RNA–Protein interactions for RNA: ENST00000533012.1

TRAPPC4-211, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-211ENST00000533012 SFXN1Q9H9B4 322 aa11.95□□□□□ -0.5
TRAPPC4-211ENST00000533012 ZDHHC7Q9NXF8 308 aa11.95□□□□□ -0.5
TRAPPC4-211ENST00000533012 CLEC1BQ9P126 229 aa11.95□□□□□ -0.5
TRAPPC4-211ENST00000533012 CNTN6Q9UQ52 1028 aa11.95□□□□□ -0.5
TRAPPC4-211ENST00000533012 RNF225M0QZC1 329 aaPredicted RBP11.94□□□□□ -0.5
TRAPPC4-211ENST00000533012 FOXN3O00409 490 aaPredicted RBP11.94□□□□□ -0.5
TRAPPC4-211ENST00000533012 RFPL2O75678 378 aa11.94□□□□□ -0.5
TRAPPC4-211ENST00000533012 NOL4O94818 638 aa11.94□□□□□ -0.5
TRAPPC4-211ENST00000533012 VNN2O95498 520 aa11.94□□□□□ -0.5
TRAPPC4-211ENST00000533012 PAEPP09466 180 aa11.94□□□□□ -0.5
TRAPPC4-211ENST00000533012 HAPLN1P10915 354 aaPredicted RBP11.94□□□□□ -0.5
TRAPPC4-211ENST00000533012 VDRP11473 427 aa11.94□□□□□ -0.5
TRAPPC4-211ENST00000533012 CD19P15391 556 aa11.94□□□□□ -0.5
TRAPPC4-211ENST00000533012 KCNA5P22460 613 aa11.94□□□□□ -0.5
TRAPPC4-211ENST00000533012 BDNFP23560 247 aa11.94□□□□□ -0.5
TRAPPC4-211ENST00000533012 CYP2F1P24903 491 aa11.94□□□□□ -0.5
TRAPPC4-211ENST00000533012 HOXA9P31269 272 aa11.94□□□□□ -0.5
TRAPPC4-211ENST00000533012 GRIK1P39086 918 aa11.94□□□□□ -0.5
TRAPPC4-211ENST00000533012 MAGEA11P43364 429 aa11.94□□□□□ -0.5
TRAPPC4-211ENST00000533012 EPHB3P54753 998 aa11.94□□□□□ -0.5
TRAPPC4-211ENST00000533012 RPL10AP62906 217 aaKnown RBP11.94□□□□□ -0.5
TRAPPC4-211ENST00000533012 ITIH3Q06033 890 aa11.94□□□□□ -0.5
TRAPPC4-211ENST00000533012 CCDC142Q17RM4 750 aa11.94□□□□□ -0.5
TRAPPC4-211ENST00000533012 SGO2Q562F6 1265 aa11.94□□□□□ -0.5
TRAPPC4-211ENST00000533012 CES5AQ6NT32 575 aa11.94□□□□□ -0.5
TRAPPC4-211ENST00000533012 SYCE2Q6PIF2 218 aa11.94□□□□□ -0.5
TRAPPC4-211ENST00000533012 VSTM1Q6UX27 236 aa11.94□□□□□ -0.5
TRAPPC4-211ENST00000533012 TMC5Q6UXY8 1006 aa11.94□□□□□ -0.5
TRAPPC4-211ENST00000533012 CYP26C1Q6V0L0 522 aa11.94□□□□□ -0.5
TRAPPC4-211ENST00000533012 CACNA2D4Q7Z3S7 1137 aa11.94□□□□□ -0.5
TRAPPC4-211ENST00000533012 ELMOD1Q8N336 334 aa11.94□□□□□ -0.5
TRAPPC4-211ENST00000533012 C12orf76Q8N812 135 aaPredicted RBP11.94□□□□□ -0.5
TRAPPC4-211ENST00000533012 RBBP8NLQ8NC74 664 aaPredicted RBP11.94□□□□□ -0.5
TRAPPC4-211ENST00000533012 CMASQ8NFW8 434 aaPredicted RBP11.94□□□□□ -0.5
TRAPPC4-211ENST00000533012 SHC3Q92529 594 aa11.94□□□□□ -0.5
TRAPPC4-211ENST00000533012 ZNF512Q96ME7 567 aaPredicted RBP11.94□□□□□ -0.5
TRAPPC4-211ENST00000533012 HNRNPABQ99729 332 aaKnown RBP11.94□□□□□ -0.5
TRAPPC4-211ENST00000533012 NUP58Q9BVL2 599 aa11.94□□□□□ -0.5
TRAPPC4-211ENST00000533012 NAA15Q9BXJ9 866 aaKnown RBP11.94□□□□□ -0.5
TRAPPC4-211ENST00000533012 PRKD2Q9BZL6 878 aa11.94□□□□□ -0.5
TRAPPC4-211ENST00000533012 XPO4Q9C0E2 1151 aaKnown RBP11.94□□□□□ -0.5
TRAPPC4-211ENST00000533012 CRISPLD1Q9H336 500 aa11.94□□□□□ -0.5
TRAPPC4-211ENST00000533012 GRPEL1Q9HAV7 217 aa11.94□□□□□ -0.5
TRAPPC4-211ENST00000533012 PIDD1Q9HB75 910 aa11.94□□□□□ -0.5
TRAPPC4-211ENST00000533012 INSL5Q9Y5Q6 135 aa11.94□□□□□ -0.5
TRAPPC4-211ENST00000533012 FHOD1Q9Y613 1164 aa11.94□□□□□ -0.5
TRAPPC4-211ENST00000533012 H3BQ06 376 aaPredicted RBP11.93□□□□□ -0.5
TRAPPC4-211ENST00000533012 CLDN5O00501 218 aa11.93□□□□□ -0.5
TRAPPC4-211ENST00000533012 CCL16O15467 120 aa11.93□□□□□ -0.5
TRAPPC4-211ENST00000533012 XYLBO75191 536 aa11.93□□□□□ -0.5
TRAPPC4-211ENST00000533012 TBX10O75333 385 aa11.93□□□□□ -0.5
TRAPPC4-211ENST00000533012 CCDC130P13994 396 aa11.93□□□□□ -0.5
TRAPPC4-211ENST00000533012 BPIFB4P59827 614 aa11.93□□□□□ -0.5
TRAPPC4-211ENST00000533012 PTK2Q05397 1052 aa11.93□□□□□ -0.5
TRAPPC4-211ENST00000533012 TWF1Q12792 350 aa11.93□□□□□ -0.5
TRAPPC4-211ENST00000533012 TAF12Q16514 161 aa11.93□□□□□ -0.5
TRAPPC4-211ENST00000533012 PTPN21Q16825 1174 aa11.93□□□□□ -0.5
TRAPPC4-211ENST00000533012 ATAT1Q5SQI0 421 aa11.93□□□□□ -0.5
TRAPPC4-211ENST00000533012 RARS2Q5T160 578 aaKnown RBP11.93□□□□□ -0.5
TRAPPC4-211ENST00000533012 ARHGAP17Q68EM7 881 aa11.93□□□□□ -0.5
TRAPPC4-211ENST00000533012 SARM1Q6SZW1 724 aa11.93□□□□□ -0.5
TRAPPC4-211ENST00000533012 SCN4BQ8IWT1 228 aa11.93□□□□□ -0.5
TRAPPC4-211ENST00000533012 FUKQ8N0W3 1084 aa11.93□□□□□ -0.5
TRAPPC4-211ENST00000533012 SLC2A14Q8TDB8 520 aa11.93□□□□□ -0.5
TRAPPC4-211ENST00000533012 SMARCD1Q96GM5 515 aa11.93□□□□□ -0.5
TRAPPC4-211ENST00000533012 MSLNLQ96KJ4 702 aa11.93□□□□□ -0.5
TRAPPC4-211ENST00000533012 SPAG5Q96R06 1193 aa11.93□□□□□ -0.5
TRAPPC4-211ENST00000533012 APOL5Q9BWW9 433 aa11.93□□□□□ -0.5
TRAPPC4-211ENST00000533012 TRIM5Q9C035 493 aa11.93□□□□□ -0.5
TRAPPC4-211ENST00000533012 ZNF518BQ9C0D4 1074 aa11.93□□□□□ -0.5
TRAPPC4-211ENST00000533012 GANQ9H2C0 597 aa11.93□□□□□ -0.5
TRAPPC4-211ENST00000533012 ADAM7Q9H2U9 754 aa11.93□□□□□ -0.5
TRAPPC4-211ENST00000533012 NLRC4Q9NPP4 1024 aa11.93□□□□□ -0.5
TRAPPC4-211ENST00000533012 FAM49BQ9NUQ9 324 aa11.93□□□□□ -0.5
TRAPPC4-211ENST00000533012 CEP72Q9P209 647 aa11.93□□□□□ -0.5
TRAPPC4-211ENST00000533012 CD207Q9UJ71 328 aa11.93□□□□□ -0.5
TRAPPC4-211ENST00000533012 AJAP1Q9UKB5 411 aaPredicted RBP11.93□□□□□ -0.5
TRAPPC4-211ENST00000533012 YIPF1Q9Y548 306 aa11.93□□□□□ -0.5
TRAPPC4-211ENST00000533012 ASB3Q9Y575 518 aa11.93□□□□□ -0.5
TRAPPC4-211ENST00000533012 VWA8A3KMH1 1905 aa11.93□□□□□ -0.5
TRAPPC4-211ENST00000533012 MYO9BQ13459 2157 aa11.92□□□□□ -0.5
TRAPPC4-211ENST00000533012 TRIM66O15016 1216 aa11.92□□□□□ -0.5
TRAPPC4-211ENST00000533012 EPHB6O15197 1021 aa11.92□□□□□ -0.5
TRAPPC4-211ENST00000533012 CYP26A1O43174 497 aa11.92□□□□□ -0.5
TRAPPC4-211ENST00000533012 MED7O43513 233 aa11.92□□□□□ -0.5
TRAPPC4-211ENST00000533012 SOAT2O75908 522 aa11.92□□□□□ -0.5
TRAPPC4-211ENST00000533012 POU2F2P09086 479 aa11.92□□□□□ -0.5
TRAPPC4-211ENST00000533012 ANXA13P27216 316 aa11.92□□□□□ -0.5
TRAPPC4-211ENST00000533012 ADORA2BP29275 332 aa11.92□□□□□ -0.5
TRAPPC4-211ENST00000533012 STAT1P42224 750 aa11.92□□□□□ -0.5
TRAPPC4-211ENST00000533012 ZNF132P52740 706 aa11.92□□□□□ -0.5
TRAPPC4-211ENST00000533012 SLC8A3P57103 927 aa11.92□□□□□ -0.5
TRAPPC4-211ENST00000533012 VEPH1Q14D04 833 aa11.92□□□□□ -0.5
TRAPPC4-211ENST00000533012 STILQ15468 1287 aa11.92□□□□□ -0.5
TRAPPC4-211ENST00000533012 CLUL1Q15846 466 aa11.92□□□□□ -0.5
TRAPPC4-211ENST00000533012 CNGA2Q16280 664 aa11.92□□□□□ -0.5
TRAPPC4-211ENST00000533012 DDR2Q16832 855 aa11.92□□□□□ -0.5
TRAPPC4-211ENST00000533012 PPP1R26Q5T8A7 1209 aaPredicted RBP11.92□□□□□ -0.5
TRAPPC4-211ENST00000533012 PAQR9Q6ZVX9 377 aa11.92□□□□□ -0.5
TRAPPC4-211ENST00000533012 GPR149Q86SP6 731 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms