RNA–Protein interactions for RNA: ENST00000538129.1

DDB1-210, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 475 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-210ENST00000538129 RPN1P04843 607 aaKnown RBP6.46□□□□□ -1.38
DDB1-210ENST00000538129 ALDH2P05091 517 aa6.46□□□□□ -1.38
DDB1-210ENST00000538129 POU3F3P20264 500 aaPredicted RBP6.46□□□□□ -1.38
DDB1-210ENST00000538129 IBSPP21815 317 aaPredicted RBP6.46□□□□□ -1.38
DDB1-210ENST00000538129 AKAP5P24588 427 aa6.46□□□□□ -1.38
DDB1-210ENST00000538129 CASP1P29466 404 aa6.46□□□□□ -1.38
DDB1-210ENST00000538129 DNAJA1P31689 397 aaKnown RBP6.46□□□□□ -1.38
DDB1-210ENST00000538129 ALDH7A1P49419 539 aaKnown RBP6.46□□□□□ -1.38
DDB1-210ENST00000538129 LIG4P49917 911 aa6.46□□□□□ -1.38
DDB1-210ENST00000538129 GATMP50440 423 aa6.46□□□□□ -1.38
DDB1-210ENST00000538129 SNRPFP62306 86 aaKnown RBP6.46□□□□□ -1.38
DDB1-210ENST00000538129 POU5F1Q01860 360 aaKnown RBP6.46□□□□□ -1.38
DDB1-210ENST00000538129 ARID5AQ03989 594 aa6.46□□□□□ -1.38
DDB1-210ENST00000538129 MCL1Q07820 350 aa6.46□□□□□ -1.38
DDB1-210ENST00000538129 COASYQ13057 564 aa6.46□□□□□ -1.38
DDB1-210ENST00000538129 POSTNQ15063 836 aa6.46□□□□□ -1.38
DDB1-210ENST00000538129 ZNF568Q3ZCX4 644 aa6.46□□□□□ -1.38
DDB1-210ENST00000538129 EPC2Q52LR7 807 aa6.46□□□□□ -1.38
DDB1-210ENST00000538129 FAM26FQ5R3K3 315 aa6.46□□□□□ -1.38
DDB1-210ENST00000538129 L1TD1Q5T7N2 865 aaKnown RBP6.46□□□□□ -1.38
DDB1-210ENST00000538129 ALKAL1Q6UXT8 129 aa6.46□□□□□ -1.38
DDB1-210ENST00000538129 LRRC55Q6ZSA7 311 aa6.46□□□□□ -1.38
DDB1-210ENST00000538129 EPM2AIP1Q7L775 607 aaPredicted RBP6.46□□□□□ -1.38
DDB1-210ENST00000538129 HS2ST1Q7LGA3 356 aa6.46□□□□□ -1.38
DDB1-210ENST00000538129 NLRC5Q86WI3 1866 aa6.46□□□□□ -1.38
DDB1-210ENST00000538129 CDR2LQ86X02 465 aaPredicted RBP6.46□□□□□ -1.38
DDB1-210ENST00000538129 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.46□□□□□ -1.38
DDB1-210ENST00000538129 TMEM192Q8IY95 271 aa6.46□□□□□ -1.38
DDB1-210ENST00000538129 GRAMD1CQ8IYS0 662 aa6.46□□□□□ -1.38
DDB1-210ENST00000538129 SYCP3Q8IZU3 236 aa6.46□□□□□ -1.38
DDB1-210ENST00000538129 LRRC43Q8N309 656 aa6.46□□□□□ -1.38
DDB1-210ENST00000538129 SHKBP1Q8TBC3 707 aa6.46□□□□□ -1.38
DDB1-210ENST00000538129 URGCPQ8TCY9 931 aa6.46□□□□□ -1.38
DDB1-210ENST00000538129 ARNTL2Q8WYA1 636 aa6.46□□□□□ -1.38
DDB1-210ENST00000538129 LPPQ93052 612 aa6.46□□□□□ -1.38
DDB1-210ENST00000538129 P2RX5Q93086 422 aa6.46□□□□□ -1.38
DDB1-210ENST00000538129 BICD1Q96G01 975 aa6.46□□□□□ -1.38
DDB1-210ENST00000538129 ZBTB45Q96K62 511 aaPredicted RBP6.46□□□□□ -1.38
DDB1-210ENST00000538129 MFSD14AQ96MC6 490 aa6.46□□□□□ -1.38
DDB1-210ENST00000538129 ACAP3Q96P50 834 aa6.46□□□□□ -1.38
DDB1-210ENST00000538129 GBP4Q96PP9 640 aa6.46□□□□□ -1.38
DDB1-210ENST00000538129 TSPAN18Q96SJ8 248 aa6.46□□□□□ -1.38
DDB1-210ENST00000538129 GAD1Q99259 594 aa6.46□□□□□ -1.38
DDB1-210ENST00000538129 RSRP1Q9BUV0 290 aa6.46□□□□□ -1.38
DDB1-210ENST00000538129 CCDC94Q9BW85 323 aaPredicted RBP6.46□□□□□ -1.38
DDB1-210ENST00000538129 GTPBP4Q9BZE4 634 aaKnown RBP6.46□□□□□ -1.38
DDB1-210ENST00000538129 CDT1Q9H211 546 aa6.46□□□□□ -1.38
DDB1-210ENST00000538129 NXF3Q9H4D5 531 aaKnown RBP6.46□□□□□ -1.38
DDB1-210ENST00000538129 CWH43Q9H720 699 aa6.46□□□□□ -1.38
DDB1-210ENST00000538129 PLEKHA5Q9HAU0 1116 aa6.46□□□□□ -1.38
DDB1-210ENST00000538129 MTMR10Q9NXD2 777 aa6.46□□□□□ -1.38
DDB1-210ENST00000538129 CACNA2D2Q9NY47 1150 aa6.46□□□□□ -1.38
DDB1-210ENST00000538129 SNTG2Q9NY99 539 aa6.46□□□□□ -1.38
DDB1-210ENST00000538129 LMCD1Q9NZU5 365 aa6.46□□□□□ -1.38
DDB1-210ENST00000538129 HES2Q9Y543 173 aa6.46□□□□□ -1.38
DDB1-210ENST00000538129 PCDHB12Q9Y5F1 795 aa6.46□□□□□ -1.38
DDB1-210ENST00000538129 MRPL42Q9Y6G3 142 aaKnown RBP6.46□□□□□ -1.38
DDB1-210ENST00000538129 PRRC2BQ5JSZ5 2229 aaKnown RBP6.46□□□□□ -1.38
DDB1-210ENST00000538129 TDRD15B5MCY1 1934 aaKnown RBP6.46□□□□□ -1.38
DDB1-210ENST00000538129 RALGAPA2Q2PPJ7 1873 aa6.45□□□□□ -1.38
DDB1-210ENST00000538129 MEIS3P2A8K0S8 358 aa6.45□□□□□ -1.38
DDB1-210ENST00000538129 ANKRD63C9JTQ0 380 aa6.45□□□□□ -1.38
DDB1-210ENST00000538129 KIAA0391O15091 583 aaKnown RBP6.45□□□□□ -1.38
DDB1-210ENST00000538129 OGTO15294 1046 aa6.45□□□□□ -1.38
DDB1-210ENST00000538129 EIF3DO15371 548 aaKnown RBP eCLIP6.45□□□□□ -1.38
DDB1-210ENST00000538129 KINO60870 393 aaKnown RBP6.45□□□□□ -1.38
DDB1-210ENST00000538129 PRPF6O94906 941 aaKnown RBP6.45□□□□□ -1.38
DDB1-210ENST00000538129 RHOBTB3O94955 611 aa6.45□□□□□ -1.38
DDB1-210ENST00000538129 KIF20AO95235 890 aa6.45□□□□□ -1.38
DDB1-210ENST00000538129 SMC2O95347 1197 aa6.45□□□□□ -1.38
DDB1-210ENST00000538129 LDHAP00338 332 aaKnown RBP6.45□□□□□ -1.38
DDB1-210ENST00000538129 CLTAP09496 248 aa6.45□□□□□ -1.38
DDB1-210ENST00000538129 LINC00271P0C7V0 271 aa6.45□□□□□ -1.38
DDB1-210ENST00000538129 MYBP10242 640 aa6.45□□□□□ -1.38
DDB1-210ENST00000538129 LAG3P18627 525 aa6.45□□□□□ -1.38
DDB1-210ENST00000538129 GARTP22102 1010 aa6.45□□□□□ -1.38
DDB1-210ENST00000538129 GBP2P32456 591 aaPredicted RBP6.45□□□□□ -1.38
DDB1-210ENST00000538129 CASP5P51878 434 aa6.45□□□□□ -1.38
DDB1-210ENST00000538129 YARSP54577 528 aaKnown RBP6.45□□□□□ -1.38
DDB1-210ENST00000538129 RNASELQ05823 741 aaKnown RBP6.45□□□□□ -1.38
DDB1-210ENST00000538129 STK4Q13043 487 aa6.45□□□□□ -1.38
DDB1-210ENST00000538129 KCNB1Q14721 858 aa6.45□□□□□ -1.38
DDB1-210ENST00000538129 NOLC1Q14978 699 aaKnown RBP eCLIP6.45□□□□□ -1.38
DDB1-210ENST00000538129 BMT2Q1RMZ1 405 aa6.45□□□□□ -1.38
DDB1-210ENST00000538129 PAN2Q504Q3 1202 aaKnown RBP6.45□□□□□ -1.38
DDB1-210ENST00000538129 ZNF394Q53GI3 561 aa6.45□□□□□ -1.38
DDB1-210ENST00000538129 XKR4Q5GH76 650 aa6.45□□□□□ -1.38
DDB1-210ENST00000538129 SPOUT1Q5T280 376 aaKnown RBP6.45□□□□□ -1.38
DDB1-210ENST00000538129 KCNT2Q6UVM3 1135 aa6.45□□□□□ -1.38
DDB1-210ENST00000538129 ZAR1Q86SH2 424 aa6.45□□□□□ -1.38
DDB1-210ENST00000538129 THNSL1Q8IYQ7 743 aa6.45□□□□□ -1.38
DDB1-210ENST00000538129 GSTCDQ8NEC7 633 aa6.45□□□□□ -1.38
DDB1-210ENST00000538129 SPATA20Q8TB22 786 aa6.45□□□□□ -1.38
DDB1-210ENST00000538129 TMEM174Q8WUU8 243 aa6.45□□□□□ -1.38
DDB1-210ENST00000538129 SCFD1Q8WVM8 642 aa6.45□□□□□ -1.38
DDB1-210ENST00000538129 HPS3Q969F9 1004 aa6.45□□□□□ -1.38
DDB1-210ENST00000538129 FAM193BQ96PV7 902 aaPredicted RBP6.45□□□□□ -1.38
DDB1-210ENST00000538129 GSDMAQ96QA5 445 aa6.45□□□□□ -1.38
DDB1-210ENST00000538129 CDX2Q99626 313 aaPredicted RBP6.45□□□□□ -1.38
DDB1-210ENST00000538129 TMEM175Q9BSA9 504 aa6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms