RNA–Protein interactions for RNA: ENST00000536823.5

YBX3-206, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 840 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-206ENST00000536823 GLUD2P49448 558 aa7.69□□□□□ -1.18
YBX3-206ENST00000536823 ZNF131P52739 623 aa7.69□□□□□ -1.18
YBX3-206ENST00000536823 DSG1Q02413 1049 aa7.69□□□□□ -1.18
YBX3-206ENST00000536823 ITIH3Q06033 890 aa7.69□□□□□ -1.18
YBX3-206ENST00000536823 HSP90AA2PQ14568 343 aaPredicted RBP7.69□□□□□ -1.18
YBX3-206ENST00000536823 CBX2Q14781 532 aaPredicted RBP7.69□□□□□ -1.18
YBX3-206ENST00000536823 NOLC1Q14978 699 aaKnown RBP eCLIP7.69□□□□□ -1.18
YBX3-206ENST00000536823 NAB2Q15742 525 aa7.69□□□□□ -1.18
YBX3-206ENST00000536823 ARSHQ5FYA8 562 aa7.69□□□□□ -1.18
YBX3-206ENST00000536823 KRTAP5-3Q6L8H2 238 aa7.69□□□□□ -1.18
YBX3-206ENST00000536823 FUT10Q6P4F1 479 aa7.69□□□□□ -1.18
YBX3-206ENST00000536823 FAM173BQ6P4H8 233 aa7.69□□□□□ -1.18
YBX3-206ENST00000536823 MPZL3Q6UWV2 235 aa7.69□□□□□ -1.18
YBX3-206ENST00000536823 TAS1R1Q7RTX1 841 aa7.69□□□□□ -1.18
YBX3-206ENST00000536823 ZNF438Q7Z4V0 828 aa7.69□□□□□ -1.18
YBX3-206ENST00000536823 PPFIBP1Q86W92 1011 aa7.69□□□□□ -1.18
YBX3-206ENST00000536823 HSCBQ8IWL3 235 aa7.69□□□□□ -1.18
YBX3-206ENST00000536823 GPR65Q8IYL9 337 aa7.69□□□□□ -1.18
YBX3-206ENST00000536823 BHLHE22Q8NFJ8 381 aaPredicted RBP7.69□□□□□ -1.18
YBX3-206ENST00000536823 RASSF8Q8NHQ8 419 aa7.69□□□□□ -1.18
YBX3-206ENST00000536823 RAD54LQ92698 747 aa7.69□□□□□ -1.18
YBX3-206ENST00000536823 KCNN1Q92952 543 aa7.69□□□□□ -1.18
YBX3-206ENST00000536823 FAM84AQ96KN4 292 aa7.69□□□□□ -1.18
YBX3-206ENST00000536823 REEP2Q9BRK0 252 aa7.69□□□□□ -1.18
YBX3-206ENST00000536823 NTPCRQ9BSD7 190 aaKnown RBP7.69□□□□□ -1.18
YBX3-206ENST00000536823 CCDC94Q9BW85 323 aaPredicted RBP7.69□□□□□ -1.18
YBX3-206ENST00000536823 TARS2Q9BW92 718 aaKnown RBP7.69□□□□□ -1.18
YBX3-206ENST00000536823 COLEC11Q9BWP8 271 aa7.69□□□□□ -1.18
YBX3-206ENST00000536823 APOL5Q9BWW9 433 aa7.69□□□□□ -1.18
YBX3-206ENST00000536823 EMILIN2Q9BXX0 1053 aa7.69□□□□□ -1.18
YBX3-206ENST00000536823 KRTAP9-3Q9BYQ3 159 aa7.69□□□□□ -1.18
YBX3-206ENST00000536823 GPR62Q9BZJ7 368 aa7.69□□□□□ -1.18
YBX3-206ENST00000536823 ZSCAN16Q9H4T2 348 aaPredicted RBP7.69□□□□□ -1.18
YBX3-206ENST00000536823 EPHX3Q9H6B9 360 aa7.69□□□□□ -1.18
YBX3-206ENST00000536823 PTPRHQ9HD43 1115 aa7.69□□□□□ -1.18
YBX3-206ENST00000536823 MRPL17Q9NRX2 175 aaKnown RBP7.69□□□□□ -1.18
YBX3-206ENST00000536823 TOPORSQ9NS56 1045 aaPredicted RBP7.69□□□□□ -1.18
YBX3-206ENST00000536823 LARSQ9P2J5 1176 aaKnown RBP7.69□□□□□ -1.18
YBX3-206ENST00000536823 CACNG4Q9UBN1 327 aa7.69□□□□□ -1.18
YBX3-206ENST00000536823 KCNG1Q9UIX4 513 aa7.69□□□□□ -1.18
YBX3-206ENST00000536823 FBXO2Q9UK22 296 aaPredicted RBP7.69□□□□□ -1.18
YBX3-206ENST00000536823 ADAM28Q9UKQ2 775 aa7.69□□□□□ -1.18
YBX3-206ENST00000536823 SSX2IPQ9Y2D8 614 aa7.69□□□□□ -1.18
YBX3-206ENST00000536823 GDAQ9Y2T3 454 aa7.69□□□□□ -1.18
YBX3-206ENST00000536823 MYH15Q9Y2K3 1946 aa7.69□□□□□ -1.18
YBX3-206ENST00000536823 SF3B1O75533 1304 aaKnown RBP eCLIP7.69□□□□□ -1.18
YBX3-206ENST00000536823 VWA8A3KMH1 1905 aa7.68□□□□□ -1.18
YBX3-206ENST00000536823 MYO10Q9HD67 2058 aa7.68□□□□□ -1.18
YBX3-206ENST00000536823 H0YCG3 227 aa7.68□□□□□ -1.18
YBX3-206ENST00000536823 TMEM189-UBE2V1I3L0A0 370 aa7.68□□□□□ -1.18
YBX3-206ENST00000536823 TEX28O15482 410 aa7.68□□□□□ -1.18
YBX3-206ENST00000536823 TBCAO75347 108 aaKnown RBP7.68□□□□□ -1.18
YBX3-206ENST00000536823 PRPF40AO75400 957 aaKnown RBP7.68□□□□□ -1.18
YBX3-206ENST00000536823 TOM1L1O75674 476 aa7.68□□□□□ -1.18
YBX3-206ENST00000536823 ALADP13716 330 aa7.68□□□□□ -1.18
YBX3-206ENST00000536823 SCP2P22307 547 aa7.68□□□□□ -1.18
YBX3-206ENST00000536823 KLRC2P26717 231 aa7.68□□□□□ -1.18
YBX3-206ENST00000536823 MTHFRP42898 656 aa7.68□□□□□ -1.18
YBX3-206ENST00000536823 NASPP49321 788 aaPredicted RBP7.68□□□□□ -1.18
YBX3-206ENST00000536823 CLCN4P51793 760 aa7.68□□□□□ -1.18
YBX3-206ENST00000536823 YARSP54577 528 aaKnown RBP7.68□□□□□ -1.18
YBX3-206ENST00000536823 NCKAP1LP55160 1127 aa7.68□□□□□ -1.18
YBX3-206ENST00000536823 STRN3Q13033 797 aa7.68□□□□□ -1.18
YBX3-206ENST00000536823 ORC1Q13415 861 aa7.68□□□□□ -1.18
YBX3-206ENST00000536823 USP41Q3LFD5 358 aa7.68□□□□□ -1.18
YBX3-206ENST00000536823 HERC4Q5GLZ8 1057 aaPredicted RBP7.68□□□□□ -1.18
YBX3-206ENST00000536823 RARS2Q5T160 578 aaKnown RBP7.68□□□□□ -1.18
YBX3-206ENST00000536823 KIAA0319Q5VV43 1072 aa7.68□□□□□ -1.18
YBX3-206ENST00000536823 KIAA1841Q6NSI8 718 aa7.68□□□□□ -1.18
YBX3-206ENST00000536823 CES5AQ6NT32 575 aa7.68□□□□□ -1.18
YBX3-206ENST00000536823 ZPBP2Q6X784 338 aa7.68□□□□□ -1.18
YBX3-206ENST00000536823 USP49Q70CQ1 688 aa7.68□□□□□ -1.18
YBX3-206ENST00000536823 ZNF765Q7L2R6 523 aa7.68□□□□□ -1.18
YBX3-206ENST00000536823 C2CD4AQ8NCU7 369 aaPredicted RBP7.68□□□□□ -1.18
YBX3-206ENST00000536823 FBF1Q8TES7 1133 aa7.68□□□□□ -1.18
YBX3-206ENST00000536823 LARP4BQ92615 738 aaKnown RBP7.68□□□□□ -1.18
YBX3-206ENST00000536823 RABGGTAQ92696 567 aa7.68□□□□□ -1.18
YBX3-206ENST00000536823 EPSTI1Q96J88 318 aa7.68□□□□□ -1.18
YBX3-206ENST00000536823 SNX27Q96L92 541 aa7.68□□□□□ -1.18
YBX3-206ENST00000536823 NECTIN4Q96NY8 510 aa7.68□□□□□ -1.18
YBX3-206ENST00000536823 KLHL5Q96PQ7 755 aa7.68□□□□□ -1.18
YBX3-206ENST00000536823 PPP1R10Q96QC0 940 aaKnown RBP7.68□□□□□ -1.18
YBX3-206ENST00000536823 USP28Q96RU2 1077 aa7.68□□□□□ -1.18
YBX3-206ENST00000536823 PAAF1Q9BRP4 392 aa7.68□□□□□ -1.18
YBX3-206ENST00000536823 CXCL16Q9H2A7 254 aa7.68□□□□□ -1.18
YBX3-206ENST00000536823 ADAM7Q9H2U9 754 aa7.68□□□□□ -1.18
YBX3-206ENST00000536823 SFXN1Q9H9B4 322 aa7.68□□□□□ -1.18
YBX3-206ENST00000536823 PARVGQ9HBI0 331 aa7.68□□□□□ -1.18
YBX3-206ENST00000536823 RXFP1Q9HBX9 757 aa7.68□□□□□ -1.18
YBX3-206ENST00000536823 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP7.68□□□□□ -1.18
YBX3-206ENST00000536823 CHST7Q9NS84 486 aa7.68□□□□□ -1.18
YBX3-206ENST00000536823 TMEM63CQ9P1W3 806 aa7.68□□□□□ -1.18
YBX3-206ENST00000536823 CDH22Q9UJ99 828 aa7.68□□□□□ -1.18
YBX3-206ENST00000536823 SRPRBQ9Y5M8 271 aaKnown RBP7.68□□□□□ -1.18
YBX3-206ENST00000536823 PLXNA3P51805 1871 aa7.68□□□□□ -1.18
YBX3-206ENST00000536823 PDCD11Q14690 1871 aaKnown RBP7.68□□□□□ -1.18
YBX3-206ENST00000536823 DENND4AQ7Z401 1863 aa7.68□□□□□ -1.18
YBX3-206ENST00000536823 DOCK8Q8NF50 2099 aa7.67□□□□□ -1.18
YBX3-206ENST00000536823 WDFY4Q6ZS81 3184 aa7.67□□□□□ -1.18
YBX3-206ENST00000536823 LOC100289279A0A1B0GTE1 492 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms