RNA–Protein interactions for RNA: ENST00000532024.1

PPFIA1-220, Transcript of PTPRF interacting protein alpha 1, humanhuman

TSL 3

Gene PPFIA1, Length 563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-220ENST00000532024 SMARCD1Q96GM5 515 aa12.58□□□□□ -0.4
PPFIA1-220ENST00000532024 PCED1BQ96HM7 432 aa12.58□□□□□ -0.4
PPFIA1-220ENST00000532024 CEP295NLQ96MC4 621 aa12.58□□□□□ -0.4
PPFIA1-220ENST00000532024 SPAG5Q96R06 1193 aa12.58□□□□□ -0.4
PPFIA1-220ENST00000532024 PKMYT1Q99640 499 aa12.58□□□□□ -0.4
PPFIA1-220ENST00000532024 RHOBTB2Q9BYZ6 727 aa12.58□□□□□ -0.4
PPFIA1-220ENST00000532024 DPEP3Q9H4B8 488 aa12.58□□□□□ -0.4
PPFIA1-220ENST00000532024 EHD2Q9NZN4 543 aa12.58□□□□□ -0.4
PPFIA1-220ENST00000532024 THEGQ9P2T0 379 aa12.58□□□□□ -0.4
PPFIA1-220ENST00000532024 HMGXB4Q9UGU5 601 aa12.58□□□□□ -0.4
PPFIA1-220ENST00000532024 SIK3Q9Y2K2 1263 aa12.58□□□□□ -0.4
PPFIA1-220ENST00000532024 ASB3Q9Y575 518 aa12.58□□□□□ -0.4
PPFIA1-220ENST00000532024 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.57□□□□□ -0.4
PPFIA1-220ENST00000532024 CCDC195A0A1B0GUA6 201 aa12.57□□□□□ -0.4
PPFIA1-220ENST00000532024 TRIM66O15016 1216 aa12.57□□□□□ -0.4
PPFIA1-220ENST00000532024 HCRTO43612 131 aa12.57□□□□□ -0.4
PPFIA1-220ENST00000532024 FAM200BP0CF97 657 aa12.57□□□□□ -0.4
PPFIA1-220ENST00000532024 HAPLN1P10915 354 aaPredicted RBP12.57□□□□□ -0.4
PPFIA1-220ENST00000532024 VDRP11473 427 aa12.57□□□□□ -0.4
PPFIA1-220ENST00000532024 MTHFRP42898 656 aa12.57□□□□□ -0.4
PPFIA1-220ENST00000532024 RAD23BP54727 409 aa12.57□□□□□ -0.4
PPFIA1-220ENST00000532024 BPIFB4P59827 614 aa12.57□□□□□ -0.4
PPFIA1-220ENST00000532024 RBM10P98175 930 aaKnown RBP12.57□□□□□ -0.4
PPFIA1-220ENST00000532024 KCNMA1Q12791 1236 aa12.57□□□□□ -0.4
PPFIA1-220ENST00000532024 ORC1Q13415 861 aa12.57□□□□□ -0.4
PPFIA1-220ENST00000532024 SMAD4Q13485 552 aaKnown RBP12.57□□□□□ -0.4
PPFIA1-220ENST00000532024 TMC5Q6UXY8 1006 aa12.57□□□□□ -0.4
PPFIA1-220ENST00000532024 FAM35AQ86V20 835 aa12.57□□□□□ -0.4
PPFIA1-220ENST00000532024 LRRTM3Q86VH5 581 aa12.57□□□□□ -0.4
PPFIA1-220ENST00000532024 SCN4BQ8IWT1 228 aa12.57□□□□□ -0.4
PPFIA1-220ENST00000532024 UBR7Q8N806 425 aa12.57□□□□□ -0.4
PPFIA1-220ENST00000532024 SLC4A11Q8NBS3 891 aa12.57□□□□□ -0.4
PPFIA1-220ENST00000532024 SHC3Q92529 594 aa12.57□□□□□ -0.4
PPFIA1-220ENST00000532024 SMG7Q92540 1137 aaKnown RBP12.57□□□□□ -0.4
PPFIA1-220ENST00000532024 KAT5Q92993 513 aa12.57□□□□□ -0.4
PPFIA1-220ENST00000532024 CYFIP2Q96F07 1278 aa12.57□□□□□ -0.4
PPFIA1-220ENST00000532024 MSLNLQ96KJ4 702 aa12.57□□□□□ -0.4
PPFIA1-220ENST00000532024 ZNF512Q96ME7 567 aaPredicted RBP12.57□□□□□ -0.4
PPFIA1-220ENST00000532024 KREMEN1Q96MU8 473 aa12.57□□□□□ -0.4
PPFIA1-220ENST00000532024 NECTIN4Q96NY8 510 aa12.57□□□□□ -0.4
PPFIA1-220ENST00000532024 STK33Q9BYT3 514 aa12.57□□□□□ -0.4
PPFIA1-220ENST00000532024 PRKD2Q9BZL6 878 aa12.57□□□□□ -0.4
PPFIA1-220ENST00000532024 ADAM7Q9H2U9 754 aa12.57□□□□□ -0.4
PPFIA1-220ENST00000532024 SIX2Q9NPC8 291 aa12.57□□□□□ -0.4
PPFIA1-220ENST00000532024 DMAP1Q9NPF5 467 aaPredicted RBP12.57□□□□□ -0.4
PPFIA1-220ENST00000532024 FAM49BQ9NUQ9 324 aa12.57□□□□□ -0.4
PPFIA1-220ENST00000532024 IFNKQ9P0W0 207 aa12.57□□□□□ -0.4
PPFIA1-220ENST00000532024 CLEC1BQ9P126 229 aa12.57□□□□□ -0.4
PPFIA1-220ENST00000532024 HESX1Q9UBX0 185 aa12.57□□□□□ -0.4
PPFIA1-220ENST00000532024 H3BQ06 376 aaPredicted RBP12.56□□□□□ -0.4
PPFIA1-220ENST00000532024 MED7O43513 233 aa12.56□□□□□ -0.4
PPFIA1-220ENST00000532024 RFPL2O75678 378 aa12.56□□□□□ -0.4
PPFIA1-220ENST00000532024 SEC24AO95486 1093 aa12.56□□□□□ -0.4
PPFIA1-220ENST00000532024 FGF19O95750 216 aa12.56□□□□□ -0.4
PPFIA1-220ENST00000532024 CCDC172P0C7W6 258 aa12.56□□□□□ -0.4
PPFIA1-220ENST00000532024 CCDC130P13994 396 aa12.56□□□□□ -0.4
PPFIA1-220ENST00000532024 ACO1P21399 889 aaKnown RBP12.56□□□□□ -0.4
PPFIA1-220ENST00000532024 BDNFP23560 247 aa12.56□□□□□ -0.4
PPFIA1-220ENST00000532024 CYP2F1P24903 491 aa12.56□□□□□ -0.4
PPFIA1-220ENST00000532024 LTBRP36941 435 aa12.56□□□□□ -0.4
PPFIA1-220ENST00000532024 GRIK1P39086 918 aa12.56□□□□□ -0.4
PPFIA1-220ENST00000532024 POLR2FP61218 127 aaKnown RBP12.56□□□□□ -0.4
PPFIA1-220ENST00000532024 PTK2Q05397 1052 aa12.56□□□□□ -0.4
PPFIA1-220ENST00000532024 TWF1Q12792 350 aa12.56□□□□□ -0.4
PPFIA1-220ENST00000532024 NR1I3Q14994 352 aa12.56□□□□□ -0.4
PPFIA1-220ENST00000532024 CLUL1Q15846 466 aa12.56□□□□□ -0.4
PPFIA1-220ENST00000532024 LEXMQ3ZCV2 418 aa12.56□□□□□ -0.4
PPFIA1-220ENST00000532024 ATAT1Q5SQI0 421 aa12.56□□□□□ -0.4
PPFIA1-220ENST00000532024 GJB7Q6PEY0 223 aa12.56□□□□□ -0.4
PPFIA1-220ENST00000532024 GPR149Q86SP6 731 aa12.56□□□□□ -0.4
PPFIA1-220ENST00000532024 LEMD2Q8NC56 503 aa12.56□□□□□ -0.4
PPFIA1-220ENST00000532024 SMRP1Q8NCR6 262 aa12.56□□□□□ -0.4
PPFIA1-220ENST00000532024 SLC2A14Q8TDB8 520 aa12.56□□□□□ -0.4
PPFIA1-220ENST00000532024 WHAMMQ8TF30 809 aa12.56□□□□□ -0.4
PPFIA1-220ENST00000532024 NAP1L5Q96NT1 182 aaPredicted RBP12.56□□□□□ -0.4
PPFIA1-220ENST00000532024 TWNKQ96RR1 684 aa12.56□□□□□ -0.4
PPFIA1-220ENST00000532024 HNRNPABQ99729 332 aaKnown RBP12.56□□□□□ -0.4
PPFIA1-220ENST00000532024 NUP58Q9BVL2 599 aa12.56□□□□□ -0.4
PPFIA1-220ENST00000532024 B3GNT5Q9BYG0 378 aa12.56□□□□□ -0.4
PPFIA1-220ENST00000532024 KRT82Q9NSB4 513 aa12.56□□□□□ -0.4
PPFIA1-220ENST00000532024 TMLHEQ9NVH6 421 aa12.56□□□□□ -0.4
PPFIA1-220ENST00000532024 CEP72Q9P209 647 aa12.56□□□□□ -0.4
PPFIA1-220ENST00000532024 CNTN6Q9UQ52 1028 aa12.56□□□□□ -0.4
PPFIA1-220ENST00000532024 SLC27A5Q9Y2P5 690 aa12.56□□□□□ -0.4
PPFIA1-220ENST00000532024 NME7Q9Y5B8 376 aa12.56□□□□□ -0.4
PPFIA1-220ENST00000532024 FHOD1Q9Y613 1164 aa12.56□□□□□ -0.4
PPFIA1-220ENST00000532024 BRWD1Q9NSI6 2320 aa12.56□□□□□ -0.4
PPFIA1-220ENST00000532024 MTCL1Q9Y4B5 1905 aaKnown RBP12.56□□□□□ -0.4
PPFIA1-220ENST00000532024 F8VZ95 297 aa12.55□□□□□ -0.4
PPFIA1-220ENST00000532024 CCL16O15467 120 aa12.55□□□□□ -0.4
PPFIA1-220ENST00000532024 TEX33O43247 280 aa12.55□□□□□ -0.4
PPFIA1-220ENST00000532024 AP1G2O75843 785 aa12.55□□□□□ -0.4
PPFIA1-220ENST00000532024 TPM1P09493 284 aa12.55□□□□□ -0.4
PPFIA1-220ENST00000532024 CSH1P0DML2 217 aa12.55□□□□□ -0.4
PPFIA1-220ENST00000532024 CSH2P0DML3 217 aa12.55□□□□□ -0.4
PPFIA1-220ENST00000532024 PTPN2P17706 415 aa12.55□□□□□ -0.4
PPFIA1-220ENST00000532024 ADORA2BP29275 332 aa12.55□□□□□ -0.4
PPFIA1-220ENST00000532024 GNA15P30679 374 aa12.55□□□□□ -0.4
PPFIA1-220ENST00000532024 ZNF132P52740 706 aa12.55□□□□□ -0.4
PPFIA1-220ENST00000532024 APBA1Q02410 837 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms