RNA–Protein interactions for RNA: ENST00000537971.5

TSPAN9-206, Transcript of tetraspanin 9, humanhuman

APPRIS P1 TSL 3 BASIC

Gene TSPAN9, Length 4,284 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-206ENST00000537971 RNF139Q8WU17 664 aa12.9□□□□□ -0.34
TSPAN9-206ENST00000537971 ARHGEF2Q92974 986 aaKnown RBP12.9□□□□□ -0.34
TSPAN9-206ENST00000537971 FBXL18Q96ME1 805 aa12.9□□□□□ -0.34
TSPAN9-206ENST00000537971 UHRF1Q96T88 793 aaPredicted RBP12.9□□□□□ -0.34
TSPAN9-206ENST00000537971 IFT122Q9HBG6 1241 aa12.9□□□□□ -0.34
TSPAN9-206ENST00000537971 UXTQ9UBK9 157 aaPredicted RBP12.9□□□□□ -0.34
TSPAN9-206ENST00000537971 PACSIN2Q9UNF0 486 aaPredicted RBP12.9□□□□□ -0.34
TSPAN9-206ENST00000537971 HPSEQ9Y251 543 aa12.9□□□□□ -0.34
TSPAN9-206ENST00000537971 MCM3APO60318 1980 aa12.9□□□□□ -0.34
TSPAN9-206ENST00000537971 CCDC160A6NGH7 325 aa12.9□□□□□ -0.34
TSPAN9-206ENST00000537971 LRRC63Q05C16 580 aa12.9□□□□□ -0.34
TSPAN9-206ENST00000537971 GFPT1Q06210 699 aaPredicted RBP12.9□□□□□ -0.34
TSPAN9-206ENST00000537971 SMARCB1Q12824 385 aa12.9□□□□□ -0.34
TSPAN9-206ENST00000537971 CFAP157Q5JU67 520 aa12.9□□□□□ -0.34
TSPAN9-206ENST00000537971 GET4Q7L5D6 327 aaPredicted RBP12.9□□□□□ -0.34
TSPAN9-206ENST00000537971 HEXIM2Q96MH2 286 aaKnown RBP12.9□□□□□ -0.34
TSPAN9-206ENST00000537971 STIM2Q9P246 746 aa12.9□□□□□ -0.34
TSPAN9-206ENST00000537971 ARHGAP28Q9P2N2 729 aa12.9□□□□□ -0.34
TSPAN9-206ENST00000537971 MRPS17Q9Y2R5 130 aaKnown RBP12.9□□□□□ -0.34
TSPAN9-206ENST00000537971 CAPN9O14815 690 aa12.9□□□□□ -0.34
TSPAN9-206ENST00000537971 THAP12O43422 761 aa12.9□□□□□ -0.34
TSPAN9-206ENST00000537971 ADAM17P78536 824 aa12.9□□□□□ -0.34
TSPAN9-206ENST00000537971 DHX9Q08211 1270 aaKnown RBP12.9□□□□□ -0.34
TSPAN9-206ENST00000537971 IFT88Q13099 833 aa12.9□□□□□ -0.34
TSPAN9-206ENST00000537971 MBTPS1Q14703 1052 aa12.9□□□□□ -0.34
TSPAN9-206ENST00000537971 ZKSCAN8Q15776 578 aaPredicted RBP12.9□□□□□ -0.34
TSPAN9-206ENST00000537971 KCNK18Q7Z418 384 aa12.9□□□□□ -0.34
TSPAN9-206ENST00000537971 TMEM86AQ8N2M4 240 aa12.9□□□□□ -0.34
TSPAN9-206ENST00000537971 GUF1Q8N442 669 aaKnown RBP12.9□□□□□ -0.34
TSPAN9-206ENST00000537971 CORO1BQ9BR76 489 aa12.9□□□□□ -0.34
TSPAN9-206ENST00000537971 MINDY3Q9H8M7 445 aa12.9□□□□□ -0.34
TSPAN9-206ENST00000537971 FEZ2Q9UHY8 353 aaPredicted RBP12.9□□□□□ -0.34
TSPAN9-206ENST00000537971 DERAQ9Y315 318 aa12.9□□□□□ -0.34
TSPAN9-206ENST00000537971 DAAM1Q9Y4D1 1078 aa12.9□□□□□ -0.34
TSPAN9-206ENST00000537971 CDY1Q9Y6F8 540 aa12.9□□□□□ -0.34
TSPAN9-206ENST00000537971 VAMP7P51809 220 aa12.89□□□□□ -0.35
TSPAN9-206ENST00000537971 SGSM1Q2NKQ1 1148 aa12.89□□□□□ -0.35
TSPAN9-206ENST00000537971 SREK1Q8WXA9 508 aaKnown RBP12.89□□□□□ -0.35
TSPAN9-206ENST00000537971 MIS12Q9H081 205 aa12.89□□□□□ -0.35
TSPAN9-206ENST00000537971 ATXN3LQ9H3M9 355 aa12.89□□□□□ -0.35
TSPAN9-206ENST00000537971 ADAM21Q9UKJ8 722 aa12.89□□□□□ -0.35
TSPAN9-206ENST00000537971 C2CD2Q9Y426 696 aa12.89□□□□□ -0.35
TSPAN9-206ENST00000537971 LCHNA4D1U4 455 aa12.89□□□□□ -0.35
TSPAN9-206ENST00000537971 POC1B-GALNT4F8VUJ3 575 aa12.89□□□□□ -0.35
TSPAN9-206ENST00000537971 SPATA31D3P0C874 917 aa12.89□□□□□ -0.35
TSPAN9-206ENST00000537971 GNL1P36915 607 aaPredicted RBP12.89□□□□□ -0.35
TSPAN9-206ENST00000537971 PABPC1LQ4VXU2 614 aaKnown RBP12.89□□□□□ -0.35
TSPAN9-206ENST00000537971 SPATA31D4Q6ZUB0 917 aa12.89□□□□□ -0.35
TSPAN9-206ENST00000537971 C16orf59Q7L2K0 433 aa12.89□□□□□ -0.35
TSPAN9-206ENST00000537971 CACNA2D3Q8IZS8 1091 aa12.89□□□□□ -0.35
TSPAN9-206ENST00000537971 SLC39A11Q8N1S5 342 aa12.89□□□□□ -0.35
TSPAN9-206ENST00000537971 ATXN2LQ8WWM7 1075 aaKnown RBP12.89□□□□□ -0.35
TSPAN9-206ENST00000537971 ANKRD7Q92527 254 aa12.89□□□□□ -0.35
TSPAN9-206ENST00000537971 WRAP73Q9P2S5 460 aaPredicted RBP12.89□□□□□ -0.35
TSPAN9-206ENST00000537971 TIMM13Q9Y5L4 95 aaPredicted RBP12.89□□□□□ -0.35
TSPAN9-206ENST00000537971 PGRMC1O00264 195 aaKnown RBP12.89□□□□□ -0.35
TSPAN9-206ENST00000537971 ITGB1P05556 798 aa12.89□□□□□ -0.35
TSPAN9-206ENST00000537971 C8AP07357 584 aa12.89□□□□□ -0.35
TSPAN9-206ENST00000537971 CTSAP10619 480 aa12.89□□□□□ -0.35
TSPAN9-206ENST00000537971 GTF2BQ00403 316 aa12.89□□□□□ -0.35
TSPAN9-206ENST00000537971 PTK2Q05397 1052 aa12.89□□□□□ -0.35
TSPAN9-206ENST00000537971 BTBD8Q5XKL5 378 aa12.89□□□□□ -0.35
TSPAN9-206ENST00000537971 LMBRD2Q68DH5 695 aaPredicted RBP12.89□□□□□ -0.35
TSPAN9-206ENST00000537971 IFNLR1Q8IU57 520 aaPredicted RBP12.89□□□□□ -0.35
TSPAN9-206ENST00000537971 BRSK2Q8IWQ3 736 aa12.89□□□□□ -0.35
TSPAN9-206ENST00000537971 SIX6OS1Q8N1H7 587 aa12.89□□□□□ -0.35
TSPAN9-206ENST00000537971 C4orf32Q8N8J7 132 aa12.89□□□□□ -0.35
TSPAN9-206ENST00000537971 AUTS2Q8WXX7 1259 aa12.89□□□□□ -0.35
TSPAN9-206ENST00000537971 HSD3B7Q9H2F3 369 aa12.89□□□□□ -0.35
TSPAN9-206ENST00000537971 LSM7Q9UK45 103 aaKnown RBP12.89□□□□□ -0.35
TSPAN9-206ENST00000537971 STRIP2Q9ULQ0 834 aa12.89□□□□□ -0.35
TSPAN9-206ENST00000537971 GOLGA8SH3BPF8 625 aa12.88□□□□□ -0.35
TSPAN9-206ENST00000537971 CD58P19256 250 aa12.88□□□□□ -0.35
TSPAN9-206ENST00000537971 ARHGAP25P42331 645 aa12.88□□□□□ -0.35
TSPAN9-206ENST00000537971 NT5DC1Q5TFE4 455 aa12.88□□□□□ -0.35
TSPAN9-206ENST00000537971 NYAP1Q6ZVC0 841 aa12.88□□□□□ -0.35
TSPAN9-206ENST00000537971 BSNDQ8WZ55 320 aa12.88□□□□□ -0.35
TSPAN9-206ENST00000537971 PCDH10Q9P2E7 1040 aa12.88□□□□□ -0.35
TSPAN9-206ENST00000537971 ZNFX1Q9P2E3 1918 aaKnown RBP12.88□□□□□ -0.35
TSPAN9-206ENST00000537971 SYNJ2BP-COX16A0A087WUM0 186 aa12.88□□□□□ -0.35
TSPAN9-206ENST00000537971 CYP3A5P20815 502 aa12.88□□□□□ -0.35
TSPAN9-206ENST00000537971 BRCC3P46736 316 aa12.88□□□□□ -0.35
TSPAN9-206ENST00000537971 KPNA1P52294 538 aaPredicted RBP12.88□□□□□ -0.35
TSPAN9-206ENST00000537971 NCKAP1LP55160 1127 aa12.88□□□□□ -0.35
TSPAN9-206ENST00000537971 TERF2Q15554 542 aa12.88□□□□□ -0.35
TSPAN9-206ENST00000537971 TDRD10Q5VZ19 366 aaKnown RBP12.88□□□□□ -0.35
TSPAN9-206ENST00000537971 ADGRF2Q8IZF7 708 aa12.88□□□□□ -0.35
TSPAN9-206ENST00000537971 TRPM5Q9NZQ8 1165 aa12.88□□□□□ -0.35
TSPAN9-206ENST00000537971 COX16Q9P0S2 106 aa12.88□□□□□ -0.35
TSPAN9-206ENST00000537971 TBK1Q9UHD2 729 aa12.88□□□□□ -0.35
TSPAN9-206ENST00000537971 BZW2Q9Y6E2 419 aaKnown RBP12.88□□□□□ -0.35
TSPAN9-206ENST00000537971 A6NNZ2 444 aa12.88□□□□□ -0.35
TSPAN9-206ENST00000537971 IGHA2P01877 340 aa12.88□□□□□ -0.35
TSPAN9-206ENST00000537971 PTPN2P17706 415 aa12.88□□□□□ -0.35
TSPAN9-206ENST00000537971 NCOA4Q13772 614 aa12.88□□□□□ -0.35
TSPAN9-206ENST00000537971 TUBB8Q3ZCM7 444 aa12.88□□□□□ -0.35
TSPAN9-206ENST00000537971 JADE1Q6IE81 842 aa12.88□□□□□ -0.35
TSPAN9-206ENST00000537971 MRPL10Q7Z7H8 261 aaKnown RBP12.88□□□□□ -0.35
TSPAN9-206ENST00000537971 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.88□□□□□ -0.35
TSPAN9-206ENST00000537971 SPPL3Q8TCT6 385 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms