RNA–Protein interactions for RNA: ENST00000531542.1

AMBRA1-210, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 3

Gene AMBRA1, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-210ENST00000531542 SATB1Q01826 763 aa14.29□□□□□ -0.12
AMBRA1-210ENST00000531542 BFSP1Q12934 665 aa14.29□□□□□ -0.12
AMBRA1-210ENST00000531542 SCARA3Q6AZY7 606 aa14.29□□□□□ -0.12
AMBRA1-210ENST00000531542 LAIR1Q6GTX8 287 aa14.29□□□□□ -0.12
AMBRA1-210ENST00000531542 SHC4Q6S5L8 630 aa14.29□□□□□ -0.12
AMBRA1-210ENST00000531542 VSTM1Q6UX27 236 aa14.29□□□□□ -0.12
AMBRA1-210ENST00000531542 C4orf50Q6ZRC1 276 aa14.29□□□□□ -0.12
AMBRA1-210ENST00000531542 CBWD2Q8IUF1 395 aa14.29□□□□□ -0.12
AMBRA1-210ENST00000531542 MAB21L3Q8N8X9 362 aa14.29□□□□□ -0.12
AMBRA1-210ENST00000531542 HPDLQ96IR7 371 aa14.29□□□□□ -0.12
AMBRA1-210ENST00000531542 ZFYVE19Q96K21 471 aa14.29□□□□□ -0.12
AMBRA1-210ENST00000531542 SPATA17Q96L03 361 aa14.29□□□□□ -0.12
AMBRA1-210ENST00000531542 GKN1Q9NS71 199 aa14.29□□□□□ -0.12
AMBRA1-210ENST00000531542 CGNQ9P2M7 1197 aaKnown RBP14.29□□□□□ -0.12
AMBRA1-210ENST00000531542 GTF3C4Q9UKN8 822 aa14.29□□□□□ -0.12
AMBRA1-210ENST00000531542 CDH9Q9ULB4 789 aa14.29□□□□□ -0.12
AMBRA1-210ENST00000531542 R3HCC1Q9Y3T6 440 aaKnown RBP14.29□□□□□ -0.12
AMBRA1-210ENST00000531542 CCDC163A0A0D9SF12 145 aa14.28□□□□□ -0.12
AMBRA1-210ENST00000531542 PVALEFA0A1B0GWK0 134 aa14.28□□□□□ -0.12
AMBRA1-210ENST00000531542 TGFB1I1O43294 461 aa14.28□□□□□ -0.12
AMBRA1-210ENST00000531542 TCF3P15923 654 aa14.28□□□□□ -0.12
AMBRA1-210ENST00000531542 WARSP23381 471 aaKnown RBP14.28□□□□□ -0.12
AMBRA1-210ENST00000531542 LMNB2Q03252 620 aa14.28□□□□□ -0.12
AMBRA1-210ENST00000531542 TNK2Q07912 1038 aa14.28□□□□□ -0.12
AMBRA1-210ENST00000531542 PTPRJQ12913 1337 aa14.28□□□□□ -0.12
AMBRA1-210ENST00000531542 RUNX3Q13761 415 aa14.28□□□□□ -0.12
AMBRA1-210ENST00000531542 PDGFRLQ15198 375 aa14.28□□□□□ -0.12
AMBRA1-210ENST00000531542 DDR2Q16832 855 aa14.28□□□□□ -0.12
AMBRA1-210ENST00000531542 TMEM196Q5HYL7 178 aa14.28□□□□□ -0.12
AMBRA1-210ENST00000531542 FAM26FQ5R3K3 315 aa14.28□□□□□ -0.12
AMBRA1-210ENST00000531542 TXNDC8Q6A555 127 aa14.28□□□□□ -0.12
AMBRA1-210ENST00000531542 UNC13DQ70J99 1090 aa14.28□□□□□ -0.12
AMBRA1-210ENST00000531542 TICRRQ7Z2Z1 1910 aa14.28□□□□□ -0.12
AMBRA1-210ENST00000531542 LONP2Q86WA8 852 aa14.28□□□□□ -0.12
AMBRA1-210ENST00000531542 OSTM1Q86WC4 334 aa14.28□□□□□ -0.12
AMBRA1-210ENST00000531542 SPATA2LQ8IUW3 424 aaPredicted RBP14.28□□□□□ -0.12
AMBRA1-210ENST00000531542 GPIHBP1Q8IV16 184 aa14.28□□□□□ -0.12
AMBRA1-210ENST00000531542 C12orf56Q8IXR9 622 aa14.28□□□□□ -0.12
AMBRA1-210ENST00000531542 KIAA1958Q8N8K9 716 aa14.28□□□□□ -0.12
AMBRA1-210ENST00000531542 GLIS3Q8NEA6 775 aa14.28□□□□□ -0.12
AMBRA1-210ENST00000531542 OR5B17Q8NGF7 314 aa14.28□□□□□ -0.12
AMBRA1-210ENST00000531542 NUP210Q8TEM1 1887 aaPredicted RBP14.28□□□□□ -0.12
AMBRA1-210ENST00000531542 TMEM174Q8WUU8 243 aa14.28□□□□□ -0.12
AMBRA1-210ENST00000531542 KBTBD7Q8WVZ9 684 aa14.28□□□□□ -0.12
AMBRA1-210ENST00000531542 AGPAT3Q9NRZ7 376 aa14.28□□□□□ -0.12
AMBRA1-210ENST00000531542 TFIP11Q9UBB9 837 aaKnown RBP14.28□□□□□ -0.12
AMBRA1-210ENST00000531542 CCL26Q9Y258 94 aa14.28□□□□□ -0.12
AMBRA1-210ENST00000531542 TACC1O75410 805 aa14.27□□□□□ -0.13
AMBRA1-210ENST00000531542 TADA3O75528 432 aa14.27□□□□□ -0.13
AMBRA1-210ENST00000531542 STAU1O95793 577 aaKnown RBP14.27□□□□□ -0.13
AMBRA1-210ENST00000531542 RETP07949 1114 aa14.27□□□□□ -0.13
AMBRA1-210ENST00000531542 ACAT1P24752 427 aaKnown RBP14.27□□□□□ -0.13
AMBRA1-210ENST00000531542 GPR15P49685 360 aa14.27□□□□□ -0.13
AMBRA1-210ENST00000531542 ASIC1P78348 528 aa14.27□□□□□ -0.13
AMBRA1-210ENST00000531542 FAM160A1Q05DH4 1040 aa14.27□□□□□ -0.13
AMBRA1-210ENST00000531542 PSMD6Q15008 389 aa14.27□□□□□ -0.13
AMBRA1-210ENST00000531542 PON2Q15165 354 aa14.27□□□□□ -0.13
AMBRA1-210ENST00000531542 SNRNP35Q16560 246 aaKnown RBP14.27□□□□□ -0.13
AMBRA1-210ENST00000531542 BMT2Q1RMZ1 405 aa14.27□□□□□ -0.13
AMBRA1-210ENST00000531542 TRAPPC11Q7Z392 1133 aa14.27□□□□□ -0.13
AMBRA1-210ENST00000531542 DGLUCYQ7Z3D6 616 aa14.27□□□□□ -0.13
AMBRA1-210ENST00000531542 FSIP1Q8NA03 581 aa14.27□□□□□ -0.13
AMBRA1-210ENST00000531542 EXOC4Q96A65 974 aa14.27□□□□□ -0.13
AMBRA1-210ENST00000531542 DHX58Q96C10 678 aa14.27□□□□□ -0.13
AMBRA1-210ENST00000531542 SMG9Q9H0W8 520 aaKnown RBP14.27□□□□□ -0.13
AMBRA1-210ENST00000531542 HPS4Q9NQG7 708 aa14.27□□□□□ -0.13
AMBRA1-210ENST00000531542 RBM12Q9NTZ6 932 aaKnown RBP14.27□□□□□ -0.13
AMBRA1-210ENST00000531542 EHD2Q9NZN4 543 aa14.27□□□□□ -0.13
AMBRA1-210ENST00000531542 GMEB2Q9UKD1 530 aa14.27□□□□□ -0.13
AMBRA1-210ENST00000531542 RAB23Q9ULC3 237 aa14.27□□□□□ -0.13
AMBRA1-210ENST00000531542 CHURC1-FNTBB4DL54 471 aa14.26□□□□□ -0.13
AMBRA1-210ENST00000531542 FOXD2O60548 495 aaPredicted RBP14.26□□□□□ -0.13
AMBRA1-210ENST00000531542 ATG13O75143 517 aa14.26□□□□□ -0.13
AMBRA1-210ENST00000531542 USP17L7P0C7H9 530 aa14.26□□□□□ -0.13
AMBRA1-210ENST00000531542 ZSCAN22P10073 491 aaPredicted RBP14.26□□□□□ -0.13
AMBRA1-210ENST00000531542 PPP3CCP48454 512 aa14.26□□□□□ -0.13
AMBRA1-210ENST00000531542 PDE6CP51160 858 aa14.26□□□□□ -0.13
AMBRA1-210ENST00000531542 CDR1P51861 262 aa14.26□□□□□ -0.13
AMBRA1-210ENST00000531542 GRSF1Q12849 480 aaKnown RBP eCLIP14.26□□□□□ -0.13
AMBRA1-210ENST00000531542 CC2D1AQ6P1N0 951 aaPredicted RBP14.26□□□□□ -0.13
AMBRA1-210ENST00000531542 Q6ZS52 159 aa14.26□□□□□ -0.13
AMBRA1-210ENST00000531542 HS2ST1Q7LGA3 356 aa14.26□□□□□ -0.13
AMBRA1-210ENST00000531542 WDR5BQ86VZ2 330 aa14.26□□□□□ -0.13
AMBRA1-210ENST00000531542 XXYLT1Q8NBI6 393 aa14.26□□□□□ -0.13
AMBRA1-210ENST00000531542 SCFD1Q8WVM8 642 aa14.26□□□□□ -0.13
AMBRA1-210ENST00000531542 HPS3Q969F9 1004 aa14.26□□□□□ -0.13
AMBRA1-210ENST00000531542 CHFRQ96EP1 664 aa14.26□□□□□ -0.13
AMBRA1-210ENST00000531542 SYT15Q9BQS2 421 aa14.26□□□□□ -0.13
AMBRA1-210ENST00000531542 TTLL2Q9BWV7 592 aa14.26□□□□□ -0.13
AMBRA1-210ENST00000531542 CRTAC1Q9NQ79 661 aa14.26□□□□□ -0.13
AMBRA1-210ENST00000531542 FOXD4L1Q9NU39 408 aa14.26□□□□□ -0.13
AMBRA1-210ENST00000531542 GCNT4Q9P109 453 aa14.26□□□□□ -0.13
AMBRA1-210ENST00000531542 MAGEC2Q9UBF1 373 aaPredicted RBP14.26□□□□□ -0.13
AMBRA1-210ENST00000531542 MAGED2Q9UNF1 606 aaPredicted RBP14.26□□□□□ -0.13
AMBRA1-210ENST00000531542 DNAH14Q0VDD8 3507 aa14.25□□□□□ -0.13
AMBRA1-210ENST00000531542 TRAV19A0A0A6YYK7 116 aa14.25□□□□□ -0.13
AMBRA1-210ENST00000531542 OTOL1A6NHN0 477 aaPredicted RBP14.25□□□□□ -0.13
AMBRA1-210ENST00000531542 HRO43593 1189 aa14.25□□□□□ -0.13
AMBRA1-210ENST00000531542 LMO2P25791 158 aa14.25□□□□□ -0.13
AMBRA1-210ENST00000531542 ATICP31939 592 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms