RNA–Protein interactions for RNA: ENST00000529856.5

CCDC90B-216, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 1,039 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-216ENST00000529856 ASGR2P07307 311 aa13.51□□□□□ -0.25
CCDC90B-216ENST00000529856 CCDC192P0DO97 292 aa13.51□□□□□ -0.25
CCDC90B-216ENST00000529856 MYL4P12829 197 aa13.51□□□□□ -0.25
CCDC90B-216ENST00000529856 CEBPBP17676 345 aa13.51□□□□□ -0.25
CCDC90B-216ENST00000529856 BDNFP23560 247 aa13.51□□□□□ -0.25
CCDC90B-216ENST00000529856 ERCC5P28715 1186 aaPredicted RBP13.51□□□□□ -0.25
CCDC90B-216ENST00000529856 FMO5P49326 533 aa13.51□□□□□ -0.25
CCDC90B-216ENST00000529856 GPR15P49685 360 aa13.51□□□□□ -0.25
CCDC90B-216ENST00000529856 NDST1P52848 882 aa13.51□□□□□ -0.25
CCDC90B-216ENST00000529856 RPL10AP62906 217 aaKnown RBP13.51□□□□□ -0.25
CCDC90B-216ENST00000529856 ZXDAP98168 799 aa13.51□□□□□ -0.25
CCDC90B-216ENST00000529856 CYP27A1Q02318 531 aa13.51□□□□□ -0.25
CCDC90B-216ENST00000529856 DDR2Q16832 855 aa13.51□□□□□ -0.25
CCDC90B-216ENST00000529856 CT47A1Q5JQC4 288 aaPredicted RBP13.51□□□□□ -0.25
CCDC90B-216ENST00000529856 WDR44Q5JSH3 913 aa13.51□□□□□ -0.25
CCDC90B-216ENST00000529856 VSTM1Q6UX27 236 aa13.51□□□□□ -0.25
CCDC90B-216ENST00000529856 NPAS3Q8IXF0 933 aa13.51□□□□□ -0.25
CCDC90B-216ENST00000529856 CRYBG2Q8N1P7 616 aa13.51□□□□□ -0.25
CCDC90B-216ENST00000529856 GPR152Q8TDT2 470 aa13.51□□□□□ -0.25
CCDC90B-216ENST00000529856 GIPC2Q8TF65 315 aa13.51□□□□□ -0.25
CCDC90B-216ENST00000529856 ING5Q8WYH8 240 aa13.51□□□□□ -0.25
CCDC90B-216ENST00000529856 EDAQ92838 391 aa13.51□□□□□ -0.25
CCDC90B-216ENST00000529856 TATDN2Q93075 761 aa13.51□□□□□ -0.25
CCDC90B-216ENST00000529856 MCRS1Q96EZ8 462 aa13.51□□□□□ -0.25
CCDC90B-216ENST00000529856 TNIP3Q96KP6 325 aa13.51□□□□□ -0.25
CCDC90B-216ENST00000529856 ZNF334Q9HCZ1 680 aaPredicted RBP13.51□□□□□ -0.25
CCDC90B-216ENST00000529856 GDE1Q9NZC3 331 aa13.51□□□□□ -0.25
CCDC90B-216ENST00000529856 SORCS3Q9UPU3 1222 aa13.51□□□□□ -0.25
CCDC90B-216ENST00000529856 P4HA2O15460 535 aa13.5□□□□□ -0.25
CCDC90B-216ENST00000529856 FGF19O95750 216 aa13.5□□□□□ -0.25
CCDC90B-216ENST00000529856 HMGA1P17096 107 aaKnown RBP13.5□□□□□ -0.25
CCDC90B-216ENST00000529856 GJA1P17302 382 aa13.5□□□□□ -0.25
CCDC90B-216ENST00000529856 INCA1Q0VD86 236 aa13.5□□□□□ -0.25
CCDC90B-216ENST00000529856 KCNH2Q12809 1159 aa13.5□□□□□ -0.25
CCDC90B-216ENST00000529856 CCDC183Q5T5S1 534 aa13.5□□□□□ -0.25
CCDC90B-216ENST00000529856 SDHAF4Q5VUM1 108 aa13.5□□□□□ -0.25
CCDC90B-216ENST00000529856 ACOT1Q86TX2 421 aa13.5□□□□□ -0.25
CCDC90B-216ENST00000529856 IRF2BP1Q8IU81 584 aa13.5□□□□□ -0.25
CCDC90B-216ENST00000529856 SHKBP1Q8TBC3 707 aa13.5□□□□□ -0.25
CCDC90B-216ENST00000529856 RSAD2Q8WXG1 361 aa13.5□□□□□ -0.25
CCDC90B-216ENST00000529856 B3GNT5Q9BYG0 378 aa13.5□□□□□ -0.25
CCDC90B-216ENST00000529856 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.5□□□□□ -0.25
CCDC90B-216ENST00000529856 PTPRDP23468 1912 aa13.5□□□□□ -0.25
CCDC90B-216ENST00000529856 A0A1W2PRU2 124 aa13.49□□□□□ -0.25
CCDC90B-216ENST00000529856 CSH1P0DML2 217 aa13.49□□□□□ -0.25
CCDC90B-216ENST00000529856 CSH2P0DML3 217 aa13.49□□□□□ -0.25
CCDC90B-216ENST00000529856 GRIK1P39086 918 aa13.49□□□□□ -0.25
CCDC90B-216ENST00000529856 TDGQ13569 410 aa13.49□□□□□ -0.25
CCDC90B-216ENST00000529856 MTMR3Q13615 1198 aa13.49□□□□□ -0.25
CCDC90B-216ENST00000529856 HTR4Q13639 388 aa13.49□□□□□ -0.25
CCDC90B-216ENST00000529856 TAF12Q16514 161 aa13.49□□□□□ -0.25
CCDC90B-216ENST00000529856 TPD52L1Q16890 204 aaPredicted RBP13.49□□□□□ -0.25
CCDC90B-216ENST00000529856 PARM1Q6UWI2 310 aa13.49□□□□□ -0.25
CCDC90B-216ENST00000529856 GAREM2Q75VX8 874 aa13.49□□□□□ -0.25
CCDC90B-216ENST00000529856 MTSS1LQ765P7 747 aa13.49□□□□□ -0.25
CCDC90B-216ENST00000529856 SCN4BQ8IWT1 228 aa13.49□□□□□ -0.25
CCDC90B-216ENST00000529856 UBALD2Q8IYN6 164 aa13.49□□□□□ -0.25
CCDC90B-216ENST00000529856 SLC44A3Q8N4M1 653 aa13.49□□□□□ -0.25
CCDC90B-216ENST00000529856 WHAMMQ8TF30 809 aa13.49□□□□□ -0.25
CCDC90B-216ENST00000529856 CNOT6LQ96LI5 555 aaKnown RBP13.49□□□□□ -0.25
CCDC90B-216ENST00000529856 CEP295NLQ96MC4 621 aa13.49□□□□□ -0.25
CCDC90B-216ENST00000529856 ZSWIM3Q96MP5 696 aa13.49□□□□□ -0.25
CCDC90B-216ENST00000529856 C1QTNF1Q9BXJ1 281 aa13.49□□□□□ -0.25
CCDC90B-216ENST00000529856 GPR88Q9GZN0 384 aa13.49□□□□□ -0.25
CCDC90B-216ENST00000529856 THAP9Q9H5L6 903 aa13.49□□□□□ -0.25
CCDC90B-216ENST00000529856 FAM124BQ9H5Z6 455 aaPredicted RBP13.49□□□□□ -0.25
CCDC90B-216ENST00000529856 IL21Q9HBE4 155 aa13.49□□□□□ -0.25
CCDC90B-216ENST00000529856 HMGXB4Q9UGU5 601 aa13.49□□□□□ -0.25
CCDC90B-216ENST00000529856 SLC38A8A6NNN8 435 aa13.48□□□□□ -0.25
CCDC90B-216ENST00000529856 CLDN5O00501 218 aa13.48□□□□□ -0.25
CCDC90B-216ENST00000529856 CILPO75339 1184 aa13.48□□□□□ -0.25
CCDC90B-216ENST00000529856 NOL4O94818 638 aa13.48□□□□□ -0.25
CCDC90B-216ENST00000529856 AFPP02771 609 aaKnown RBP13.48□□□□□ -0.25
CCDC90B-216ENST00000529856 F11P03951 625 aa13.48□□□□□ -0.25
CCDC90B-216ENST00000529856 CD58P19256 250 aa13.48□□□□□ -0.25
CCDC90B-216ENST00000529856 GABRR2P28476 465 aa13.48□□□□□ -0.25
CCDC90B-216ENST00000529856 CETN1Q12798 172 aa13.48□□□□□ -0.25
CCDC90B-216ENST00000529856 ORC1Q13415 861 aa13.48□□□□□ -0.25
CCDC90B-216ENST00000529856 TEAD2Q15562 447 aa13.48□□□□□ -0.25
CCDC90B-216ENST00000529856 SASS6Q6UVJ0 657 aa13.48□□□□□ -0.25
CCDC90B-216ENST00000529856 PAQR9Q6ZVX9 377 aa13.48□□□□□ -0.25
CCDC90B-216ENST00000529856 CREBRFQ8IUR6 639 aa13.48□□□□□ -0.25
CCDC90B-216ENST00000529856 FUKQ8N0W3 1084 aa13.48□□□□□ -0.25
CCDC90B-216ENST00000529856 TTC39CQ8N584 583 aa13.48□□□□□ -0.25
CCDC90B-216ENST00000529856 EHBP1Q8NDI1 1231 aa13.48□□□□□ -0.25
CCDC90B-216ENST00000529856 STKLD1Q8NE28 680 aa13.48□□□□□ -0.25
CCDC90B-216ENST00000529856 ST13P5Q8NFI4 369 aaPredicted RBP13.48□□□□□ -0.25
CCDC90B-216ENST00000529856 LMO3Q8TAP4 145 aa13.48□□□□□ -0.25
CCDC90B-216ENST00000529856 FGF14Q92915 247 aa13.48□□□□□ -0.25
CCDC90B-216ENST00000529856 SPATA17Q96L03 361 aa13.48□□□□□ -0.25
CCDC90B-216ENST00000529856 C8orf48Q96LL4 319 aa13.48□□□□□ -0.25
CCDC90B-216ENST00000529856 MYRFLQ96LU7 910 aa13.48□□□□□ -0.25
CCDC90B-216ENST00000529856 TWNKQ96RR1 684 aa13.48□□□□□ -0.25
CCDC90B-216ENST00000529856 RPP25Q9BUL9 199 aaKnown RBP13.48□□□□□ -0.25
CCDC90B-216ENST00000529856 NT5C1AQ9BXI3 368 aa13.48□□□□□ -0.25
CCDC90B-216ENST00000529856 ZNF518BQ9C0D4 1074 aa13.48□□□□□ -0.25
CCDC90B-216ENST00000529856 ELOVL4Q9GZR5 314 aa13.48□□□□□ -0.25
CCDC90B-216ENST00000529856 ATXN3LQ9H3M9 355 aa13.48□□□□□ -0.25
CCDC90B-216ENST00000529856 SMOC2Q9H3U7 446 aa13.48□□□□□ -0.25
CCDC90B-216ENST00000529856 CISHQ9NSE2 258 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms