RNA–Protein interactions for RNA: ENST00000531657.1

PPFIA1-219, Transcript of PTPRF interacting protein alpha 1, humanhuman

TSL 2

Gene PPFIA1, Length 3,036 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-219ENST00000531657 CA9Q16790 459 aa10.05□□□□□ -0.8
PPFIA1-219ENST00000531657 XRRA1Q6P2D8 792 aa10.05□□□□□ -0.8
PPFIA1-219ENST00000531657 FOXR2Q6PJQ5 311 aa10.05□□□□□ -0.8
PPFIA1-219ENST00000531657 CCDC121Q6ZUS5 278 aa10.05□□□□□ -0.8
PPFIA1-219ENST00000531657 FASTKD5Q7L8L6 764 aaKnown RBP10.05□□□□□ -0.8
PPFIA1-219ENST00000531657 CEP57Q86XR8 500 aa10.05□□□□□ -0.8
PPFIA1-219ENST00000531657 UNC45BQ8IWX7 931 aa10.05□□□□□ -0.8
PPFIA1-219ENST00000531657 RDM1Q8NG50 284 aa10.05□□□□□ -0.8
PPFIA1-219ENST00000531657 TCP11Q8WWU5 503 aa10.05□□□□□ -0.8
PPFIA1-219ENST00000531657 TBC1D31Q96DN5 1066 aa10.05□□□□□ -0.8
PPFIA1-219ENST00000531657 SNF8Q96H20 258 aa10.05□□□□□ -0.8
PPFIA1-219ENST00000531657 APOL2Q9BQE5 337 aa10.05□□□□□ -0.8
PPFIA1-219ENST00000531657 UNKQ9C0B0 810 aaKnown RBP10.05□□□□□ -0.8
PPFIA1-219ENST00000531657 VPS33BQ9H267 617 aa10.05□□□□□ -0.8
PPFIA1-219ENST00000531657 PDZD7Q9H5P4 517 aa10.05□□□□□ -0.8
PPFIA1-219ENST00000531657 MAP3K20Q9NYL2 800 aaKnown RBP10.05□□□□□ -0.8
PPFIA1-219ENST00000531657 SLC17A6Q9P2U8 582 aa10.05□□□□□ -0.8
PPFIA1-219ENST00000531657 DCTN4Q9UJW0 460 aa10.05□□□□□ -0.8
PPFIA1-219ENST00000531657 CITO14578 2027 aa10.05□□□□□ -0.8
PPFIA1-219ENST00000531657 HMGB1P1B2RPK0 211 aaPredicted RBP10.04□□□□□ -0.8
PPFIA1-219ENST00000531657 H0YGN5 161 aa10.04□□□□□ -0.8
PPFIA1-219ENST00000531657 RECQL4O94761 1208 aa10.04□□□□□ -0.8
PPFIA1-219ENST00000531657 C22orf31O95567 290 aa10.04□□□□□ -0.8
PPFIA1-219ENST00000531657 SNAI1O95863 264 aaPredicted RBP10.04□□□□□ -0.8
PPFIA1-219ENST00000531657 APRTP07741 180 aa10.04□□□□□ -0.8
PPFIA1-219ENST00000531657 RBP3P10745 1247 aa10.04□□□□□ -0.8
PPFIA1-219ENST00000531657 RFX1P22670 979 aa10.04□□□□□ -0.8
PPFIA1-219ENST00000531657 STX2P32856 288 aa10.04□□□□□ -0.8
PPFIA1-219ENST00000531657 PGGT1BP53609 377 aa10.04□□□□□ -0.8
PPFIA1-219ENST00000531657 ARPP19P56211 112 aa10.04□□□□□ -0.8
PPFIA1-219ENST00000531657 PITX1P78337 314 aaPredicted RBP10.04□□□□□ -0.8
PPFIA1-219ENST00000531657 CENPCQ03188 943 aa10.04□□□□□ -0.8
PPFIA1-219ENST00000531657 ITIH3Q06033 890 aa10.04□□□□□ -0.8
PPFIA1-219ENST00000531657 MTMR3Q13615 1198 aa10.04□□□□□ -0.8
PPFIA1-219ENST00000531657 E2F5Q15329 346 aa10.04□□□□□ -0.8
PPFIA1-219ENST00000531657 SPOCD1Q6ZMY3 1216 aa10.04□□□□□ -0.8
PPFIA1-219ENST00000531657 CCDC110Q8TBZ0 833 aa10.04□□□□□ -0.8
PPFIA1-219ENST00000531657 OSBPL7Q9BZF2 842 aa10.04□□□□□ -0.8
PPFIA1-219ENST00000531657 ABT1Q9ULW3 272 aaKnown RBP10.04□□□□□ -0.8
PPFIA1-219ENST00000531657 NFS1Q9Y697 457 aa10.04□□□□□ -0.8
PPFIA1-219ENST00000531657 GMNCA6NCL1 334 aa10.04□□□□□ -0.8
PPFIA1-219ENST00000531657 KCNN4O15554 427 aa10.04□□□□□ -0.8
PPFIA1-219ENST00000531657 USP12O75317 370 aa10.04□□□□□ -0.8
PPFIA1-219ENST00000531657 LRCH4O75427 683 aa10.04□□□□□ -0.8
PPFIA1-219ENST00000531657 POMCP01189 267 aa10.04□□□□□ -0.8
PPFIA1-219ENST00000531657 MMP8P22894 467 aa10.04□□□□□ -0.8
PPFIA1-219ENST00000531657 TBXAS1P24557 533 aaPredicted RBP10.04□□□□□ -0.8
PPFIA1-219ENST00000531657 NDUFV1P49821 464 aa10.04□□□□□ -0.8
PPFIA1-219ENST00000531657 RAD23BP54727 409 aa10.04□□□□□ -0.8
PPFIA1-219ENST00000531657 EIF3EP60228 445 aaKnown RBP10.04□□□□□ -0.8
PPFIA1-219ENST00000531657 DNAJC3Q13217 504 aa10.04□□□□□ -0.8
PPFIA1-219ENST00000531657 ACVR2BQ13705 512 aa10.04□□□□□ -0.8
PPFIA1-219ENST00000531657 DHX34Q14147 1143 aaKnown RBP10.04□□□□□ -0.8
PPFIA1-219ENST00000531657 SIX1Q15475 284 aaPredicted RBP10.04□□□□□ -0.8
PPFIA1-219ENST00000531657 GNASQ5JWF2 1037 aa10.04□□□□□ -0.8
PPFIA1-219ENST00000531657 PMF1Q6P1K2 205 aa10.04□□□□□ -0.8
PPFIA1-219ENST00000531657 MICALCLQ6ZW33 695 aa10.04□□□□□ -0.8
PPFIA1-219ENST00000531657 ILDR2Q71H61 639 aa10.04□□□□□ -0.8
PPFIA1-219ENST00000531657 HOOK3Q86VS8 718 aa10.04□□□□□ -0.8
PPFIA1-219ENST00000531657 WDR49Q8IV35 697 aa10.04□□□□□ -0.8
PPFIA1-219ENST00000531657 SLC17A8Q8NDX2 589 aa10.04□□□□□ -0.8
PPFIA1-219ENST00000531657 ATL2Q8NHH9 583 aa10.04□□□□□ -0.8
PPFIA1-219ENST00000531657 EDEM1Q92611 657 aa10.04□□□□□ -0.8
PPFIA1-219ENST00000531657 CD101Q93033 1021 aa10.04□□□□□ -0.8
PPFIA1-219ENST00000531657 SH3GL2Q99962 352 aa10.04□□□□□ -0.8
PPFIA1-219ENST00000531657 TIPINQ9BVW5 301 aa10.04□□□□□ -0.8
PPFIA1-219ENST00000531657 ST6GALNAC4Q9H4F1 302 aa10.04□□□□□ -0.8
PPFIA1-219ENST00000531657 GBA2Q9HCG7 927 aaPredicted RBP10.04□□□□□ -0.8
PPFIA1-219ENST00000531657 SLCO1B3Q9NPD5 702 aa10.04□□□□□ -0.8
PPFIA1-219ENST00000531657 NINJ2Q9NZG7 142 aa10.04□□□□□ -0.8
PPFIA1-219ENST00000531657 FOCADQ5VW36 1801 aa10.04□□□□□ -0.8
PPFIA1-219ENST00000531657 A0A1W2PPM1 405 aa10.04□□□□□ -0.8
PPFIA1-219ENST00000531657 BTNL10A8MVZ5 291 aa10.04□□□□□ -0.8
PPFIA1-219ENST00000531657 MEFVO15553 781 aaPredicted RBP10.04□□□□□ -0.8
PPFIA1-219ENST00000531657 PRPSAP2O60256 369 aa10.04□□□□□ -0.8
PPFIA1-219ENST00000531657 CTCFP49711 727 aaPredicted RBP10.04□□□□□ -0.8
PPFIA1-219ENST00000531657 CCNA1P78396 465 aa10.04□□□□□ -0.8
PPFIA1-219ENST00000531657 SPARCL1Q14515 664 aa10.04□□□□□ -0.8
PPFIA1-219ENST00000531657 NFIL3Q16649 462 aa10.04□□□□□ -0.8
PPFIA1-219ENST00000531657 FAM183BPQ6ZVS7 135 aa10.04□□□□□ -0.8
PPFIA1-219ENST00000531657 PALM2Q8IXS6 379 aa10.04□□□□□ -0.8
PPFIA1-219ENST00000531657 SLC4A11Q8NBS3 891 aa10.04□□□□□ -0.8
PPFIA1-219ENST00000531657 FAM167AQ96KS9 214 aa10.04□□□□□ -0.8
PPFIA1-219ENST00000531657 RPS6KC1Q96S38 1066 aa10.04□□□□□ -0.8
PPFIA1-219ENST00000531657 NIFKQ9BYG3 293 aaKnown RBP10.04□□□□□ -0.8
PPFIA1-219ENST00000531657 SLC13A1Q9BZW2 595 aa10.04□□□□□ -0.8
PPFIA1-219ENST00000531657 ARHGAP39Q9C0H5 1083 aa10.04□□□□□ -0.8
PPFIA1-219ENST00000531657 XYLT2Q9H1B5 865 aa10.04□□□□□ -0.8
PPFIA1-219ENST00000531657 EPB41L4BQ9H329 900 aa10.04□□□□□ -0.8
PPFIA1-219ENST00000531657 UBP1Q9NZI7 540 aa10.04□□□□□ -0.8
PPFIA1-219ENST00000531657 IP6K2Q9UHH9 426 aa10.04□□□□□ -0.8
PPFIA1-219ENST00000531657 TRIM33Q9UPN9 1127 aa10.04□□□□□ -0.8
PPFIA1-219ENST00000531657 SNX10Q9Y5X0 201 aa10.04□□□□□ -0.8
PPFIA1-219ENST00000531657 C2orf71A6NGG8 1288 aa10.03□□□□□ -0.8
PPFIA1-219ENST00000531657 F8W810 466 aa10.03□□□□□ -0.8
PPFIA1-219ENST00000531657 PODXLO00592 558 aa10.03□□□□□ -0.8
PPFIA1-219ENST00000531657 CA4P22748 312 aa10.03□□□□□ -0.8
PPFIA1-219ENST00000531657 MAGEA4P43358 317 aa10.03□□□□□ -0.8
PPFIA1-219ENST00000531657 TRIM32Q13049 653 aa10.03□□□□□ -0.8
PPFIA1-219ENST00000531657 BMPR2Q13873 1038 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms