RNA–Protein interactions for RNA: ENST00000529866.5

COPB1-207, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 2

Gene COPB1, Length 729 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-207ENST00000529866 TMEM132DQ14C87 1099 aa11.25□□□□□ -0.61
COPB1-207ENST00000529866 ZNF77Q15935 545 aa11.25□□□□□ -0.61
COPB1-207ENST00000529866 ENOX2Q16206 610 aaKnown RBP11.25□□□□□ -0.61
COPB1-207ENST00000529866 CRY1Q16526 586 aa11.25□□□□□ -0.61
COPB1-207ENST00000529866 NFE2Q16621 373 aaPredicted RBP11.25□□□□□ -0.61
COPB1-207ENST00000529866 C2orf27AQ580R0 203 aa11.25□□□□□ -0.61
COPB1-207ENST00000529866 SPDYCQ5MJ68 293 aa11.25□□□□□ -0.61
COPB1-207ENST00000529866 LYSMD4Q5XG99 296 aa11.25□□□□□ -0.61
COPB1-207ENST00000529866 RABEPKQ7Z6M1 372 aa11.25□□□□□ -0.61
COPB1-207ENST00000529866 IGSF22Q8N9C0 903 aa11.25□□□□□ -0.61
COPB1-207ENST00000529866 RIN3Q8TB24 985 aa11.25□□□□□ -0.61
COPB1-207ENST00000529866 USP33Q8TEY7 942 aa11.25□□□□□ -0.61
COPB1-207ENST00000529866 EZH1Q92800 747 aaPredicted RBP11.25□□□□□ -0.61
COPB1-207ENST00000529866 PYM1Q9BRP8 204 aaKnown RBP11.25□□□□□ -0.61
COPB1-207ENST00000529866 TRPC7Q9HCX4 862 aa11.25□□□□□ -0.61
COPB1-207ENST00000529866 KCND2Q9NZV8 630 aa11.25□□□□□ -0.61
COPB1-207ENST00000529866 LARSQ9P2J5 1176 aaKnown RBP11.25□□□□□ -0.61
COPB1-207ENST00000529866 MMP17Q9ULZ9 603 aa11.25□□□□□ -0.61
COPB1-207ENST00000529866 WNT6Q9Y6F9 365 aa11.25□□□□□ -0.61
COPB1-207ENST00000529866 GCN1Q92616 2671 aaKnown RBP11.24□□□□□ -0.61
COPB1-207ENST00000529866 ACACAQ13085 2346 aa11.24□□□□□ -0.61
COPB1-207ENST00000529866 PIRO00625 290 aa11.24□□□□□ -0.61
COPB1-207ENST00000529866 OPHN1O60890 802 aa11.24□□□□□ -0.61
COPB1-207ENST00000529866 CFIP05156 583 aa11.24□□□□□ -0.61
COPB1-207ENST00000529866 PDE6CP51160 858 aa11.24□□□□□ -0.61
COPB1-207ENST00000529866 CDR1P51861 262 aa11.24□□□□□ -0.61
COPB1-207ENST00000529866 RPL10AP62906 217 aaKnown RBP11.24□□□□□ -0.61
COPB1-207ENST00000529866 RAD51AP2Q09MP3 1159 aa11.24□□□□□ -0.61
COPB1-207ENST00000529866 KCNB1Q14721 858 aa11.24□□□□□ -0.61
COPB1-207ENST00000529866 EML3Q32P44 896 aa11.24□□□□□ -0.61
COPB1-207ENST00000529866 JADE1Q6IE81 842 aa11.24□□□□□ -0.61
COPB1-207ENST00000529866 SLC23A3Q6PIS1 610 aa11.24□□□□□ -0.61
COPB1-207ENST00000529866 ARMCX6Q7L4S7 300 aa11.24□□□□□ -0.61
COPB1-207ENST00000529866 PIP4P1Q86T03 277 aa11.24□□□□□ -0.61
COPB1-207ENST00000529866 FSIP1Q8NA03 581 aa11.24□□□□□ -0.61
COPB1-207ENST00000529866 CEP76Q8TAP6 659 aa11.24□□□□□ -0.61
COPB1-207ENST00000529866 C8orf76Q96K31 380 aa11.24□□□□□ -0.61
COPB1-207ENST00000529866 MSTO1Q9BUK6 570 aa11.24□□□□□ -0.61
COPB1-207ENST00000529866 POLMQ9NP87 494 aaPredicted RBP11.24□□□□□ -0.61
COPB1-207ENST00000529866 BCCIPQ9P287 314 aaKnown RBP eCLIP11.24□□□□□ -0.61
COPB1-207ENST00000529866 DERAQ9Y315 318 aa11.24□□□□□ -0.61
COPB1-207ENST00000529866 TRIP11Q15643 1979 aa11.24□□□□□ -0.61
COPB1-207ENST00000529866 ASCC3Q8N3C0 2202 aaKnown RBP11.24□□□□□ -0.61
COPB1-207ENST00000529866 HELZ2Q9BYK8 2649 aaKnown RBP11.23□□□□□ -0.61
COPB1-207ENST00000529866 APC2O95996 2303 aa11.23□□□□□ -0.61
COPB1-207ENST00000529866 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa11.23□□□□□ -0.61
COPB1-207ENST00000529866 FAM221BA6H8Z2 402 aa11.23□□□□□ -0.61
COPB1-207ENST00000529866 EIF4E1BA6NMX2 242 aaKnown RBP11.23□□□□□ -0.61
COPB1-207ENST00000529866 LAD1O00515 517 aa11.23□□□□□ -0.61
COPB1-207ENST00000529866 PRPF40AO75400 957 aaKnown RBP11.23□□□□□ -0.61
COPB1-207ENST00000529866 ADRB2P07550 413 aa11.23□□□□□ -0.61
COPB1-207ENST00000529866 NFICP08651 508 aa11.23□□□□□ -0.61
COPB1-207ENST00000529866 P2RY2P41231 377 aa11.23□□□□□ -0.61
COPB1-207ENST00000529866 MRPS21P82921 87 aaKnown RBP11.23□□□□□ -0.61
COPB1-207ENST00000529866 GFPT1Q06210 699 aaPredicted RBP11.23□□□□□ -0.61
COPB1-207ENST00000529866 SEMA3BQ13214 749 aa11.23□□□□□ -0.61
COPB1-207ENST00000529866 ZRSR1Q15695 479 aaKnown RBP11.23□□□□□ -0.61
COPB1-207ENST00000529866 HSF5Q4G112 596 aaPredicted RBP11.23□□□□□ -0.61
COPB1-207ENST00000529866 WSCD1Q658N2 575 aa11.23□□□□□ -0.61
COPB1-207ENST00000529866 LRRTM3Q86VH5 581 aa11.23□□□□□ -0.61
COPB1-207ENST00000529866 EFCAB13Q8IY85 973 aa11.23□□□□□ -0.61
COPB1-207ENST00000529866 TMEFF1Q8IYR6 380 aa11.23□□□□□ -0.61
COPB1-207ENST00000529866 KCTD17Q8N5Z5 321 aa11.23□□□□□ -0.61
COPB1-207ENST00000529866 OLIG1Q8TAK6 271 aa11.23□□□□□ -0.61
COPB1-207ENST00000529866 SH3RF2Q8TEC5 729 aa11.23□□□□□ -0.61
COPB1-207ENST00000529866 LEO1Q8WVC0 666 aaPredicted RBP11.23□□□□□ -0.61
COPB1-207ENST00000529866 TRMT2BQ96GJ1 504 aaKnown RBP11.23□□□□□ -0.61
COPB1-207ENST00000529866 ZNF560Q96MR9 790 aa11.23□□□□□ -0.61
COPB1-207ENST00000529866 GTPBP2Q9BX10 602 aaKnown RBP11.23□□□□□ -0.61
COPB1-207ENST00000529866 CCSER1Q9C0I3 900 aa11.23□□□□□ -0.61
COPB1-207ENST00000529866 HAPLN2Q9GZV7 340 aa11.23□□□□□ -0.61
COPB1-207ENST00000529866 ABCB6Q9NP58 842 aa11.23□□□□□ -0.61
COPB1-207ENST00000529866 LIMCH1Q9UPQ0 1083 aa11.23□□□□□ -0.61
COPB1-207ENST00000529866 C2CD2Q9Y426 696 aa11.23□□□□□ -0.61
COPB1-207ENST00000529866 GPSM3Q9Y4H4 160 aa11.23□□□□□ -0.61
COPB1-207ENST00000529866 CITO14578 2027 aa11.23□□□□□ -0.61
COPB1-207ENST00000529866 ANO9A1A5B4 782 aa11.22□□□□□ -0.61
COPB1-207ENST00000529866 AP5Z1O43299 807 aa11.22□□□□□ -0.61
COPB1-207ENST00000529866 FAM189A1O60320 539 aa11.22□□□□□ -0.61
COPB1-207ENST00000529866 TADA3O75528 432 aa11.22□□□□□ -0.61
COPB1-207ENST00000529866 NOL4O94818 638 aa11.22□□□□□ -0.61
COPB1-207ENST00000529866 PIGRP01833 764 aa11.22□□□□□ -0.61
COPB1-207ENST00000529866 TCF3P15923 654 aa11.22□□□□□ -0.61
COPB1-207ENST00000529866 CDC25AP30304 524 aa11.22□□□□□ -0.61
COPB1-207ENST00000529866 PTGER3P43115 390 aa11.22□□□□□ -0.61
COPB1-207ENST00000529866 NCKAP1LP55160 1127 aa11.22□□□□□ -0.61
COPB1-207ENST00000529866 DUOXA1Q1HG43 343 aa11.22□□□□□ -0.61
COPB1-207ENST00000529866 GON4LQ3T8J9 2241 aa11.22□□□□□ -0.61
COPB1-207ENST00000529866 SV2CQ496J9 727 aa11.22□□□□□ -0.61
COPB1-207ENST00000529866 EOGTQ5NDL2 527 aa11.22□□□□□ -0.61
COPB1-207ENST00000529866 IGSF10Q6WRI0 2623 aa11.22□□□□□ -0.61
COPB1-207ENST00000529866 PDZD3Q86UT5 571 aa11.22□□□□□ -0.61
COPB1-207ENST00000529866 CHCHD4Q8N4Q1 142 aa11.22□□□□□ -0.61
COPB1-207ENST00000529866 CCDC33Q8N5R6 958 aa11.22□□□□□ -0.61
COPB1-207ENST00000529866 SPATA18Q8TC71 538 aa11.22□□□□□ -0.61
COPB1-207ENST00000529866 RLN3Q8WXF3 142 aa11.22□□□□□ -0.61
COPB1-207ENST00000529866 KCNN1Q92952 543 aa11.22□□□□□ -0.61
COPB1-207ENST00000529866 COL26A1Q96A83 441 aa11.22□□□□□ -0.61
COPB1-207ENST00000529866 MYRFLQ96LU7 910 aa11.22□□□□□ -0.61
COPB1-207ENST00000529866 FNBP1Q96RU3 617 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms