RNA–Protein interactions for RNA: ENST00000535993.1

CCND1-202, Transcript of cyclin D1, humanhuman

TSL 2

Gene CCND1, Length 568 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCND1-202ENST00000535993 TMEM150AQ86TG1 271 aa13.07□□□□□ -0.32
CCND1-202ENST00000535993 MON1AQ86VX9 555 aa13.07□□□□□ -0.32
CCND1-202ENST00000535993 SPATA2LQ8IUW3 424 aaPredicted RBP13.07□□□□□ -0.32
CCND1-202ENST00000535993 FUBP3Q96I24 572 aaKnown RBP eCLIP13.07□□□□□ -0.32
CCND1-202ENST00000535993 HPDLQ96IR7 371 aa13.07□□□□□ -0.32
CCND1-202ENST00000535993 TRIM9Q9C026 710 aa13.07□□□□□ -0.32
CCND1-202ENST00000535993 GKN1Q9NS71 199 aa13.07□□□□□ -0.32
CCND1-202ENST00000535993 RBM12Q9NTZ6 932 aaKnown RBP13.07□□□□□ -0.32
CCND1-202ENST00000535993 TDP1Q9NUW8 608 aa13.07□□□□□ -0.32
CCND1-202ENST00000535993 INTS13Q9NVM9 706 aa13.07□□□□□ -0.32
CCND1-202ENST00000535993 KBTBD4Q9NVX7 518 aa13.07□□□□□ -0.32
CCND1-202ENST00000535993 DLL3Q9NYJ7 618 aa13.07□□□□□ -0.32
CCND1-202ENST00000535993 SIX4Q9UIU6 781 aa13.07□□□□□ -0.32
CCND1-202ENST00000535993 FRYLO94915 3013 aa13.07□□□□□ -0.32
CCND1-202ENST00000535993 DCHS1Q96JQ0 3298 aa13.07□□□□□ -0.32
CCND1-202ENST00000535993 COL4A2P08572 1712 aa13.06□□□□□ -0.32
CCND1-202ENST00000535993 GABRDO14764 452 aa13.06□□□□□ -0.32
CCND1-202ENST00000535993 EIF3DO15371 548 aaKnown RBP eCLIP13.06□□□□□ -0.32
CCND1-202ENST00000535993 NOL4O94818 638 aa13.06□□□□□ -0.32
CCND1-202ENST00000535993 ME1P48163 572 aa13.06□□□□□ -0.32
CCND1-202ENST00000535993 GPR15P49685 360 aa13.06□□□□□ -0.32
CCND1-202ENST00000535993 GRSF1Q12849 480 aaKnown RBP eCLIP13.06□□□□□ -0.32
CCND1-202ENST00000535993 CCINQ13939 588 aa13.06□□□□□ -0.32
CCND1-202ENST00000535993 ZNF268Q14587 947 aaPredicted RBP13.06□□□□□ -0.32
CCND1-202ENST00000535993 MAPRE1Q15691 268 aaKnown RBP13.06□□□□□ -0.32
CCND1-202ENST00000535993 RSPO4Q2I0M5 234 aaPredicted RBP13.06□□□□□ -0.32
CCND1-202ENST00000535993 SOWAHAQ2M3V2 549 aa13.06□□□□□ -0.32
CCND1-202ENST00000535993 CFAP221Q4G0U5 840 aa13.06□□□□□ -0.32
CCND1-202ENST00000535993 SDHAF4Q5VUM1 108 aa13.06□□□□□ -0.32
CCND1-202ENST00000535993 TXNDC8Q6A555 127 aa13.06□□□□□ -0.32
CCND1-202ENST00000535993 LAIR1Q6GTX8 287 aa13.06□□□□□ -0.32
CCND1-202ENST00000535993 C4orf50Q6ZRC1 276 aa13.06□□□□□ -0.32
CCND1-202ENST00000535993 PRR23BQ6ZRT6 265 aa13.06□□□□□ -0.32
CCND1-202ENST00000535993 Q6ZS52 159 aa13.06□□□□□ -0.32
CCND1-202ENST00000535993 LONP2Q86WA8 852 aa13.06□□□□□ -0.32
CCND1-202ENST00000535993 USP13Q92995 863 aaPredicted RBP13.06□□□□□ -0.32
CCND1-202ENST00000535993 EXOC4Q96A65 974 aa13.06□□□□□ -0.32
CCND1-202ENST00000535993 DHX58Q96C10 678 aa13.06□□□□□ -0.32
CCND1-202ENST00000535993 TRMT2BQ96GJ1 504 aaKnown RBP13.06□□□□□ -0.32
CCND1-202ENST00000535993 MYRFLQ96LU7 910 aa13.06□□□□□ -0.32
CCND1-202ENST00000535993 PKMYT1Q99640 499 aa13.06□□□□□ -0.32
CCND1-202ENST00000535993 FAM83CQ9BQN1 747 aa13.06□□□□□ -0.32
CCND1-202ENST00000535993 HSPBP1Q9NZL4 362 aa13.06□□□□□ -0.32
CCND1-202ENST00000535993 GTF3C4Q9UKN8 822 aa13.06□□□□□ -0.32
CCND1-202ENST00000535993 USP18Q9UMW8 372 aa13.06□□□□□ -0.32
CCND1-202ENST00000535993 CCL26Q9Y258 94 aa13.06□□□□□ -0.32
CCND1-202ENST00000535993 CHURC1-FNTBB4DL54 471 aa13.05□□□□□ -0.32
CCND1-202ENST00000535993 HOXA6P31267 233 aa13.05□□□□□ -0.32
CCND1-202ENST00000535993 MAGEA11P43364 429 aa13.05□□□□□ -0.32
CCND1-202ENST00000535993 FNTBP49356 437 aa13.05□□□□□ -0.32
CCND1-202ENST00000535993 SNRPFP62306 86 aaKnown RBP13.05□□□□□ -0.32
CCND1-202ENST00000535993 RUNX3Q13761 415 aa13.05□□□□□ -0.32
CCND1-202ENST00000535993 SIM2Q14190 667 aaPredicted RBP13.05□□□□□ -0.32
CCND1-202ENST00000535993 PDGFRLQ15198 375 aa13.05□□□□□ -0.32
CCND1-202ENST00000535993 LMBRD2Q68DH5 695 aaPredicted RBP13.05□□□□□ -0.32
CCND1-202ENST00000535993 CNNM4Q6P4Q7 775 aa13.05□□□□□ -0.32
CCND1-202ENST00000535993 FAM171BQ6P995 826 aa13.05□□□□□ -0.32
CCND1-202ENST00000535993 OSTM1Q86WC4 334 aa13.05□□□□□ -0.32
CCND1-202ENST00000535993 CBWD2Q8IUF1 395 aa13.05□□□□□ -0.32
CCND1-202ENST00000535993 WDR49Q8IV35 697 aa13.05□□□□□ -0.32
CCND1-202ENST00000535993 SCN4BQ8IWT1 228 aa13.05□□□□□ -0.32
CCND1-202ENST00000535993 FSIP1Q8NA03 581 aa13.05□□□□□ -0.32
CCND1-202ENST00000535993 OR5B17Q8NGF7 314 aa13.05□□□□□ -0.32
CCND1-202ENST00000535993 HPS3Q969F9 1004 aa13.05□□□□□ -0.32
CCND1-202ENST00000535993 FAM84AQ96KN4 292 aa13.05□□□□□ -0.32
CCND1-202ENST00000535993 C7orf25Q9BPX7 421 aa13.05□□□□□ -0.32
CCND1-202ENST00000535993 SCAND2PQ9GZW5 306 aaPredicted RBP13.05□□□□□ -0.32
CCND1-202ENST00000535993 EBF3Q9H4W6 596 aa13.05□□□□□ -0.32
CCND1-202ENST00000535993 MAGEF1Q9HAY2 307 aa13.05□□□□□ -0.32
CCND1-202ENST00000535993 MAGEC2Q9UBF1 373 aaPredicted RBP13.05□□□□□ -0.32
CCND1-202ENST00000535993 CDH9Q9ULB4 789 aa13.05□□□□□ -0.32
CCND1-202ENST00000535993 NUP210Q8TEM1 1887 aaPredicted RBP13.05□□□□□ -0.32
CCND1-202ENST00000535993 DMXL1Q9Y485 3027 aa13.05□□□□□ -0.32
CCND1-202ENST00000535993 NCOR2Q9Y618 2525 aa13.04□□□□□ -0.32
CCND1-202ENST00000535993 DENND4CQ5VZ89 1909 aa13.04□□□□□ -0.32
CCND1-202ENST00000535993 TRAV19A0A0A6YYK7 116 aa13.04□□□□□ -0.32
CCND1-202ENST00000535993 FAM237AA0A1B0GTK4 181 aa13.04□□□□□ -0.32
CCND1-202ENST00000535993 K7ESF4 209 aa13.04□□□□□ -0.32
CCND1-202ENST00000535993 TRDMT1O14717 391 aaKnown RBP13.04□□□□□ -0.32
CCND1-202ENST00000535993 LRP3O75074 770 aa13.04□□□□□ -0.32
CCND1-202ENST00000535993 ATG13O75143 517 aa13.04□□□□□ -0.32
CCND1-202ENST00000535993 RETP07949 1114 aa13.04□□□□□ -0.32
CCND1-202ENST00000535993 USP17L7P0C7H9 530 aa13.04□□□□□ -0.32
CCND1-202ENST00000535993 ANP32AP39687 249 aaKnown RBP13.04□□□□□ -0.32
CCND1-202ENST00000535993 PDE6CP51160 858 aa13.04□□□□□ -0.32
CCND1-202ENST00000535993 FAM160A1Q05DH4 1040 aa13.04□□□□□ -0.32
CCND1-202ENST00000535993 SNRNP35Q16560 246 aaKnown RBP13.04□□□□□ -0.32
CCND1-202ENST00000535993 LPAL2Q16609 132 aa13.04□□□□□ -0.32
CCND1-202ENST00000535993 WDR44Q5JSH3 913 aa13.04□□□□□ -0.32
CCND1-202ENST00000535993 FAM26FQ5R3K3 315 aa13.04□□□□□ -0.32
CCND1-202ENST00000535993 SCARA3Q6AZY7 606 aa13.04□□□□□ -0.32
CCND1-202ENST00000535993 VSTM1Q6UX27 236 aa13.04□□□□□ -0.32
CCND1-202ENST00000535993 EPM2AIP1Q7L775 607 aaPredicted RBP13.04□□□□□ -0.32
CCND1-202ENST00000535993 HS2ST1Q7LGA3 356 aa13.04□□□□□ -0.32
CCND1-202ENST00000535993 LIMS2Q7Z4I7 341 aa13.04□□□□□ -0.32
CCND1-202ENST00000535993 STKLD1Q8NE28 680 aa13.04□□□□□ -0.32
CCND1-202ENST00000535993 GLIS3Q8NEA6 775 aa13.04□□□□□ -0.32
CCND1-202ENST00000535993 ZNF507Q8TCN5 953 aa13.04□□□□□ -0.32
CCND1-202ENST00000535993 SPATA32Q96LK8 384 aa13.04□□□□□ -0.32
CCND1-202ENST00000535993 CEP295NLQ96MC4 621 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms