RNA–Protein interactions for RNA: ENST00000531867.1

PUM1-222, Transcript of pumilio RNA binding family member 1, human

TSL 4

Gene PUM1, Length 549 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PUM1-222	ENST00000531867	HOXC8	P31273	242 aa		6.57	□□□□□ -1.36
PUM1-222	ENST00000531867	NDUFV1	P49821	464 aa		6.57	□□□□□ -1.36
PUM1-222	ENST00000531867	SLURP1	P55000	103 aa		6.57	□□□□□ -1.36
PUM1-222	ENST00000531867	NFKB2	Q00653	900 aa		6.57	□□□□□ -1.36
PUM1-222	ENST00000531867	BAAT	Q14032	418 aa	Predicted RBP	6.57	□□□□□ -1.36
PUM1-222	ENST00000531867	SYCP2L	Q5T4T6	812 aa		6.57	□□□□□ -1.36
PUM1-222	ENST00000531867	ERICH6B	Q5W0A0	696 aa		6.57	□□□□□ -1.36
PUM1-222	ENST00000531867	SLFN13	Q68D06	897 aa		6.57	□□□□□ -1.36
PUM1-222	ENST00000531867	CD300LD	Q6UXZ3	194 aa		6.57	□□□□□ -1.36
PUM1-222	ENST00000531867	AMOTL1	Q8IY63	956 aa		6.57	□□□□□ -1.36
PUM1-222	ENST00000531867	PUM2	Q8TB72	1066 aa	Known RBP eCLIP	6.57	□□□□□ -1.36
PUM1-222	ENST00000531867	ATP8B4	Q8TF62	1192 aa		6.57	□□□□□ -1.36
PUM1-222	ENST00000531867	NINJ1	Q92982	152 aa		6.57	□□□□□ -1.36
PUM1-222	ENST00000531867	P2RX5	Q93086	422 aa		6.57	□□□□□ -1.36
PUM1-222	ENST00000531867	ZNF689	Q96CS4	500 aa	Predicted RBP	6.57	□□□□□ -1.36
PUM1-222	ENST00000531867	CEP95	Q96GE4	821 aa		6.57	□□□□□ -1.36
PUM1-222	ENST00000531867	IPO9	Q96P70	1041 aa	Known RBP	6.57	□□□□□ -1.36
PUM1-222	ENST00000531867	XYLT2	Q9H1B5	865 aa		6.57	□□□□□ -1.36
PUM1-222	ENST00000531867	SEMA4A	Q9H3S1	761 aa		6.57	□□□□□ -1.36
PUM1-222	ENST00000531867	INCENP	Q9NQS7	918 aa		6.57	□□□□□ -1.36
PUM1-222	ENST00000531867	ARPP21	Q9UBL0	812 aa	Predicted RBP	6.57	□□□□□ -1.36
PUM1-222	ENST00000531867	NUB1	Q9Y5A7	615 aa		6.57	□□□□□ -1.36
PUM1-222	ENST00000531867	EP300	Q09472	2414 aa	Predicted RBP	6.57	□□□□□ -1.36
PUM1-222	ENST00000531867	BAHCC1	Q9P281	2608 aa		6.57	□□□□□ -1.36
PUM1-222	ENST00000531867	ZNF292	O60281	2723 aa		6.56	□□□□□ -1.36
PUM1-222	ENST00000531867	TTC3	P53804	2025 aa		6.56	□□□□□ -1.36
PUM1-222	ENST00000531867	FANCM	Q8IYD8	2048 aa		6.56	□□□□□ -1.36
PUM1-222	ENST00000531867	KIAA1671	Q9BY89	1806 aa		6.56	□□□□□ -1.36
PUM1-222	ENST00000531867	RSPH10B2	B2RC85	870 aa		6.56	□□□□□ -1.36
PUM1-222	ENST00000531867	TADA3	O75528	432 aa		6.56	□□□□□ -1.36
PUM1-222	ENST00000531867	F2	P00734	622 aa		6.56	□□□□□ -1.36
PUM1-222	ENST00000531867	RSPH10B	P0C881	870 aa		6.56	□□□□□ -1.36
PUM1-222	ENST00000531867	CAST	P20810	708 aa	Known RBP	6.56	□□□□□ -1.36
PUM1-222	ENST00000531867	DNAJB1	P25685	340 aa		6.56	□□□□□ -1.36
PUM1-222	ENST00000531867	CTNNB1	P35222	781 aa		6.56	□□□□□ -1.36
PUM1-222	ENST00000531867	CLCN5	P51795	746 aa		6.56	□□□□□ -1.36
PUM1-222	ENST00000531867	GPR85	P60893	370 aa		6.56	□□□□□ -1.36
PUM1-222	ENST00000531867	ARHGAP1	Q07960	439 aa		6.56	□□□□□ -1.36
PUM1-222	ENST00000531867	FOXD4	Q12950	439 aa	Predicted RBP	6.56	□□□□□ -1.36
PUM1-222	ENST00000531867	UBE3C	Q15386	1083 aa		6.56	□□□□□ -1.36
PUM1-222	ENST00000531867	LCE4A	Q5TA78	99 aa		6.56	□□□□□ -1.36
PUM1-222	ENST00000531867	TMEM184A	Q6ZMB5	413 aa		6.56	□□□□□ -1.36
PUM1-222	ENST00000531867	ADGRD2	Q7Z7M1	963 aa		6.56	□□□□□ -1.36
PUM1-222	ENST00000531867	SERINC5	Q86VE9	423 aa		6.56	□□□□□ -1.36
PUM1-222	ENST00000531867	TRIM48	Q8IWZ4	208 aa		6.56	□□□□□ -1.36
PUM1-222	ENST00000531867	UBALD2	Q8IYN6	164 aa		6.56	□□□□□ -1.36
PUM1-222	ENST00000531867	IFNL3	Q8IZI9	196 aa		6.56	□□□□□ -1.36
PUM1-222	ENST00000531867	MYO1H	Q8N1T3	1032 aa		6.56	□□□□□ -1.36
PUM1-222	ENST00000531867	C7orf31	Q8N865	590 aa		6.56	□□□□□ -1.36
PUM1-222	ENST00000531867	GPATCH11	Q8N954	259 aa		6.56	□□□□□ -1.36
PUM1-222	ENST00000531867	KY	Q8NBH2	561 aa		6.56	□□□□□ -1.36
PUM1-222	ENST00000531867	DNER	Q8NFT8	737 aa		6.56	□□□□□ -1.36
PUM1-222	ENST00000531867	AFG1L	Q8WV93	481 aa		6.56	□□□□□ -1.36
PUM1-222	ENST00000531867	CLEC4D	Q8WXI8	215 aa		6.56	□□□□□ -1.36
PUM1-222	ENST00000531867	SEPT8	Q92599	483 aa		6.56	□□□□□ -1.36
PUM1-222	ENST00000531867	RPGRIP1	Q96KN7	1286 aa		6.56	□□□□□ -1.36
PUM1-222	ENST00000531867	NOX5	Q96PH1	765 aa		6.56	□□□□□ -1.36
PUM1-222	ENST00000531867	CDC6	Q99741	560 aa		6.56	□□□□□ -1.36
PUM1-222	ENST00000531867	GORASP1	Q9BQQ3	440 aa		6.56	□□□□□ -1.36
PUM1-222	ENST00000531867	S1PR5	Q9H228	398 aa		6.56	□□□□□ -1.36
PUM1-222	ENST00000531867	SMOC1	Q9H4F8	434 aa		6.56	□□□□□ -1.36
PUM1-222	ENST00000531867	DTL	Q9NZJ0	730 aa		6.56	□□□□□ -1.36
PUM1-222	ENST00000531867	MYOT	Q9UBF9	498 aa		6.56	□□□□□ -1.36
PUM1-222	ENST00000531867	ACACB	O00763	2458 aa		6.56	□□□□□ -1.36
PUM1-222	ENST00000531867	VPS13A	Q96RL7	3174 aa		6.55	□□□□□ -1.36
PUM1-222	ENST00000531867	ADGRA3	Q8IWK6	1321 aa		6.55	□□□□□ -1.36
PUM1-222	ENST00000531867	MYH7B	A7E2Y1	1941 aa		6.55	□□□□□ -1.36
PUM1-222	ENST00000531867	TCRBV5S2	A0A599	114 aa		6.55	□□□□□ -1.36
PUM1-222	ENST00000531867	GOLIM4	O00461	696 aa		6.55	□□□□□ -1.36
PUM1-222	ENST00000531867	BCAR3	O75815	825 aa		6.55	□□□□□ -1.36
PUM1-222	ENST00000531867	GH1	P01241	217 aa		6.55	□□□□□ -1.36
PUM1-222	ENST00000531867	TRIM27	P14373	513 aa		6.55	□□□□□ -1.36
PUM1-222	ENST00000531867	GRK2	P25098	689 aa		6.55	□□□□□ -1.36
PUM1-222	ENST00000531867	GRK3	P35626	688 aa		6.55	□□□□□ -1.36
PUM1-222	ENST00000531867	RARS	P54136	660 aa	Known RBP	6.55	□□□□□ -1.36
PUM1-222	ENST00000531867	SUMO1	P63165	101 aa	Known RBP	6.55	□□□□□ -1.36
PUM1-222	ENST00000531867	KCNC3	Q14003	757 aa		6.55	□□□□□ -1.36
PUM1-222	ENST00000531867	NTRK3	Q16288	839 aa		6.55	□□□□□ -1.36
PUM1-222	ENST00000531867	DGKD	Q16760	1214 aa		6.55	□□□□□ -1.36
PUM1-222	ENST00000531867	LONRF2	Q1L5Z9	754 aa		6.55	□□□□□ -1.36
PUM1-222	ENST00000531867	ZC3H12B	Q5HYM0	836 aa	Known RBP	6.55	□□□□□ -1.36
PUM1-222	ENST00000531867	SPATC1	Q76KD6	591 aa		6.55	□□□□□ -1.36
PUM1-222	ENST00000531867	MAMDC2	Q7Z304	686 aa	Predicted RBP	6.55	□□□□□ -1.36
PUM1-222	ENST00000531867	AACS	Q86V21	672 aa		6.55	□□□□□ -1.36
PUM1-222	ENST00000531867	SCUBE1	Q8IWY4	988 aa		6.55	□□□□□ -1.36
PUM1-222	ENST00000531867	CARF	Q8N187	725 aa		6.55	□□□□□ -1.36
PUM1-222	ENST00000531867	ATL2	Q8NHH9	583 aa		6.55	□□□□□ -1.36
PUM1-222	ENST00000531867	FEZF2	Q8TBJ5	459 aa		6.55	□□□□□ -1.36
PUM1-222	ENST00000531867	SPPL3	Q8TCT6	385 aa		6.55	□□□□□ -1.36
PUM1-222	ENST00000531867	APBB2	Q92870	758 aa		6.55	□□□□□ -1.36
PUM1-222	ENST00000531867	PPP2R3C	Q969Q6	453 aa		6.55	□□□□□ -1.36
PUM1-222	ENST00000531867	TOE1	Q96GM8	510 aa	Known RBP	6.55	□□□□□ -1.36
PUM1-222	ENST00000531867	ALG1	Q9BT22	464 aa		6.55	□□□□□ -1.36
PUM1-222	ENST00000531867	KATNAL1	Q9BW62	490 aa		6.55	□□□□□ -1.36
PUM1-222	ENST00000531867	IFIH1	Q9BYX4	1025 aa	Known RBP	6.55	□□□□□ -1.36
PUM1-222	ENST00000531867	RANBP17	Q9H2T7	1088 aa	Known RBP	6.55	□□□□□ -1.36
PUM1-222	ENST00000531867	CDIP1	Q9H305	208 aa		6.55	□□□□□ -1.36
PUM1-222	ENST00000531867	SLC6A20	Q9NP91	592 aa		6.55	□□□□□ -1.36
PUM1-222	ENST00000531867	PFDN2	Q9UHV9	154 aa		6.55	□□□□□ -1.36
PUM1-222	ENST00000531867	CCPG1	Q9ULG6	757 aa		6.55	□□□□□ -1.36

Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms