RNA–Protein interactions for RNA: ENST00000536634.5

CLIP1-207, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 3

Gene CLIP1, Length 929 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-207ENST00000536634 FPGT-TNNI3KV9GXZ4 949 aa6.86□□□□□ -1.31
CLIP1-207ENST00000536634 SCN4AP35499 1836 aa6.85□□□□□ -1.31
CLIP1-207ENST00000536634 SOS1Q07889 1333 aaPredicted RBP6.85□□□□□ -1.31
CLIP1-207ENST00000536634 UNC119BA6NIH7 251 aa6.85□□□□□ -1.31
CLIP1-207ENST00000536634 GRM6O15303 877 aa6.85□□□□□ -1.31
CLIP1-207ENST00000536634 CFIP05156 583 aa6.85□□□□□ -1.31
CLIP1-207ENST00000536634 FXR1P51114 621 aaKnown RBP eCLIP6.85□□□□□ -1.31
CLIP1-207ENST00000536634 NOMO3P69849 1222 aa6.85□□□□□ -1.31
CLIP1-207ENST00000536634 CREMQ03060 361 aa6.85□□□□□ -1.31
CLIP1-207ENST00000536634 OCA2Q04671 838 aa6.85□□□□□ -1.31
CLIP1-207ENST00000536634 TLE1Q04724 770 aa6.85□□□□□ -1.31
CLIP1-207ENST00000536634 EIF4A2Q14240 407 aaKnown RBP6.85□□□□□ -1.31
CLIP1-207ENST00000536634 NOMO2Q5JPE7 1267 aa6.85□□□□□ -1.31
CLIP1-207ENST00000536634 TMEM240Q5SV17 173 aa6.85□□□□□ -1.31
CLIP1-207ENST00000536634 MAPKAPK5Q8IW41 473 aa6.85□□□□□ -1.31
CLIP1-207ENST00000536634 MIER2Q8N344 545 aa6.85□□□□□ -1.31
CLIP1-207ENST00000536634 HOOK2Q96ED9 719 aa6.85□□□□□ -1.31
CLIP1-207ENST00000536634 USP25Q9UHP3 1055 aa6.85□□□□□ -1.31
CLIP1-207ENST00000536634 CFAP20Q9Y6A4 193 aaKnown RBP6.85□□□□□ -1.31
CLIP1-207ENST00000536634 SLX4Q8IY92 1834 aa6.85□□□□□ -1.31
CLIP1-207ENST00000536634 A0A0C4DFX4 3053 aa6.85□□□□□ -1.31
CLIP1-207ENST00000536634 LTBP1Q14766 1721 aa6.84□□□□□ -1.31
CLIP1-207ENST00000536634 A0A1B0GTW7 788 aa6.84□□□□□ -1.31
CLIP1-207ENST00000536634 LRRC14BA6NHZ5 514 aa6.84□□□□□ -1.31
CLIP1-207ENST00000536634 ALDH1L1O75891 902 aa6.84□□□□□ -1.31
CLIP1-207ENST00000536634 SERPINB2P05120 415 aa6.84□□□□□ -1.31
CLIP1-207ENST00000536634 ALAS1P13196 640 aa6.84□□□□□ -1.31
CLIP1-207ENST00000536634 FGFR4P22455 802 aa6.84□□□□□ -1.31
CLIP1-207ENST00000536634 LY6G5CQ5SRR4 150 aa6.84□□□□□ -1.31
CLIP1-207ENST00000536634 B3GNTL1Q67FW5 361 aaPredicted RBP6.84□□□□□ -1.31
CLIP1-207ENST00000536634 DNAJC10Q8IXB1 793 aa6.84□□□□□ -1.31
CLIP1-207ENST00000536634 ULK2Q8IYT8 1036 aa6.84□□□□□ -1.31
CLIP1-207ENST00000536634 TAF1DQ9H5J8 278 aaPredicted RBP6.84□□□□□ -1.31
CLIP1-207ENST00000536634 AASDHPPTQ9NRN7 309 aa6.84□□□□□ -1.31
CLIP1-207ENST00000536634 SCN11AQ9UI33 1791 aa6.84□□□□□ -1.31
CLIP1-207ENST00000536634 HTTP42858 3142 aa6.84□□□□□ -1.31
CLIP1-207ENST00000536634 COL15A1P39059 1388 aa6.83□□□□□ -1.32
CLIP1-207ENST00000536634 WDR33Q9C0J8 1336 aaKnown RBP6.83□□□□□ -1.32
CLIP1-207ENST00000536634 ARFGEF2Q9Y6D5 1785 aa6.83□□□□□ -1.32
CLIP1-207ENST00000536634 CASP8AP2Q9UKL3 1982 aa6.83□□□□□ -1.32
CLIP1-207ENST00000536634 H0YIN7 160 aa6.83□□□□□ -1.32
CLIP1-207ENST00000536634 IL33O95760 270 aa6.83□□□□□ -1.32
CLIP1-207ENST00000536634 CD1AP06126 327 aa6.83□□□□□ -1.32
CLIP1-207ENST00000536634 DDX6P26196 483 aaKnown RBP eCLIP6.83□□□□□ -1.32
CLIP1-207ENST00000536634 BMPR1AP36894 532 aa6.83□□□□□ -1.32
CLIP1-207ENST00000536634 HSD11B2P80365 405 aa6.83□□□□□ -1.32
CLIP1-207ENST00000536634 SLFN5Q08AF3 891 aa6.83□□□□□ -1.32
CLIP1-207ENST00000536634 RESTQ13127 1097 aa6.83□□□□□ -1.32
CLIP1-207ENST00000536634 TP53BP2Q13625 1128 aa6.83□□□□□ -1.32
CLIP1-207ENST00000536634 RAB39AQ14964 217 aa6.83□□□□□ -1.32
CLIP1-207ENST00000536634 FLYWCH1Q4VC44 716 aa6.83□□□□□ -1.32
CLIP1-207ENST00000536634 PPP4R3AQ6IN85 833 aa6.83□□□□□ -1.32
CLIP1-207ENST00000536634 ZNF530Q6P9A1 599 aaPredicted RBP6.83□□□□□ -1.32
CLIP1-207ENST00000536634 GADL1Q6ZQY3 521 aa6.83□□□□□ -1.32
CLIP1-207ENST00000536634 CATIPQ7Z7H3 387 aa6.83□□□□□ -1.32
CLIP1-207ENST00000536634 FITM2Q8N6M3 262 aa6.83□□□□□ -1.32
CLIP1-207ENST00000536634 TBC1D15Q8TC07 691 aa6.83□□□□□ -1.32
CLIP1-207ENST00000536634 HSPBAP1Q96EW2 488 aa6.83□□□□□ -1.32
CLIP1-207ENST00000536634 MARS2Q96GW9 593 aaKnown RBP6.83□□□□□ -1.32
CLIP1-207ENST00000536634 VRK1Q99986 396 aaPredicted RBP6.83□□□□□ -1.32
CLIP1-207ENST00000536634 REXO4Q9GZR2 422 aaKnown RBP6.83□□□□□ -1.32
CLIP1-207ENST00000536634 RNPEPQ9H4A4 650 aa6.83□□□□□ -1.32
CLIP1-207ENST00000536634 POLKQ9UBT6 870 aa6.83□□□□□ -1.32
CLIP1-207ENST00000536634 IP6K2Q9UHH9 426 aa6.83□□□□□ -1.32
CLIP1-207ENST00000536634 NARFQ9UHQ1 456 aa6.83□□□□□ -1.32
CLIP1-207ENST00000536634 ZBTB1Q9Y2K1 713 aa6.83□□□□□ -1.32
CLIP1-207ENST00000536634 ZNF541Q9H0D2 1346 aa6.82□□□□□ -1.32
CLIP1-207ENST00000536634 SCN7AQ01118 1682 aa6.82□□□□□ -1.32
CLIP1-207ENST00000536634 PPFIA4O75335 1185 aa6.82□□□□□ -1.32
CLIP1-207ENST00000536634 SPDEFO95238 335 aa6.82□□□□□ -1.32
CLIP1-207ENST00000536634 HSP90AB1P08238 724 aaKnown RBP6.82□□□□□ -1.32
CLIP1-207ENST00000536634 CKBP12277 381 aa6.82□□□□□ -1.32
CLIP1-207ENST00000536634 NCLP19338 710 aaKnown RBP6.82□□□□□ -1.32
CLIP1-207ENST00000536634 PDCP20941 246 aa6.82□□□□□ -1.32
CLIP1-207ENST00000536634 HMGA2P52926 109 aa6.82□□□□□ -1.32
CLIP1-207ENST00000536634 DPTQ07507 201 aa6.82□□□□□ -1.32
CLIP1-207ENST00000536634 MCL1Q07820 350 aa6.82□□□□□ -1.32
CLIP1-207ENST00000536634 PTPAQ15257 358 aa6.82□□□□□ -1.32
CLIP1-207ENST00000536634 TTF1Q15361 905 aaPredicted RBP6.82□□□□□ -1.32
CLIP1-207ENST00000536634 KHDC1Q4VXA5 237 aaKnown RBP6.82□□□□□ -1.32
CLIP1-207ENST00000536634 PABPC1LQ4VXU2 614 aaKnown RBP6.82□□□□□ -1.32
CLIP1-207ENST00000536634 TTC7BQ86TV6 843 aa6.82□□□□□ -1.32
CLIP1-207ENST00000536634 ARHGEF19Q8IW93 802 aa6.82□□□□□ -1.32
CLIP1-207ENST00000536634 TMEM132CQ8N3T6 1108 aa6.82□□□□□ -1.32
CLIP1-207ENST00000536634 ZNF622Q969S3 477 aaKnown RBP eCLIP6.82□□□□□ -1.327e-7■□□□□ 9.7
CLIP1-207ENST00000536634 TAOK3Q9H2K8 898 aa6.82□□□□□ -1.32
CLIP1-207ENST00000536634 IKZF4Q9H2S9 585 aa6.82□□□□□ -1.32
CLIP1-207ENST00000536634 CALCOCO1Q9P1Z2 691 aa6.82□□□□□ -1.32
CLIP1-207ENST00000536634 HSFX1Q9UBD0 423 aa6.82□□□□□ -1.32
CLIP1-207ENST00000536634 SLC45A2Q9UMX9 530 aa6.82□□□□□ -1.32
CLIP1-207ENST00000536634 GRID2IPA4D2P6 1211 aa6.81□□□□□ -1.32
CLIP1-207ENST00000536634 HAUS5O94927 633 aa6.81□□□□□ -1.32
CLIP1-207ENST00000536634 CYP19A1P11511 503 aaPredicted RBP6.81□□□□□ -1.32
CLIP1-207ENST00000536634 MTHFD1P11586 935 aaKnown RBP6.81□□□□□ -1.32
CLIP1-207ENST00000536634 FCER1AP12319 257 aa6.81□□□□□ -1.32
CLIP1-207ENST00000536634 ZEB1P37275 1124 aaPredicted RBP6.81□□□□□ -1.32
CLIP1-207ENST00000536634 MTHFSP49914 203 aa6.81□□□□□ -1.32
CLIP1-207ENST00000536634 MAP2K1Q02750 393 aaPredicted RBP6.81□□□□□ -1.32
CLIP1-207ENST00000536634 SNAPC2Q13487 334 aa6.81□□□□□ -1.32
CLIP1-207ENST00000536634 ATP2B3Q16720 1220 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms