RNA–Protein interactions for RNA: ENST00000535106.5

VPS45-211, Transcript of vacuolar protein sorting 45 homolog, humanhuman

TSL 5 BASIC

Gene VPS45, Length 2,695 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45-211ENST00000535106 GJA3Q9Y6H8 435 aa12.69□□□□□ -0.38
VPS45-211ENST00000535106 LCTP09848 1927 aa12.69□□□□□ -0.38
VPS45-211ENST00000535106 NFKBIEO00221 500 aa12.69□□□□□ -0.38
VPS45-211ENST00000535106 FARP2O94887 1054 aaPredicted RBP12.69□□□□□ -0.38
VPS45-211ENST00000535106 LSM8O95777 96 aaKnown RBP12.69□□□□□ -0.38
VPS45-211ENST00000535106 CD48P09326 243 aa12.69□□□□□ -0.38
VPS45-211ENST00000535106 CCNB1P14635 433 aa12.69□□□□□ -0.38
VPS45-211ENST00000535106 SSTR1P30872 391 aa12.69□□□□□ -0.38
VPS45-211ENST00000535106 NRLP54845 237 aa12.69□□□□□ -0.38
VPS45-211ENST00000535106 TFAMQ00059 246 aaKnown RBP12.69□□□□□ -0.38
VPS45-211ENST00000535106 ORC1Q13415 861 aa12.69□□□□□ -0.38
VPS45-211ENST00000535106 PIGHQ14442 188 aaPredicted RBP12.69□□□□□ -0.38
VPS45-211ENST00000535106 CDR2LQ86X02 465 aaPredicted RBP12.69□□□□□ -0.38
VPS45-211ENST00000535106 ACTL9Q8TC94 416 aa12.69□□□□□ -0.38
VPS45-211ENST00000535106 L3MBTL3Q96JM7 780 aaPredicted RBP12.69□□□□□ -0.38
VPS45-211ENST00000535106 PLCD4Q9BRC7 762 aa12.69□□□□□ -0.38
VPS45-211ENST00000535106 FAM167BQ9BTA0 163 aa12.69□□□□□ -0.38
VPS45-211ENST00000535106 C12orf65Q9H3J6 166 aaKnown RBP12.69□□□□□ -0.38
VPS45-211ENST00000535106 PCDH9Q9HC56 1237 aa12.69□□□□□ -0.38
VPS45-211ENST00000535106 CHKBQ9Y259 395 aa12.69□□□□□ -0.38
VPS45-211ENST00000535106 FARP1Q9Y4F1 1045 aaPredicted RBP12.69□□□□□ -0.38
VPS45-211ENST00000535106 TCRBV7S3A2A0A539 114 aa12.68□□□□□ -0.38
VPS45-211ENST00000535106 ABLIM1O14639 778 aa12.68□□□□□ -0.38
VPS45-211ENST00000535106 TYROBPO43914 113 aa12.68□□□□□ -0.38
VPS45-211ENST00000535106 PTPN7P35236 360 aa12.68□□□□□ -0.38
VPS45-211ENST00000535106 MSH2P43246 934 aa12.68□□□□□ -0.38
VPS45-211ENST00000535106 ASPAP45381 313 aa12.68□□□□□ -0.38
VPS45-211ENST00000535106 RAP1GAPP47736 663 aa12.68□□□□□ -0.38
VPS45-211ENST00000535106 OSTNP61366 133 aa12.68□□□□□ -0.38
VPS45-211ENST00000535106 OTUD4Q01804 1114 aaKnown RBP12.68□□□□□ -0.38
VPS45-211ENST00000535106 SLC25A11Q02978 314 aaKnown RBP12.68□□□□□ -0.38
VPS45-211ENST00000535106 MOGSQ13724 837 aa12.68□□□□□ -0.38
VPS45-211ENST00000535106 TFDP1Q14186 410 aa12.68□□□□□ -0.38
VPS45-211ENST00000535106 DCAF15Q66K64 600 aa12.68□□□□□ -0.38
VPS45-211ENST00000535106 ZNF772Q68DY9 489 aaPredicted RBP12.68□□□□□ -0.38
VPS45-211ENST00000535106 PPP1R2P3Q6NXS1 205 aa12.68□□□□□ -0.38
VPS45-211ENST00000535106 EEPD1Q7L9B9 569 aa12.68□□□□□ -0.38
VPS45-211ENST00000535106 EMC1Q8N766 993 aa12.68□□□□□ -0.38
VPS45-211ENST00000535106 ACO2Q99798 780 aaKnown RBP12.68□□□□□ -0.38
VPS45-211ENST00000535106 XYLT2Q9H1B5 865 aa12.68□□□□□ -0.38
VPS45-211ENST00000535106 POLIQ9UNA4 740 aa12.68□□□□□ -0.38
VPS45-211ENST00000535106 STARD13Q9Y3M8 1113 aa12.68□□□□□ -0.38
VPS45-211ENST00000535106 DIAPH2O60879 1101 aa12.68□□□□□ -0.38
VPS45-211ENST00000535106 LRCH4O75427 683 aa12.68□□□□□ -0.38
VPS45-211ENST00000535106 TOM1L1O75674 476 aa12.68□□□□□ -0.38
VPS45-211ENST00000535106 SMNDC1O75940 238 aaKnown RBP eCLIP12.68□□□□□ -0.38
VPS45-211ENST00000535106 UNC5CO95185 931 aa12.68□□□□□ -0.38
VPS45-211ENST00000535106 CA4P22748 312 aa12.68□□□□□ -0.38
VPS45-211ENST00000535106 PSMA2P25787 234 aa12.68□□□□□ -0.38
VPS45-211ENST00000535106 MARK3P27448 753 aa12.68□□□□□ -0.38
VPS45-211ENST00000535106 CDH5P33151 784 aaPredicted RBP12.68□□□□□ -0.38
VPS45-211ENST00000535106 CTCFP49711 727 aaPredicted RBP12.68□□□□□ -0.38
VPS45-211ENST00000535106 STAT5BP51692 787 aa12.68□□□□□ -0.38
VPS45-211ENST00000535106 NR1H3Q13133 447 aa12.68□□□□□ -0.38
VPS45-211ENST00000535106 SPARCL1Q14515 664 aa12.68□□□□□ -0.38
VPS45-211ENST00000535106 TAF5Q15542 800 aa12.68□□□□□ -0.38
VPS45-211ENST00000535106 ZPBP2Q6X784 338 aa12.68□□□□□ -0.38
VPS45-211ENST00000535106 CENPUQ71F23 418 aa12.68□□□□□ -0.38
VPS45-211ENST00000535106 LRRC71Q8N4P6 559 aa12.68□□□□□ -0.38
VPS45-211ENST00000535106 NIPA2Q8N8Q9 360 aa12.68□□□□□ -0.38
VPS45-211ENST00000535106 CPT1BQ92523 772 aa12.68□□□□□ -0.38
VPS45-211ENST00000535106 GRAMD1AQ96CP6 724 aa12.68□□□□□ -0.38
VPS45-211ENST00000535106 ERP27Q96DN0 273 aa12.68□□□□□ -0.38
VPS45-211ENST00000535106 SMC6Q96SB8 1091 aa12.68□□□□□ -0.38
VPS45-211ENST00000535106 R3HDMLQ9H3Y0 253 aa12.68□□□□□ -0.38
VPS45-211ENST00000535106 ETNK1Q9HBU6 452 aa12.68□□□□□ -0.38
VPS45-211ENST00000535106 UBN1Q9NPG3 1134 aa12.68□□□□□ -0.38
VPS45-211ENST00000535106 IRAK4Q9NWZ3 460 aa12.68□□□□□ -0.38
VPS45-211ENST00000535106 RABGEF1Q9UJ41 708 aa12.68□□□□□ -0.38
VPS45-211ENST00000535106 SHOC2Q9UQ13 582 aa12.68□□□□□ -0.38
VPS45-211ENST00000535106 SIP14410 1827 aa12.68□□□□□ -0.38
VPS45-211ENST00000535106 CST8O60676 142 aa12.67□□□□□ -0.38
VPS45-211ENST00000535106 MAFO75444 373 aaPredicted RBP12.67□□□□□ -0.38
VPS45-211ENST00000535106 GJB1P08034 283 aa12.67□□□□□ -0.38
VPS45-211ENST00000535106 HOXC6P09630 235 aa12.67□□□□□ -0.38
VPS45-211ENST00000535106 KRT4P19013 534 aa12.67□□□□□ -0.38
VPS45-211ENST00000535106 EIF4BP23588 611 aaKnown RBP12.67□□□□□ -0.38
VPS45-211ENST00000535106 RFC5P40937 340 aa12.67□□□□□ -0.38
VPS45-211ENST00000535106 PRKG1Q13976 671 aa12.67□□□□□ -0.38
VPS45-211ENST00000535106 PDK4Q16654 411 aa12.67□□□□□ -0.38
VPS45-211ENST00000535106 HIF1AQ16665 826 aa12.67□□□□□ -0.38
VPS45-211ENST00000535106 DUOXA2Q1HG44 320 aa12.67□□□□□ -0.38
VPS45-211ENST00000535106 SGSM1Q2NKQ1 1148 aa12.67□□□□□ -0.38
VPS45-211ENST00000535106 CEP128Q6ZU80 1094 aa12.67□□□□□ -0.38
VPS45-211ENST00000535106 TRIM50Q86XT4 487 aa12.67□□□□□ -0.38
VPS45-211ENST00000535106 DDX56Q9NY93 547 aaKnown RBP12.67□□□□□ -0.38
VPS45-211ENST00000535106 PIM2Q9P1W9 311 aa12.67□□□□□ -0.38
VPS45-211ENST00000535106 NXF1Q9UBU9 619 aaKnown RBP12.67□□□□□ -0.38
VPS45-211ENST00000535106 CPSF3Q9UKF6 684 aaKnown RBP12.67□□□□□ -0.38
VPS45-211ENST00000535106 DOCK1Q14185 1865 aa12.67□□□□□ -0.38
VPS45-211ENST00000535106 C19orf81C9J6K1 198 aa12.67□□□□□ -0.38
VPS45-211ENST00000535106 MAP3K13O43283 966 aa12.67□□□□□ -0.38
VPS45-211ENST00000535106 EDF1O60869 148 aaKnown RBP12.67□□□□□ -0.38
VPS45-211ENST00000535106 RPL22P35268 128 aaKnown RBP12.67□□□□□ -0.38
VPS45-211ENST00000535106 TCF7P36402 384 aaPredicted RBP12.67□□□□□ -0.38
VPS45-211ENST00000535106 CDH8P55286 799 aa12.67□□□□□ -0.38
VPS45-211ENST00000535106 TRPC3Q13507 836 aa12.67□□□□□ -0.38
VPS45-211ENST00000535106 LY6KQ17RY6 165 aa12.67□□□□□ -0.38
VPS45-211ENST00000535106 ZNF699Q32M78 642 aa12.67□□□□□ -0.38
VPS45-211ENST00000535106 EFHC2Q5JST6 749 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms