RNA–Protein interactions for RNA: ENST00000536871.6

SMG6-203, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 2 BASIC

Gene SMG6, Length 1,865 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-203ENST00000536871 VSIG1Q86XK7 387 aa14.29□□□□□ -0.12
SMG6-203ENST00000536871 SH2D3CQ8N5H7 860 aa14.29□□□□□ -0.12
SMG6-203ENST00000536871 USP6NLQ92738 828 aa14.29□□□□□ -0.12
SMG6-203ENST00000536871 RNF25Q96BH1 459 aaPredicted RBP14.29□□□□□ -0.12
SMG6-203ENST00000536871 HEMGNQ9BXL5 484 aa14.29□□□□□ -0.12
SMG6-203ENST00000536871 CYLDQ9NQC7 956 aa14.29□□□□□ -0.12
SMG6-203ENST00000536871 ANK1P16157 1881 aa14.29□□□□□ -0.12
SMG6-203ENST00000536871 LRRD1A4D1F6 860 aa14.29□□□□□ -0.12
SMG6-203ENST00000536871 RGS16O15492 202 aaPredicted RBP14.29□□□□□ -0.12
SMG6-203ENST00000536871 ECM2O94769 699 aaPredicted RBP14.29□□□□□ -0.12
SMG6-203ENST00000536871 CYP3A5P20815 502 aa14.29□□□□□ -0.12
SMG6-203ENST00000536871 RFC1P35251 1148 aaPredicted RBP14.29□□□□□ -0.12
SMG6-203ENST00000536871 SCNN1AP37088 669 aa14.29□□□□□ -0.12
SMG6-203ENST00000536871 CDKN2BP42772 138 aa14.29□□□□□ -0.12
SMG6-203ENST00000536871 HUNKP57058 714 aa14.29□□□□□ -0.12
SMG6-203ENST00000536871 ADAM17P78536 824 aa14.29□□□□□ -0.12
SMG6-203ENST00000536871 SLC29A2Q14542 456 aa14.29□□□□□ -0.12
SMG6-203ENST00000536871 TAF1CQ15572 869 aaPredicted RBP14.29□□□□□ -0.12
SMG6-203ENST00000536871 TAZQ16635 292 aa14.29□□□□□ -0.12
SMG6-203ENST00000536871 CYP4A22Q5TCH4 519 aa14.29□□□□□ -0.12
SMG6-203ENST00000536871 SCARA3Q6AZY7 606 aa14.29□□□□□ -0.12
SMG6-203ENST00000536871 TAF2Q6P1X5 1199 aa14.29□□□□□ -0.12
SMG6-203ENST00000536871 MFSD7Q6UXD7 560 aa14.29□□□□□ -0.12
SMG6-203ENST00000536871 SRLQ86TD4 932 aa14.29□□□□□ -0.12
SMG6-203ENST00000536871 CENPTQ96BT3 561 aa14.29□□□□□ -0.12
SMG6-203ENST00000536871 CPXM1Q96SM3 734 aa14.29□□□□□ -0.12
SMG6-203ENST00000536871 PPP1R16BQ96T49 567 aa14.29□□□□□ -0.12
SMG6-203ENST00000536871 APBA2Q99767 749 aa14.29□□□□□ -0.12
SMG6-203ENST00000536871 CCDC77Q9BR77 488 aa14.29□□□□□ -0.12
SMG6-203ENST00000536871 EPN3Q9H201 632 aa14.29□□□□□ -0.12
SMG6-203ENST00000536871 EPB41L4BQ9H329 900 aa14.29□□□□□ -0.12
SMG6-203ENST00000536871 PPCSQ9HAB8 311 aa14.29□□□□□ -0.12
SMG6-203ENST00000536871 HESX1Q9UBX0 185 aa14.29□□□□□ -0.12
SMG6-203ENST00000536871 GRIN2DO15399 1336 aa14.28□□□□□ -0.12
SMG6-203ENST00000536871 GOLGA8SH3BPF8 625 aa14.28□□□□□ -0.12
SMG6-203ENST00000536871 CSDE1O75534 798 aaKnown RBP14.28□□□□□ -0.12
SMG6-203ENST00000536871 TCEA3O75764 348 aa14.28□□□□□ -0.12
SMG6-203ENST00000536871 KLRC2P26717 231 aa14.28□□□□□ -0.12
SMG6-203ENST00000536871 GJC1P36383 396 aa14.28□□□□□ -0.12
SMG6-203ENST00000536871 ZNF143P52747 638 aaPredicted RBP14.28□□□□□ -0.12
SMG6-203ENST00000536871 CRYBB1P53674 252 aaPredicted RBP14.28□□□□□ -0.12
SMG6-203ENST00000536871 VCPP55072 806 aaKnown RBP14.28□□□□□ -0.12
SMG6-203ENST00000536871 OGDHQ02218 1023 aa14.28□□□□□ -0.12
SMG6-203ENST00000536871 SLC25A11Q02978 314 aaKnown RBP14.28□□□□□ -0.12
SMG6-203ENST00000536871 BBS12Q6ZW61 710 aa14.28□□□□□ -0.12
SMG6-203ENST00000536871 B4GALNT4Q76KP1 1039 aa14.28□□□□□ -0.12
SMG6-203ENST00000536871 OR2W6PQ8NHA6 318 aa14.28□□□□□ -0.12
SMG6-203ENST00000536871 BCAS4Q8TDM0 211 aa14.28□□□□□ -0.12
SMG6-203ENST00000536871 ATG4AQ8WYN0 398 aa14.28□□□□□ -0.12
SMG6-203ENST00000536871 KAT2BQ92831 832 aa14.28□□□□□ -0.12
SMG6-203ENST00000536871 ZBTB9Q96C00 473 aa14.28□□□□□ -0.12
SMG6-203ENST00000536871 TTC25Q96NG3 672 aa14.28□□□□□ -0.12
SMG6-203ENST00000536871 SERPINB12Q96P63 405 aa14.28□□□□□ -0.12
SMG6-203ENST00000536871 CNPY3Q9BT09 278 aa14.28□□□□□ -0.12
SMG6-203ENST00000536871 FAM49AQ9H0Q0 323 aaPredicted RBP14.28□□□□□ -0.12
SMG6-203ENST00000536871 SEMA4AQ9H3S1 761 aa14.28□□□□□ -0.12
SMG6-203ENST00000536871 RSAD1Q9HA92 442 aa14.28□□□□□ -0.12
SMG6-203ENST00000536871 BCCIPQ9P287 314 aaKnown RBP eCLIP14.28□□□□□ -0.12
SMG6-203ENST00000536871 CPA4Q9UI42 421 aa14.28□□□□□ -0.12
SMG6-203ENST00000536871 NOVA2Q9UNW9 492 aaKnown RBP14.28□□□□□ -0.12
SMG6-203ENST00000536871 ZNF148Q9UQR1 794 aa14.28□□□□□ -0.12
SMG6-203ENST00000536871 RASGRF2O14827 1237 aa14.27□□□□□ -0.12
SMG6-203ENST00000536871 CLGNO14967 610 aa14.27□□□□□ -0.12
SMG6-203ENST00000536871 LRCH4O75427 683 aa14.27□□□□□ -0.12
SMG6-203ENST00000536871 ERBB2P04626 1255 aa14.27□□□□□ -0.12
SMG6-203ENST00000536871 KCNE1P15382 129 aa14.27□□□□□ -0.12
SMG6-203ENST00000536871 LSP1P33241 339 aa14.27□□□□□ -0.12
SMG6-203ENST00000536871 GTF2A1P52655 376 aaPredicted RBP14.27□□□□□ -0.12
SMG6-203ENST00000536871 ITGA8P53708 1063 aa14.27□□□□□ -0.12
SMG6-203ENST00000536871 MORF4L2Q15014 288 aa14.27□□□□□ -0.12
SMG6-203ENST00000536871 DNAJC21Q5F1R6 531 aaKnown RBP14.27□□□□□ -0.12
SMG6-203ENST00000536871 XKR4Q5GH76 650 aa14.27□□□□□ -0.12
SMG6-203ENST00000536871 ARHGAP17Q68EM7 881 aa14.27□□□□□ -0.12
SMG6-203ENST00000536871 ALKAL1Q6UXT8 129 aa14.27□□□□□ -0.12
SMG6-203ENST00000536871 PAXIP1Q6ZW49 1069 aaPredicted RBP14.27□□□□□ -0.12
SMG6-203ENST00000536871 ARCQ7LC44 396 aa14.27□□□□□ -0.12
SMG6-203ENST00000536871 MAP7D3Q8IWC1 876 aa14.27□□□□□ -0.12
SMG6-203ENST00000536871 ALLCQ8N6M5 410 aa14.27□□□□□ -0.12
SMG6-203ENST00000536871 CMASQ8NFW8 434 aaPredicted RBP14.27□□□□□ -0.12
SMG6-203ENST00000536871 TWNKQ96RR1 684 aa14.27□□□□□ -0.12
SMG6-203ENST00000536871 MYCBPQ99417 103 aaPredicted RBP14.27□□□□□ -0.12
SMG6-203ENST00000536871 RRAGCQ9HB90 399 aa14.27□□□□□ -0.12
SMG6-203ENST00000536871 PCDH9Q9HC56 1237 aa14.27□□□□□ -0.12
SMG6-203ENST00000536871 ZFYVE28Q9HCC9 887 aa14.27□□□□□ -0.12
SMG6-203ENST00000536871 METTL5Q9NRN9 209 aaKnown RBP14.27□□□□□ -0.12
SMG6-203ENST00000536871 SNTG2Q9NY99 539 aa14.27□□□□□ -0.12
SMG6-203ENST00000536871 TSPAN16Q9UKR8 245 aa14.27□□□□□ -0.12
SMG6-203ENST00000536871 R3HDM2Q9Y2K5 976 aaKnown RBP14.27□□□□□ -0.12
SMG6-203ENST00000536871 C17orf102A2RUQ5 167 aa14.27□□□□□ -0.13
SMG6-203ENST00000536871 EBAG9O00559 213 aa14.27□□□□□ -0.13
SMG6-203ENST00000536871 DPYSL4O14531 572 aa14.27□□□□□ -0.13
SMG6-203ENST00000536871 TTC4O95801 387 aa14.27□□□□□ -0.13
SMG6-203ENST00000536871 ABHD2P08910 425 aa14.27□□□□□ -0.13
SMG6-203ENST00000536871 GPD1P21695 349 aa14.27□□□□□ -0.13
SMG6-203ENST00000536871 ATP1A2P50993 1020 aa14.27□□□□□ -0.13
SMG6-203ENST00000536871 TFDP2Q14188 446 aa14.27□□□□□ -0.13
SMG6-203ENST00000536871 FAM102AQ5T9C2 384 aaPredicted RBP14.27□□□□□ -0.13
SMG6-203ENST00000536871 C17orf99Q6UX52 265 aa14.27□□□□□ -0.13
SMG6-203ENST00000536871 SESTD1Q86VW0 696 aa14.27□□□□□ -0.13
SMG6-203ENST00000536871 RASAL3Q86YV0 1011 aa14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms