RNA–Protein interactions for RNA: ENST00000535941.5

COL21A1-212, Transcript of collagen type XXI alpha 1 chain, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene COL21A1, Length 3,369 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-212ENST00000535941 BTBD6Q96KE9 485 aa8.46□□□□□ -1.06
COL21A1-212ENST00000535941 CAPZA3Q96KX2 299 aa8.46□□□□□ -1.06
COL21A1-212ENST00000535941 CPXM1Q96SM3 734 aa8.46□□□□□ -1.06
COL21A1-212ENST00000535941 SH3GL2Q99962 352 aa8.46□□□□□ -1.06
COL21A1-212ENST00000535941 ZDHHC18Q9NUE0 388 aa8.46□□□□□ -1.06
COL21A1-212ENST00000535941 HELZP42694 1942 aaKnown RBP8.46□□□□□ -1.06
COL21A1-212ENST00000535941 KCNK3O14649 394 aa8.45□□□□□ -1.06
COL21A1-212ENST00000535941 THAP12O43422 761 aa8.45□□□□□ -1.06
COL21A1-212ENST00000535941 RAD51CO43502 376 aa8.45□□□□□ -1.06
COL21A1-212ENST00000535941 ECM2O94769 699 aaPredicted RBP8.45□□□□□ -1.06
COL21A1-212ENST00000535941 C6orf222P0C671 652 aaPredicted RBP8.45□□□□□ -1.06
COL21A1-212ENST00000535941 NSFP46459 744 aaKnown RBP8.45□□□□□ -1.06
COL21A1-212ENST00000535941 ACLYP53396 1101 aa8.45□□□□□ -1.06
COL21A1-212ENST00000535941 CDH8P55286 799 aa8.45□□□□□ -1.06
COL21A1-212ENST00000535941 TMEM62Q0P6H9 643 aa8.45□□□□□ -1.06
COL21A1-212ENST00000535941 PDCLQ13371 301 aa8.45□□□□□ -1.06
COL21A1-212ENST00000535941 TRPC3Q13507 836 aa8.45□□□□□ -1.06
COL21A1-212ENST00000535941 DUPD1Q68J44 220 aa8.45□□□□□ -1.06
COL21A1-212ENST00000535941 TTC30AQ86WT1 665 aa8.45□□□□□ -1.06
COL21A1-212ENST00000535941 SCML4Q8N228 414 aa8.45□□□□□ -1.06
COL21A1-212ENST00000535941 KIF12Q96FN5 646 aa8.45□□□□□ -1.06
COL21A1-212ENST00000535941 PPP1R16BQ96T49 567 aa8.45□□□□□ -1.06
COL21A1-212ENST00000535941 TCHPQ9BT92 498 aa8.45□□□□□ -1.06
COL21A1-212ENST00000535941 MRPL47Q9HD33 250 aaKnown RBP8.45□□□□□ -1.06
COL21A1-212ENST00000535941 RGS18Q9NS28 235 aa8.45□□□□□ -1.06
COL21A1-212ENST00000535941 FAM105AQ9NUU6 356 aa8.45□□□□□ -1.06
COL21A1-212ENST00000535941 ST3GAL5Q9UNP4 418 aa8.45□□□□□ -1.06
COL21A1-212ENST00000535941 EFR3BQ9Y2G0 817 aa8.45□□□□□ -1.06
COL21A1-212ENST00000535941 NYNRINQ9P2P1 1898 aaKnown RBP8.45□□□□□ -1.06
COL21A1-212ENST00000535941 TTC3P53804 2025 aa8.45□□□□□ -1.06
COL21A1-212ENST00000535941 M0QZQ0 153 aa8.45□□□□□ -1.06
COL21A1-212ENST00000535941 PHF2O75151 1096 aa8.45□□□□□ -1.06
COL21A1-212ENST00000535941 ITGA4P13612 1032 aa8.45□□□□□ -1.06
COL21A1-212ENST00000535941 IBSPP21815 317 aaPredicted RBP8.45□□□□□ -1.06
COL21A1-212ENST00000535941 RAB27AP51159 221 aa8.45□□□□□ -1.06
COL21A1-212ENST00000535941 NDST1P52848 882 aa8.45□□□□□ -1.06
COL21A1-212ENST00000535941 TAS2R40P59535 323 aa8.45□□□□□ -1.06
COL21A1-212ENST00000535941 OSTNP61366 133 aa8.45□□□□□ -1.06
COL21A1-212ENST00000535941 PPP2R5EQ16537 467 aa8.45□□□□□ -1.06
COL21A1-212ENST00000535941 WDR72Q3MJ13 1102 aa8.45□□□□□ -1.06
COL21A1-212ENST00000535941 GNASQ5JWF2 1037 aa8.45□□□□□ -1.06
COL21A1-212ENST00000535941 C1orf53Q5VUE5 145 aa8.45□□□□□ -1.06
COL21A1-212ENST00000535941 TTC27Q6P3X3 843 aa8.45□□□□□ -1.06
COL21A1-212ENST00000535941 TMEM35BQ8NCS4 154 aa8.45□□□□□ -1.06
COL21A1-212ENST00000535941 BEST2Q8NFU1 509 aa8.45□□□□□ -1.06
COL21A1-212ENST00000535941 FAM129AQ9BZQ8 928 aa8.45□□□□□ -1.06
COL21A1-212ENST00000535941 FAM49AQ9H0Q0 323 aaPredicted RBP8.45□□□□□ -1.06
COL21A1-212ENST00000535941 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.45□□□□□ -1.06
COL21A1-212ENST00000535941 WDR35Q9P2L0 1181 aa8.45□□□□□ -1.06
COL21A1-212ENST00000535941 STRIP2Q9ULQ0 834 aa8.45□□□□□ -1.06
COL21A1-212ENST00000535941 AGAP1Q9UPQ3 857 aa8.45□□□□□ -1.06
COL21A1-212ENST00000535941 DOCK4Q8N1I0 1966 aa8.45□□□□□ -1.06
COL21A1-212ENST00000535941 TMEM189-UBE2V1I3L0A0 370 aa8.45□□□□□ -1.06
COL21A1-212ENST00000535941 NEBLO76041 1014 aa8.45□□□□□ -1.06
COL21A1-212ENST00000535941 P4HA1P13674 534 aa8.45□□□□□ -1.06
COL21A1-212ENST00000535941 UPP1Q16831 310 aa8.45□□□□□ -1.06
COL21A1-212ENST00000535941 KIAA0319Q5VV43 1072 aa8.45□□□□□ -1.06
COL21A1-212ENST00000535941 PAQR9Q6ZVX9 377 aa8.45□□□□□ -1.06
COL21A1-212ENST00000535941 SLC13A5Q86YT5 568 aaPredicted RBP8.45□□□□□ -1.06
COL21A1-212ENST00000535941 EXD1Q8NHP7 514 aa8.45□□□□□ -1.06
COL21A1-212ENST00000535941 PPP1R13LQ8WUF5 828 aa8.45□□□□□ -1.06
COL21A1-212ENST00000535941 CASKIN2Q8WXE0 1202 aa8.45□□□□□ -1.06
COL21A1-212ENST00000535941 NT5C3BQ969T7 300 aa8.45□□□□□ -1.06
COL21A1-212ENST00000535941 SELENOOQ9BVL4 669 aa8.45□□□□□ -1.06
COL21A1-212ENST00000535941 ACBD3Q9H3P7 528 aa8.45□□□□□ -1.06
COL21A1-212ENST00000535941 ADAM22Q9P0K1 906 aa8.45□□□□□ -1.06
COL21A1-212ENST00000535941 CTTNBP2NLQ9P2B4 639 aa8.45□□□□□ -1.06
COL21A1-212ENST00000535941 TJP2Q9UDY2 1190 aa8.45□□□□□ -1.06
COL21A1-212ENST00000535941 IP6K2Q9UHH9 426 aa8.45□□□□□ -1.06
COL21A1-212ENST00000535941 FAN1Q9Y2M0 1017 aa8.45□□□□□ -1.06
COL21A1-212ENST00000535941 A0A0U1RQF3 1178 aa8.44□□□□□ -1.06
COL21A1-212ENST00000535941 A0A1W2PQ45 241 aaPredicted RBP8.44□□□□□ -1.06
COL21A1-212ENST00000535941 A0A1W2PQY0 241 aa8.44□□□□□ -1.06
COL21A1-212ENST00000535941 AGPSO00116 658 aa8.44□□□□□ -1.06
COL21A1-212ENST00000535941 ELNP15502 786 aa8.44□□□□□ -1.06
COL21A1-212ENST00000535941 FNTAP49354 379 aa8.44□□□□□ -1.06
COL21A1-212ENST00000535941 LILRA4P59901 499 aa8.44□□□□□ -1.06
COL21A1-212ENST00000535941 COPS2P61201 443 aa8.44□□□□□ -1.06
COL21A1-212ENST00000535941 RPL7AP62424 266 aaKnown RBP8.44□□□□□ -1.06
COL21A1-212ENST00000535941 EIF4EBP2Q13542 120 aaPredicted RBP8.44□□□□□ -1.06
COL21A1-212ENST00000535941 DHX34Q14147 1143 aaKnown RBP8.44□□□□□ -1.06
COL21A1-212ENST00000535941 RAB41Q5JT25 222 aa8.44□□□□□ -1.06
COL21A1-212ENST00000535941 BHLHA9Q7RTU4 235 aa8.44□□□□□ -1.06
COL21A1-212ENST00000535941 OSTM1Q86WC4 334 aa8.44□□□□□ -1.06
COL21A1-212ENST00000535941 VWCEQ96DN2 955 aa8.44□□□□□ -1.06
COL21A1-212ENST00000535941 RTP3Q9BQQ7 232 aa8.44□□□□□ -1.06
COL21A1-212ENST00000535941 MIOSQ9NXC5 875 aa8.44□□□□□ -1.06
COL21A1-212ENST00000535941 PIN4Q9Y237 131 aaKnown RBP8.44□□□□□ -1.06
COL21A1-212ENST00000535941 HES2Q9Y543 173 aa8.44□□□□□ -1.06
COL21A1-212ENST00000535941 ANAPC1Q9H1A4 1944 aa8.44□□□□□ -1.06
COL21A1-212ENST00000535941 MEIS3P2A8K0S8 358 aa8.44□□□□□ -1.06
COL21A1-212ENST00000535941 IVDP26440 423 aa8.44□□□□□ -1.06
COL21A1-212ENST00000535941 DSC1Q08554 894 aa8.44□□□□□ -1.06
COL21A1-212ENST00000535941 ITGA7Q13683 1181 aa8.44□□□□□ -1.06
COL21A1-212ENST00000535941 AADACL2Q6P093 401 aa8.44□□□□□ -1.06
COL21A1-212ENST00000535941 RHBDF2Q6PJF5 856 aa8.44□□□□□ -1.06
COL21A1-212ENST00000535941 ARMCX6Q7L4S7 300 aa8.44□□□□□ -1.06
COL21A1-212ENST00000535941 RTN4RL1Q86UN2 441 aaPredicted RBP8.44□□□□□ -1.06
COL21A1-212ENST00000535941 UBL4BQ8N7F7 174 aa8.44□□□□□ -1.06
COL21A1-212ENST00000535941 KCTD13Q8WZ19 329 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms