -0.93
DDB1-212ENST00000538470 GRSF1Q12849 480 aaKnown RBP eCLIP9.26□□□□□ -0.93
DDB1-212ENST00000538470 RUNX3Q13761 415 aa9.26□□□□□ -0.93
DDB1-212ENST00000538470 MTF1Q14872 753 aa9.26□□□□□ -0.93
DDB1-212ENST00000538470 PSMD6Q15008 389 aa9.26□□□□□ -0.93
DDB1-212ENST00000538470 ZNF77Q15935 545 aa9.26□□□□□ -0.93
DDB1-212ENST00000538470 SNRNP35Q16560 246 aaKnown RBP9.26□□□□□ -0.93
DDB1-212ENST00000538470 DDR2Q16832 855 aa9.26□□□□□ -0.93
DDB1-212ENST00000538470 SOWAHAQ2M3V2 549 aa9.26□□□□□ -0.93
DDB1-212ENST00000538470 TMEM196Q5HYL7 178 aa9.26□□□□□ -0.93
DDB1-212ENST00000538470 WDR44Q5JSH3 913 aa9.26□□□□□ -0.93
DDB1-212ENST00000538470 ATL3Q6DD88 541 aa9.26□□□□□ -0.93
DDB1-212ENST00000538470 CC2D1AQ6P1N0 951 aaPredicted RBP9.26□□□□□ -0.93
DDB1-212ENST00000538470 FAM171BQ6P995 826 aa9.26□□□□□ -0.93
DDB1-212ENST00000538470 UNC13DQ70J99 1090 aa9.26□□□□□ -0.93
DDB1-212ENST00000538470 HS2ST1Q7LGA3 356 aa9.26□□□□□ -0.93
DDB1-212ENST00000538470 WDR5BQ86VZ2 330 aa9.26□□□□□ -0.93
DDB1-212ENST00000538470 OSTM1Q86WC4 334 aa9.26□□□□□ -0.93
DDB1-212ENST00000538470 CBWD2Q8IUF1 395 aa9.26□□□□□ -0.93
DDB1-212ENST00000538470 CPA6Q8N4T0 437 aa9.26□□□□□ -0.93
DDB1-212ENST00000538470 MAB21L3Q8N8X9 362 aa9.26□□□□□ -0.93
DDB1-212ENST00000538470 OR5B17Q8NGF7 314 aa9.26□□□□□ -0.93
DDB1-212ENST00000538470 ZNF507Q8TCN5 953 aa9.26□□□□□ -0.93
DDB1-212ENST00000538470 KBTBD7Q8WVZ9 684 aa9.26□□□□□ -0.93
DDB1-212ENST00000538470 DHX58Q96C10 678 aa9.26□□□□□ -0.93
DDB1-212ENST00000538470 SPATA17Q96L03 361 aa9.26□□□□□ -0.93
DDB1-212ENST00000538470 CGRRF1Q99675 332 aa9.26□□□□□ -0.93
DDB1-212ENST00000538470 C7orf25Q9BPX7 421 aa9.26□□□□□ -0.93
DDB1-212ENST00000538470 PANK2Q9BZ23 570 aa9.26□□□□□ -0.93
DDB1-212ENST00000538470 SMG9Q9H0W8 520 aaKnown RBP9.26□□□□□ -0.93
DDB1-212ENST00000538470 HPS4Q9NQG7 708 aa9.26□□□□□ -0.93
DDB1-212ENST00000538470 AGPAT3Q9NRZ7 376 aa9.26□□□□□ -0.93
DDB1-212ENST00000538470 RBM12Q9NTZ6 932 aaKnown RBP9.26□□□□□ -0.93
DDB1-212ENST00000538470 EHD2Q9NZN4 543 aa9.26□□□□□ -0.93
DDB1-212ENST00000538470 CDV3Q9UKY7 258 aaKnown RBP9.26□□□□□ -0.93
DDB1-212ENST00000538470 USP18Q9UMW8 372 aa9.26□□□□□ -0.93
DDB1-212ENST00000538470 MAGED2Q9UNF1 606 aaPredicted RBP9.26□□□□□ -0.93
DDB1-212ENST00000538470 CCL26Q9Y258 94 aa9.26□□□□□ -0.93
DDB1-212ENST00000538470 ATG2BQ96BY7 2078 aa9.26□□□□□ -0.93
DDB1-212ENST00000538470 MYH10P35580 1976 aa9.26□□□□□ -0.93
DDB1-212ENST00000538470 TRAV19A0A0A6YYK7 116 aa9.25□□□□□ -0.93
DDB1-212ENST00000538470 CHURC1-FNTBB4DL54 471 aa9.25□□□□□ -0.93
DDB1-212ENST00000538470 TRIM66O15016 1216 aa9.25□□□□□ -0.93
DDB1-212ENST00000538470 ATG13O75143 517 aa9.25□□□□□ -0.93
DDB1-212ENST00000538470 TACC1O75410 805 aa9.25□□□□□ -0.93
DDB1-212ENST00000538470 CKMP06732 381 aa9.25□□□□□ -0.93
DDB1-212ENST00000538470 FAM163BP0C2L3 166 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms