RNA–Protein interactions for RNA: ENST00000532149.1

CHD7-211, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 2

Gene CHD7, Length 616 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-211ENST00000532149 TMEM86AQ8N2M4 240 aa12.96□□□□□ -0.33
CHD7-211ENST00000532149 PRELID2Q8N945 189 aa12.96□□□□□ -0.33
CHD7-211ENST00000532149 PXYLP1Q8TE99 480 aa12.96□□□□□ -0.33
CHD7-211ENST00000532149 CASKIN2Q8WXE0 1202 aa12.96□□□□□ -0.33
CHD7-211ENST00000532149 PGBD4Q96DM1 585 aa12.96□□□□□ -0.33
CHD7-211ENST00000532149 HSFY1Q96LI6 401 aa12.96□□□□□ -0.33
CHD7-211ENST00000532149 TBCBQ99426 244 aa12.96□□□□□ -0.33
CHD7-211ENST00000532149 FMO2Q99518 471 aa12.96□□□□□ -0.33
CHD7-211ENST00000532149 SH3GL2Q99962 352 aa12.96□□□□□ -0.33
CHD7-211ENST00000532149 OSBPL8Q9BZF1 889 aa12.96□□□□□ -0.33
CHD7-211ENST00000532149 GPBP1L1Q9HC44 474 aaPredicted RBP12.96□□□□□ -0.33
CHD7-211ENST00000532149 SMIM28A0A1B0GU29 152 aa12.95□□□□□ -0.34
CHD7-211ENST00000532149 MOXD2PA6NHM9 499 aa12.95□□□□□ -0.34
CHD7-211ENST00000532149 KPNA7A9QM74 516 aa12.95□□□□□ -0.34
CHD7-211ENST00000532149 TTI1O43156 1089 aa12.95□□□□□ -0.34
CHD7-211ENST00000532149 HUS1O60921 280 aa12.95□□□□□ -0.34
CHD7-211ENST00000532149 RPS6KA5O75582 802 aa12.95□□□□□ -0.34
CHD7-211ENST00000532149 RECQL4O94761 1208 aa12.95□□□□□ -0.34
CHD7-211ENST00000532149 MICAL2O94851 1124 aa12.95□□□□□ -0.34
CHD7-211ENST00000532149 FLT3LGP49771 235 aa12.95□□□□□ -0.34
CHD7-211ENST00000532149 NDST1P52848 882 aa12.95□□□□□ -0.34
CHD7-211ENST00000532149 NFX1Q12986 1120 aaKnown RBP12.95□□□□□ -0.34
CHD7-211ENST00000532149 PTK7Q13308 1070 aa12.95□□□□□ -0.34
CHD7-211ENST00000532149 TERF2Q15554 542 aa12.95□□□□□ -0.34
CHD7-211ENST00000532149 BOLA3Q53S33 107 aa12.95□□□□□ -0.34
CHD7-211ENST00000532149 TFDP3Q5H9I0 405 aa12.95□□□□□ -0.34
CHD7-211ENST00000532149 TMEM110Q86TL2 294 aa12.95□□□□□ -0.34
CHD7-211ENST00000532149 PASD1Q8IV76 773 aa12.95□□□□□ -0.34
CHD7-211ENST00000532149 WDTC1Q8N5D0 677 aa12.95□□□□□ -0.34
CHD7-211ENST00000532149 ARFGAP2Q8N6H7 521 aa12.95□□□□□ -0.34
CHD7-211ENST00000532149 KLHDC9Q8NEP7 349 aa12.95□□□□□ -0.34
CHD7-211ENST00000532149 APPL2Q8NEU8 664 aa12.95□□□□□ -0.34
CHD7-211ENST00000532149 TFAP2BQ92481 460 aa12.95□□□□□ -0.34
CHD7-211ENST00000532149 CNPY3Q9BT09 278 aa12.95□□□□□ -0.34
CHD7-211ENST00000532149 STMN4Q9H169 189 aaPredicted RBP12.95□□□□□ -0.34
CHD7-211ENST00000532149 SMARCAL1Q9NZC9 954 aa12.95□□□□□ -0.34
CHD7-211ENST00000532149 POLIQ9UNA4 740 aa12.95□□□□□ -0.34
CHD7-211ENST00000532149 PDCD11Q14690 1871 aaKnown RBP12.94□□□□□ -0.34
CHD7-211ENST00000532149 HMGB1P1B2RPK0 211 aaPredicted RBP12.94□□□□□ -0.34
CHD7-211ENST00000532149 M0QYV0 167 aa12.94□□□□□ -0.34
CHD7-211ENST00000532149 ITGA4P13612 1032 aa12.94□□□□□ -0.34
CHD7-211ENST00000532149 WARSP23381 471 aaKnown RBP12.94□□□□□ -0.34
CHD7-211ENST00000532149 GNL1P36915 607 aaPredicted RBP12.94□□□□□ -0.34
CHD7-211ENST00000532149 PTGIRP43119 386 aa12.94□□□□□ -0.34
CHD7-211ENST00000532149 LHX1P48742 406 aa12.94□□□□□ -0.34
CHD7-211ENST00000532149 RPL34P49207 117 aaKnown RBP12.94□□□□□ -0.34
CHD7-211ENST00000532149 CDR1P51861 262 aa12.94□□□□□ -0.34
CHD7-211ENST00000532149 ZNF143P52747 638 aaPredicted RBP12.94□□□□□ -0.34
CHD7-211ENST00000532149 BCAT1P54687 386 aa12.94□□□□□ -0.34
CHD7-211ENST00000532149 KLF1Q13351 362 aaPredicted RBP12.94□□□□□ -0.34
CHD7-211ENST00000532149 PDCLQ13371 301 aa12.94□□□□□ -0.34
CHD7-211ENST00000532149 PPP1R7Q15435 360 aa12.94□□□□□ -0.34
CHD7-211ENST00000532149 ZNF394Q53GI3 561 aa12.94□□□□□ -0.34
CHD7-211ENST00000532149 FAM26DQ5JW98 314 aa12.94□□□□□ -0.34
CHD7-211ENST00000532149 EMC10Q5UCC4 262 aa12.94□□□□□ -0.34
CHD7-211ENST00000532149 TWF2Q6IBS0 349 aaKnown RBP12.94□□□□□ -0.34
CHD7-211ENST00000532149 SCARA5Q6ZMJ2 495 aa12.94□□□□□ -0.34
CHD7-211ENST00000532149 MRPL10Q7Z7H8 261 aaKnown RBP12.94□□□□□ -0.34
CHD7-211ENST00000532149 PCGF5Q86SE9 256 aa12.94□□□□□ -0.34
CHD7-211ENST00000532149 CDR2LQ86X02 465 aaPredicted RBP12.94□□□□□ -0.34
CHD7-211ENST00000532149 XYLT1Q86Y38 959 aa12.94□□□□□ -0.34
CHD7-211ENST00000532149 CCDC50Q8IVM0 306 aa12.94□□□□□ -0.34
CHD7-211ENST00000532149 ANKRD52Q8NB46 1076 aa12.94□□□□□ -0.34
CHD7-211ENST00000532149 ZNF668Q96K58 619 aaPredicted RBP12.94□□□□□ -0.34
CHD7-211ENST00000532149 UROC1Q96N76 676 aa12.94□□□□□ -0.34
CHD7-211ENST00000532149 MCEEQ96PE7 176 aa12.94□□□□□ -0.34
CHD7-211ENST00000532149 PHACTR1Q9C0D0 580 aa12.94□□□□□ -0.34
CHD7-211ENST00000532149 ELOVL4Q9GZR5 314 aa12.94□□□□□ -0.34
CHD7-211ENST00000532149 CRISPLD2Q9H0B8 497 aa12.94□□□□□ -0.34
CHD7-211ENST00000532149 SNX25Q9H3E2 840 aa12.94□□□□□ -0.34
CHD7-211ENST00000532149 SMYD3Q9H7B4 428 aa12.94□□□□□ -0.34
CHD7-211ENST00000532149 XPNPEP3Q9NQH7 507 aa12.94□□□□□ -0.34
CHD7-211ENST00000532149 GINS2Q9Y248 185 aa12.94□□□□□ -0.34
CHD7-211ENST00000532149 SNX9Q9Y5X1 595 aa12.94□□□□□ -0.34
CHD7-211ENST00000532149 DPYSL4O14531 572 aa12.93□□□□□ -0.34
CHD7-211ENST00000532149 ADAMTS4O75173 837 aa12.93□□□□□ -0.34
CHD7-211ENST00000532149 PPFIA2O75334 1257 aa12.93□□□□□ -0.34
CHD7-211ENST00000532149 CSDE1O75534 798 aaKnown RBP12.93□□□□□ -0.34
CHD7-211ENST00000532149 ZMYND10O75800 440 aa12.93□□□□□ -0.34
CHD7-211ENST00000532149 MYBL2P10244 700 aa12.93□□□□□ -0.34
CHD7-211ENST00000532149 RARAP10276 462 aa12.93□□□□□ -0.34
CHD7-211ENST00000532149 PSMA2P25787 234 aa12.93□□□□□ -0.34
CHD7-211ENST00000532149 MAP2K2P36507 400 aa12.93□□□□□ -0.34
CHD7-211ENST00000532149 BST2Q10589 180 aaKnown RBP12.93□□□□□ -0.34
CHD7-211ENST00000532149 ZNF211Q13398 564 aaPredicted RBP12.93□□□□□ -0.34
CHD7-211ENST00000532149 PTK6Q13882 451 aa12.93□□□□□ -0.34
CHD7-211ENST00000532149 TFDP2Q14188 446 aa12.93□□□□□ -0.34
CHD7-211ENST00000532149 PDK2Q15119 407 aa12.93□□□□□ -0.34
CHD7-211ENST00000532149 NBPF20Q3BBV1 942 aa12.93□□□□□ -0.34
CHD7-211ENST00000532149 DENND1BQ6P3S1 775 aa12.93□□□□□ -0.34
CHD7-211ENST00000532149 C4orf22Q6V702 233 aa12.93□□□□□ -0.34
CHD7-211ENST00000532149 ZNF365Q70YC5 407 aa12.93□□□□□ -0.34
CHD7-211ENST00000532149 TRMT10CQ7L0Y3 403 aaKnown RBP12.93□□□□□ -0.34
CHD7-211ENST00000532149 PSTKQ8IV42 348 aaKnown RBP12.93□□□□□ -0.34
CHD7-211ENST00000532149 TEKT4Q8WW24 435 aa12.93□□□□□ -0.34
CHD7-211ENST00000532149 ZBTB10Q96DT7 871 aa12.93□□□□□ -0.34
CHD7-211ENST00000532149 SLC4A5Q9BY07 1137 aa12.93□□□□□ -0.34
CHD7-211ENST00000532149 EIF2AQ9BY44 585 aaKnown RBP12.93□□□□□ -0.34
CHD7-211ENST00000532149 SENP6Q9GZR1 1112 aaPredicted RBP12.93□□□□□ -0.34
CHD7-211ENST00000532149 RSAD1Q9HA92 442 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms