RNA–Protein interactions for RNA: ENST00000531589.5

SF3B2-212, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 2

Gene SF3B2, Length 616 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-212ENST00000531589 USP25Q9UHP3 1055 aa14.07□□□□□ -0.16
SF3B2-212ENST00000531589 NCANO14594 1321 aa14.07□□□□□ -0.16
SF3B2-212ENST00000531589 PTPRJQ12913 1337 aa14.07□□□□□ -0.16
SF3B2-212ENST00000531589 TCHHQ07283 1943 aa14.07□□□□□ -0.16
SF3B2-212ENST00000531589 RIF1Q5UIP0 2472 aaKnown RBP14.06□□□□□ -0.16
SF3B2-212ENST00000531589 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.06□□□□□ -0.16
SF3B2-212ENST00000531589 SPECC1L-ADORA2AF8WAN1 911 aa14.06□□□□□ -0.16
SF3B2-212ENST00000531589 EXOC3O60645 756 aa14.06□□□□□ -0.16
SF3B2-212ENST00000531589 PRAMEF12O95522 483 aa14.06□□□□□ -0.16
SF3B2-212ENST00000531589 MYL1P05976 194 aa14.06□□□□□ -0.16
SF3B2-212ENST00000531589 CHRNB1P11230 501 aa14.06□□□□□ -0.16
SF3B2-212ENST00000531589 WARSP23381 471 aaKnown RBP14.06□□□□□ -0.16
SF3B2-212ENST00000531589 MAGEA11P43364 429 aa14.06□□□□□ -0.16
SF3B2-212ENST00000531589 AP3M2P53677 418 aa14.06□□□□□ -0.16
SF3B2-212ENST00000531589 CYP24A1Q07973 514 aa14.06□□□□□ -0.16
SF3B2-212ENST00000531589 TRPC3Q13507 836 aa14.06□□□□□ -0.16
SF3B2-212ENST00000531589 CUL4BQ13620 913 aa14.06□□□□□ -0.16
SF3B2-212ENST00000531589 DDR2Q16832 855 aa14.06□□□□□ -0.16
SF3B2-212ENST00000531589 ITPRIPL2Q3MIP1 535 aa14.06□□□□□ -0.16
SF3B2-212ENST00000531589 CC2D1AQ6P1N0 951 aaPredicted RBP14.06□□□□□ -0.16
SF3B2-212ENST00000531589 FAM171BQ6P995 826 aa14.06□□□□□ -0.16
SF3B2-212ENST00000531589 LIMS2Q7Z4I7 341 aa14.06□□□□□ -0.16
SF3B2-212ENST00000531589 MON1AQ86VX9 555 aa14.06□□□□□ -0.16
SF3B2-212ENST00000531589 OSTM1Q86WC4 334 aa14.06□□□□□ -0.16
SF3B2-212ENST00000531589 SCN4BQ8IWT1 228 aa14.06□□□□□ -0.16
SF3B2-212ENST00000531589 SYNPOQ8N3V7 929 aa14.06□□□□□ -0.16
SF3B2-212ENST00000531589 NELL1Q92832 810 aa14.06□□□□□ -0.16
SF3B2-212ENST00000531589 SECISBP2LQ93073 1101 aaKnown RBP14.06□□□□□ -0.16
SF3B2-212ENST00000531589 FAM84AQ96KN4 292 aa14.06□□□□□ -0.16
SF3B2-212ENST00000531589 LRRC3BQ96PB8 259 aa14.06□□□□□ -0.16
SF3B2-212ENST00000531589 SYT15Q9BQS2 421 aa14.06□□□□□ -0.16
SF3B2-212ENST00000531589 SNX25Q9H3E2 840 aa14.06□□□□□ -0.16
SF3B2-212ENST00000531589 TDP1Q9NUW8 608 aa14.06□□□□□ -0.16
SF3B2-212ENST00000531589 GTSE1Q9NYZ3 720 aa14.06□□□□□ -0.16
SF3B2-212ENST00000531589 COL4A3Q01955 1670 aa14.06□□□□□ -0.16
SF3B2-212ENST00000531589 PHACTR2O75167 634 aa14.05□□□□□ -0.16
SF3B2-212ENST00000531589 TACC1O75410 805 aa14.05□□□□□ -0.16
SF3B2-212ENST00000531589 CMA1P23946 247 aa14.05□□□□□ -0.16
SF3B2-212ENST00000531589 ANXA13P27216 316 aa14.05□□□□□ -0.16
SF3B2-212ENST00000531589 CASP1P29466 404 aa14.05□□□□□ -0.16
SF3B2-212ENST00000531589 ATICP31939 592 aa14.05□□□□□ -0.16
SF3B2-212ENST00000531589 CTHP32929 405 aa14.05□□□□□ -0.16
SF3B2-212ENST00000531589 GNL1P36915 607 aaPredicted RBP14.05□□□□□ -0.16
SF3B2-212ENST00000531589 CXCL12P48061 93 aa14.05□□□□□ -0.16
SF3B2-212ENST00000531589 PDE6CP51160 858 aa14.05□□□□□ -0.16
SF3B2-212ENST00000531589 TNNC1P63316 161 aa14.05□□□□□ -0.16
SF3B2-212ENST00000531589 KRT85P78386 507 aa14.05□□□□□ -0.16
SF3B2-212ENST00000531589 PKP1Q13835 747 aa14.05□□□□□ -0.16
SF3B2-212ENST00000531589 ZNF268Q14587 947 aaPredicted RBP14.05□□□□□ -0.16
SF3B2-212ENST00000531589 TXNDC8Q6A555 127 aa14.05□□□□□ -0.16
SF3B2-212ENST00000531589 SCARA3Q6AZY7 606 aa14.05□□□□□ -0.16
SF3B2-212ENST00000531589 TMEM150AQ86TG1 271 aa14.05□□□□□ -0.16
SF3B2-212ENST00000531589 SPEM1Q8N4L4 309 aa14.05□□□□□ -0.16
SF3B2-212ENST00000531589 SYAP1Q96A49 352 aaPredicted RBP14.05□□□□□ -0.16
SF3B2-212ENST00000531589 EXOC4Q96A65 974 aa14.05□□□□□ -0.16
SF3B2-212ENST00000531589 ZFYVE19Q96K21 471 aa14.05□□□□□ -0.16
SF3B2-212ENST00000531589 GKN1Q9NS71 199 aa14.05□□□□□ -0.16
SF3B2-212ENST00000531589 EXOC1Q9NV70 894 aa14.05□□□□□ -0.16
SF3B2-212ENST00000531589 SERTAD1Q9UHV2 236 aa14.05□□□□□ -0.16
SF3B2-212ENST00000531589 ATP6V1DQ9Y5K8 247 aa14.05□□□□□ -0.16
SF3B2-212ENST00000531589 TRAV19A0A0A6YYK7 116 aa14.04□□□□□ -0.16
SF3B2-212ENST00000531589 KIF20AO95235 890 aa14.04□□□□□ -0.16
SF3B2-212ENST00000531589 STAU1O95793 577 aaKnown RBP14.04□□□□□ -0.16
SF3B2-212ENST00000531589 CST3P01034 146 aaPredicted RBP14.04□□□□□ -0.16
SF3B2-212ENST00000531589 USP17L7P0C7H9 530 aa14.04□□□□□ -0.16
SF3B2-212ENST00000531589 LMO2P25791 158 aa14.04□□□□□ -0.16
SF3B2-212ENST00000531589 GRIK1P39086 918 aa14.04□□□□□ -0.16
SF3B2-212ENST00000531589 SOX9P48436 509 aa14.04□□□□□ -0.16
SF3B2-212ENST00000531589 GPR15P49685 360 aa14.04□□□□□ -0.16
SF3B2-212ENST00000531589 CYP27A1Q02318 531 aa14.04□□□□□ -0.16
SF3B2-212ENST00000531589 FAM160A1Q05DH4 1040 aa14.04□□□□□ -0.16
SF3B2-212ENST00000531589 WDR72Q3MJ13 1102 aa14.04□□□□□ -0.16
SF3B2-212ENST00000531589 SDHAF4Q5VUM1 108 aa14.04□□□□□ -0.16
SF3B2-212ENST00000531589 TSSK4Q6SA08 328 aa14.04□□□□□ -0.16
SF3B2-212ENST00000531589 GPR161Q8N6U8 529 aaKnown RBP14.04□□□□□ -0.16
SF3B2-212ENST00000531589 SUMF1Q8NBK3 374 aa14.04□□□□□ -0.16
SF3B2-212ENST00000531589 MYCBPAPQ8TBZ2 947 aa14.04□□□□□ -0.16
SF3B2-212ENST00000531589 KBTBD7Q8WVZ9 684 aa14.04□□□□□ -0.16
SF3B2-212ENST00000531589 USP13Q92995 863 aaPredicted RBP14.04□□□□□ -0.16
SF3B2-212ENST00000531589 MYLPFQ96A32 169 aa14.04□□□□□ -0.16
SF3B2-212ENST00000531589 CCDC47Q96A33 483 aaKnown RBP14.04□□□□□ -0.16
SF3B2-212ENST00000531589 PAGE5Q96GU1 130 aa14.04□□□□□ -0.16
SF3B2-212ENST00000531589 SPATA17Q96L03 361 aa14.04□□□□□ -0.16
SF3B2-212ENST00000531589 SPATA32Q96LK8 384 aa14.04□□□□□ -0.16
SF3B2-212ENST00000531589 FAM83CQ9BQN1 747 aa14.04□□□□□ -0.16
SF3B2-212ENST00000531589 SMG9Q9H0W8 520 aaKnown RBP14.04□□□□□ -0.16
SF3B2-212ENST00000531589 NCDNQ9UBB6 729 aa14.04□□□□□ -0.16
SF3B2-212ENST00000531589 FAM186AA6NE01 2351 aa14.04□□□□□ -0.16
SF3B2-212ENST00000531589 MYO15AQ9UKN7 3530 aa14.04□□□□□ -0.16
SF3B2-212ENST00000531589 CACNA1IQ9P0X4 2223 aa14.03□□□□□ -0.16
SF3B2-212ENST00000531589 TRIM66O15016 1216 aa14.03□□□□□ -0.16
SF3B2-212ENST00000531589 ACTN4O43707 911 aaKnown RBP14.03□□□□□ -0.16
SF3B2-212ENST00000531589 LILRB5O75023 590 aa14.03□□□□□ -0.16
SF3B2-212ENST00000531589 ATP2C2O75185 946 aa14.03□□□□□ -0.16
SF3B2-212ENST00000531589 CKMP06732 381 aa14.03□□□□□ -0.16
SF3B2-212ENST00000531589 PDGFRBP09619 1106 aa14.03□□□□□ -0.16
SF3B2-212ENST00000531589 PFKLP17858 780 aa14.03□□□□□ -0.16
SF3B2-212ENST00000531589 ID4P47928 161 aa14.03□□□□□ -0.16
SF3B2-212ENST00000531589 PSMC1P62191 440 aaKnown RBP14.03□□□□□ -0.16
SF3B2-212ENST00000531589 FOXK2Q01167 660 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms