RNA–Protein interactions for RNA: ENST00000536708.6

CDK5RAP3-202, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2 BASIC

Gene CDK5RAP3, Length 1,975 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-202ENST00000536708 UTP11Q9Y3A2 253 aaKnown RBP13.72□□□□□ -0.21
CDK5RAP3-202ENST00000536708 ALG6Q9Y672 507 aa13.72□□□□□ -0.21
CDK5RAP3-202ENST00000536708 COL4A6Q14031 1691 aa13.72□□□□□ -0.21
CDK5RAP3-202ENST00000536708 TTI1O43156 1089 aa13.71□□□□□ -0.21
CDK5RAP3-202ENST00000536708 CYP26A1O43174 497 aa13.71□□□□□ -0.21
CDK5RAP3-202ENST00000536708 B4GALT3O60512 393 aa13.71□□□□□ -0.21
CDK5RAP3-202ENST00000536708 ZNF623O75123 536 aa13.71□□□□□ -0.21
CDK5RAP3-202ENST00000536708 FTLP02792 175 aaPredicted RBP13.71□□□□□ -0.21
CDK5RAP3-202ENST00000536708 WEE2P0C1S8 567 aa13.71□□□□□ -0.21
CDK5RAP3-202ENST00000536708 NR1D1P20393 614 aa13.71□□□□□ -0.21
CDK5RAP3-202ENST00000536708 ACO1P21399 889 aaKnown RBP13.71□□□□□ -0.21
CDK5RAP3-202ENST00000536708 MFAP3P55082 362 aa13.71□□□□□ -0.21
CDK5RAP3-202ENST00000536708 DHX34Q14147 1143 aaKnown RBP13.71□□□□□ -0.21
CDK5RAP3-202ENST00000536708 PTPROQ16827 1216 aa13.71□□□□□ -0.21
CDK5RAP3-202ENST00000536708 CLLU1OSQ5K130 101 aa13.71□□□□□ -0.21
CDK5RAP3-202ENST00000536708 DDX42Q86XP3 938 aaKnown RBP eCLIP13.71□□□□□ -0.216e-10■□□□□ 8.4
CDK5RAP3-202ENST00000536708 PAAF1Q9BRP4 392 aa13.71□□□□□ -0.21
CDK5RAP3-202ENST00000536708 TXLNGYQ9BZA5 131 aa13.71□□□□□ -0.21
CDK5RAP3-202ENST00000536708 SDCBP2Q9H190 292 aa13.71□□□□□ -0.21
CDK5RAP3-202ENST00000536708 UBQLN1Q9UMX0 589 aaKnown RBP13.71□□□□□ -0.21
CDK5RAP3-202ENST00000536708 DERAQ9Y315 318 aa13.71□□□□□ -0.21
CDK5RAP3-202ENST00000536708 GOLGA6L10A0A0M3HER8 536 aa13.71□□□□□ -0.22
CDK5RAP3-202ENST00000536708 DAPK3O43293 454 aa13.71□□□□□ -0.22
CDK5RAP3-202ENST00000536708 KRT5P13647 590 aa13.71□□□□□ -0.22
CDK5RAP3-202ENST00000536708 GATMP50440 423 aa13.71□□□□□ -0.22
CDK5RAP3-202ENST00000536708 ORC1Q13415 861 aa13.71□□□□□ -0.22
CDK5RAP3-202ENST00000536708 SGSM1Q2NKQ1 1148 aa13.71□□□□□ -0.22
CDK5RAP3-202ENST00000536708 CEP85LQ5SZL2 805 aa13.71□□□□□ -0.22
CDK5RAP3-202ENST00000536708 AGBL2Q5U5Z8 902 aa13.71□□□□□ -0.22
CDK5RAP3-202ENST00000536708 C9orf57Q5W0N0 161 aa13.71□□□□□ -0.22
CDK5RAP3-202ENST00000536708 KCTD16Q68DU8 428 aa13.71□□□□□ -0.22
CDK5RAP3-202ENST00000536708 DUPD1Q68J44 220 aa13.71□□□□□ -0.22
CDK5RAP3-202ENST00000536708 MMS22LQ6ZRQ5 1243 aa13.71□□□□□ -0.22
CDK5RAP3-202ENST00000536708 SLC24A5Q71RS6 500 aa13.71□□□□□ -0.22
CDK5RAP3-202ENST00000536708 SLC47A2Q86VL8 602 aa13.71□□□□□ -0.22
CDK5RAP3-202ENST00000536708 NT5DC4Q86YG4 428 aa13.71□□□□□ -0.22
CDK5RAP3-202ENST00000536708 RPUSD2Q8IZ73 545 aaKnown RBP13.71□□□□□ -0.22
CDK5RAP3-202ENST00000536708 MICALL1Q8N3F8 863 aa13.71□□□□□ -0.22
CDK5RAP3-202ENST00000536708 ARFGAP2Q8N6H7 521 aa13.71□□□□□ -0.22
CDK5RAP3-202ENST00000536708 BEST2Q8NFU1 509 aa13.71□□□□□ -0.22
CDK5RAP3-202ENST00000536708 HPDLQ96IR7 371 aa13.71□□□□□ -0.22
CDK5RAP3-202ENST00000536708 HMGXB4Q9UGU5 601 aa13.71□□□□□ -0.22
CDK5RAP3-202ENST00000536708 NOCTQ9UK39 431 aaKnown RBP13.71□□□□□ -0.22
CDK5RAP3-202ENST00000536708 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.7□□□□□ -0.22
CDK5RAP3-202ENST00000536708 CASTOR2A6NHX0 329 aa13.7□□□□□ -0.22
CDK5RAP3-202ENST00000536708 EBAG9O00559 213 aa13.7□□□□□ -0.22
CDK5RAP3-202ENST00000536708 SPTLC1O15269 473 aa13.7□□□□□ -0.22
CDK5RAP3-202ENST00000536708 PPFIA2O75334 1257 aa13.7□□□□□ -0.22
CDK5RAP3-202ENST00000536708 CHRNB2P17787 502 aa13.7□□□□□ -0.22
CDK5RAP3-202ENST00000536708 CDH8P55286 799 aa13.7□□□□□ -0.22
CDK5RAP3-202ENST00000536708 TMC3Q7Z5M5 1100 aa13.7□□□□□ -0.22
CDK5RAP3-202ENST00000536708 NOP9Q86U38 636 aaKnown RBP13.7□□□□□ -0.22
CDK5RAP3-202ENST00000536708 UBR7Q8N806 425 aa13.7□□□□□ -0.22
CDK5RAP3-202ENST00000536708 EPS8L1Q8TE68 723 aa13.7□□□□□ -0.22
CDK5RAP3-202ENST00000536708 SEPT8Q92599 483 aa13.7□□□□□ -0.22
CDK5RAP3-202ENST00000536708 HCSTQ9UBK5 93 aa13.7□□□□□ -0.22
CDK5RAP3-202ENST00000536708 NR2E1Q9Y466 385 aa13.7□□□□□ -0.22
CDK5RAP3-202ENST00000536708 FAM169AQ9Y6X4 670 aa13.7□□□□□ -0.22
CDK5RAP3-202ENST00000536708 GOLGA6L10A6NI86 522 aa13.69□□□□□ -0.22
CDK5RAP3-202ENST00000536708 F8W810 466 aa13.69□□□□□ -0.22
CDK5RAP3-202ENST00000536708 CXCL10P02778 98 aa13.69□□□□□ -0.22
CDK5RAP3-202ENST00000536708 MYZAPP0CAP1 466 aa13.69□□□□□ -0.22
CDK5RAP3-202ENST00000536708 CSF2RAP15509 400 aa13.69□□□□□ -0.22
CDK5RAP3-202ENST00000536708 SSTR3P32745 418 aaPredicted RBP13.69□□□□□ -0.22
CDK5RAP3-202ENST00000536708 MDH1P40925 334 aaKnown RBP13.69□□□□□ -0.22
CDK5RAP3-202ENST00000536708 ZNF844Q08AG5 666 aa13.69□□□□□ -0.22
CDK5RAP3-202ENST00000536708 ZNF394Q53GI3 561 aa13.69□□□□□ -0.22
CDK5RAP3-202ENST00000536708 ZNF667Q5HYK9 610 aa13.69□□□□□ -0.22
CDK5RAP3-202ENST00000536708 TMEM270Q6UE05 265 aa13.69□□□□□ -0.22
CDK5RAP3-202ENST00000536708 HACE1Q8IYU2 909 aa13.69□□□□□ -0.22
CDK5RAP3-202ENST00000536708 UBL4BQ8N7F7 174 aa13.69□□□□□ -0.22
CDK5RAP3-202ENST00000536708 C3orf58Q8NDZ4 430 aa13.69□□□□□ -0.22
CDK5RAP3-202ENST00000536708 ALG3Q92685 438 aa13.69□□□□□ -0.22
CDK5RAP3-202ENST00000536708 CD101Q93033 1021 aa13.69□□□□□ -0.22
CDK5RAP3-202ENST00000536708 PCDHB18PQ96TA0 734 aa13.69□□□□□ -0.22
CDK5RAP3-202ENST00000536708 ERP44Q9BS26 406 aa13.69□□□□□ -0.22
CDK5RAP3-202ENST00000536708 EPN3Q9H201 632 aa13.69□□□□□ -0.22
CDK5RAP3-202ENST00000536708 SEPT11Q9NVA2 429 aaKnown RBP13.69□□□□□ -0.22
CDK5RAP3-202ENST00000536708 GIT1Q9Y2X7 761 aa13.69□□□□□ -0.22
CDK5RAP3-202ENST00000536708 ATXN2Q99700 1313 aaKnown RBP13.69□□□□□ -0.22
CDK5RAP3-202ENST00000536708 ENPP3O14638 875 aa13.69□□□□□ -0.22
CDK5RAP3-202ENST00000536708 HCRTO43612 131 aa13.69□□□□□ -0.22
CDK5RAP3-202ENST00000536708 CYP1A2P05177 515 aa13.69□□□□□ -0.22
CDK5RAP3-202ENST00000536708 LSP1P33241 339 aa13.69□□□□□ -0.22
CDK5RAP3-202ENST00000536708 CTNNA1P35221 906 aaKnown RBP13.69□□□□□ -0.22
CDK5RAP3-202ENST00000536708 FLT3P36888 993 aa13.69□□□□□ -0.22
CDK5RAP3-202ENST00000536708 PEX5P50542 639 aa13.69□□□□□ -0.22
CDK5RAP3-202ENST00000536708 RBP5P82980 135 aa13.69□□□□□ -0.22
CDK5RAP3-202ENST00000536708 PDCLQ13371 301 aa13.69□□□□□ -0.22
CDK5RAP3-202ENST00000536708 PAN2Q504Q3 1202 aaKnown RBP13.69□□□□□ -0.22
CDK5RAP3-202ENST00000536708 TMCO2Q7Z6W1 182 aaPredicted RBP13.69□□□□□ -0.22
CDK5RAP3-202ENST00000536708 SPATS2Q86XZ4 545 aaKnown RBP13.69□□□□□ -0.22
CDK5RAP3-202ENST00000536708 ZSWIM1Q9BR11 485 aa13.69□□□□□ -0.22
CDK5RAP3-202ENST00000536708 FTHL17Q9BXU8 183 aa13.69□□□□□ -0.22
CDK5RAP3-202ENST00000536708 CISHQ9NSE2 258 aa13.69□□□□□ -0.22
CDK5RAP3-202ENST00000536708 CTTNBP2NLQ9P2B4 639 aa13.69□□□□□ -0.22
CDK5RAP3-202ENST00000536708 PCDHB4Q9Y5E5 795 aa13.69□□□□□ -0.22
CDK5RAP3-202ENST00000536708 KIAA1671Q9BY89 1806 aa13.68□□□□□ -0.22
CDK5RAP3-202ENST00000536708 VWA8A3KMH1 1905 aa13.68□□□□□ -0.22
CDK5RAP3-202ENST00000536708 THP07101 528 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms