RNA–Protein interactions for RNA: ENST00000529355.1

CTR9-204, Transcript of CTR9 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene CTR9, Length 1,146 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9-204ENST00000529355 ZNF518BQ9C0D4 1074 aa5.72□□□□□ -1.49
CTR9-204ENST00000529355 NUP62CLQ9H1M0 184 aa5.72□□□□□ -1.49
CTR9-204ENST00000529355 CHST8Q9H2A9 424 aa5.72□□□□□ -1.49
CTR9-204ENST00000529355 CXorf36Q9H7Y0 433 aa5.72□□□□□ -1.49
CTR9-204ENST00000529355 AFF4Q9UHB7 1163 aaKnown RBP5.72□□□□□ -1.49
CTR9-204ENST00000529355 NDRG4Q9ULP0 352 aaKnown RBP5.72□□□□□ -1.49
CTR9-204ENST00000529355 NEU2Q9Y3R4 380 aa5.72□□□□□ -1.49
CTR9-204ENST00000529355 H7C4K7 107 aa5.71□□□□□ -1.5
CTR9-204ENST00000529355 SRGNP10124 158 aa5.71□□□□□ -1.5
CTR9-204ENST00000529355 ADORA2AP29274 412 aa5.71□□□□□ -1.5
CTR9-204ENST00000529355 CD6P30203 668 aa5.71□□□□□ -1.5
CTR9-204ENST00000529355 ITGA8P53708 1063 aa5.71□□□□□ -1.5
CTR9-204ENST00000529355 MYO1EQ12965 1108 aa5.71□□□□□ -1.5
CTR9-204ENST00000529355 EIF2B5Q13144 721 aaKnown RBP5.71□□□□□ -1.5
CTR9-204ENST00000529355 RAB32Q13637 225 aa5.71□□□□□ -1.5
CTR9-204ENST00000529355 SYCP2LQ5T4T6 812 aa5.71□□□□□ -1.5
CTR9-204ENST00000529355 HECTD2Q5U5R9 776 aa5.71□□□□□ -1.5
CTR9-204ENST00000529355 PCSK4Q6UW60 755 aa5.71□□□□□ -1.5
CTR9-204ENST00000529355 Q6ZNX1 250 aa5.71□□□□□ -1.5
CTR9-204ENST00000529355 UNC13DQ70J99 1090 aa5.71□□□□□ -1.5
CTR9-204ENST00000529355 SUCLG2Q96I99 432 aa5.71□□□□□ -1.5
CTR9-204ENST00000529355 CYP4F11Q9HBI6 524 aa5.71□□□□□ -1.5
CTR9-204ENST00000529355 MAST3O60307 1309 aa5.71□□□□□ -1.5
CTR9-204ENST00000529355 SPATA31A3Q5VYP0 1347 aa5.71□□□□□ -1.5
CTR9-204ENST00000529355 ADGRA2Q96PE1 1338 aa5.71□□□□□ -1.5
CTR9-204ENST00000529355 ADM5C9JUS6 153 aa5.7□□□□□ -1.5
CTR9-204ENST00000529355 MGST3O14880 152 aa5.7□□□□□ -1.5
CTR9-204ENST00000529355 FOXN1O15353 648 aa5.7□□□□□ -1.5
CTR9-204ENST00000529355 YY2O15391 372 aa5.7□□□□□ -1.5
CTR9-204ENST00000529355 NCK2O43639 380 aa5.7□□□□□ -1.5
CTR9-204ENST00000529355 VNN1O95497 513 aa5.7□□□□□ -1.5
CTR9-204ENST00000529355 MYL1P05976 194 aa5.7□□□□□ -1.5
CTR9-204ENST00000529355 CSF1RP07333 972 aa5.7□□□□□ -1.5
CTR9-204ENST00000529355 ATXN1LP0C7T5 689 aaKnown RBP5.7□□□□□ -1.5
CTR9-204ENST00000529355 CASP5P51878 434 aa5.7□□□□□ -1.5
CTR9-204ENST00000529355 LY6KQ17RY6 165 aa5.7□□□□□ -1.5
CTR9-204ENST00000529355 RRAGBQ5VZM2 374 aa5.7□□□□□ -1.5
CTR9-204ENST00000529355 RGS7BPQ6MZT1 257 aaPredicted RBP5.7□□□□□ -1.5
CTR9-204ENST00000529355 LAYNQ6UX15 382 aa5.7□□□□□ -1.5
CTR9-204ENST00000529355 RNF152Q8N8N0 203 aa5.7□□□□□ -1.5
CTR9-204ENST00000529355 B3GALNT2Q8NCR0 500 aa5.7□□□□□ -1.5
CTR9-204ENST00000529355 TMEM171Q8WVE6 324 aa5.7□□□□□ -1.5
CTR9-204ENST00000529355 FAM136AQ96C01 138 aa5.7□□□□□ -1.5
CTR9-204ENST00000529355 PTDSS2Q9BVG9 487 aa5.7□□□□□ -1.5
CTR9-204ENST00000529355 IKZF4Q9H2S9 585 aa5.7□□□□□ -1.5
CTR9-204ENST00000529355 ALG13Q9NP73 1137 aaKnown RBP5.7□□□□□ -1.5
CTR9-204ENST00000529355 A1CFQ9NQ94 594 aaKnown RBP5.7□□□□□ -1.5
CTR9-204ENST00000529355 MID2Q9UJV3 735 aa5.7□□□□□ -1.5
CTR9-204ENST00000529355 PHTF1Q9UMS5 762 aa5.7□□□□□ -1.5
CTR9-204ENST00000529355 POM121BA6NF01 834 aa5.69□□□□□ -1.5
CTR9-204ENST00000529355 TRIAP1O43715 76 aa5.69□□□□□ -1.5
CTR9-204ENST00000529355 RASSF9O75901 435 aa5.69□□□□□ -1.5
CTR9-204ENST00000529355 KCNA3P22001 575 aa5.69□□□□□ -1.5
CTR9-204ENST00000529355 GDF5P43026 501 aa5.69□□□□□ -1.5
CTR9-204ENST00000529355 ALDH5A1P51649 535 aaPredicted RBP5.69□□□□□ -1.5
CTR9-204ENST00000529355 LOXL3P58215 753 aa5.69□□□□□ -1.5
CTR9-204ENST00000529355 LONRF1Q17RB8 773 aa5.69□□□□□ -1.5
CTR9-204ENST00000529355 MAVSQ7Z434 540 aa5.69□□□□□ -1.5
CTR9-204ENST00000529355 GAS2L3Q86XJ1 694 aa5.69□□□□□ -1.5
CTR9-204ENST00000529355 BPIFB1Q8TDL5 484 aa5.69□□□□□ -1.5
CTR9-204ENST00000529355 ATG4AQ8WYN0 398 aa5.69□□□□□ -1.5
CTR9-204ENST00000529355 CAVIN3Q969G5 261 aa5.69□□□□□ -1.5
CTR9-204ENST00000529355 PPP2R3CQ969Q6 453 aa5.69□□□□□ -1.5
CTR9-204ENST00000529355 FBXL20Q96IG2 436 aa5.69□□□□□ -1.5
CTR9-204ENST00000529355 OSBPL9Q96SU4 736 aa5.69□□□□□ -1.5
CTR9-204ENST00000529355 BTBD1Q9H0C5 482 aa5.69□□□□□ -1.5
CTR9-204ENST00000529355 TBC1D23Q9NUY8 699 aa5.69□□□□□ -1.5
CTR9-204ENST00000529355 ITGB1BP2Q9UKP3 347 aa5.69□□□□□ -1.5
CTR9-204ENST00000529355 WDR27A2RRH5 827 aa5.68□□□□□ -1.5
CTR9-204ENST00000529355 RAB27BO00194 218 aa5.68□□□□□ -1.5
CTR9-204ENST00000529355 PROM1O43490 865 aa5.68□□□□□ -1.5
CTR9-204ENST00000529355 PPFIA4O75335 1185 aa5.68□□□□□ -1.5
CTR9-204ENST00000529355 MT-ND5P03915 603 aa5.68□□□□□ -1.5
CTR9-204ENST00000529355 HKR1P10072 659 aa5.68□□□□□ -1.5
CTR9-204ENST00000529355 TSHRP16473 764 aa5.68□□□□□ -1.5
CTR9-204ENST00000529355 LIPAP38571 399 aa5.68□□□□□ -1.5
CTR9-204ENST00000529355 DGKEP52429 567 aa5.68□□□□□ -1.5
CTR9-204ENST00000529355 COL10A1Q03692 680 aa5.68□□□□□ -1.5
CTR9-204ENST00000529355 KRT17Q04695 432 aa5.68□□□□□ -1.5
CTR9-204ENST00000529355 TXNRD1Q16881 649 aa5.68□□□□□ -1.5
CTR9-204ENST00000529355 KIAA0895LQ68EN5 471 aa5.68□□□□□ -1.5
CTR9-204ENST00000529355 FCRL6Q6DN72 434 aa5.68□□□□□ -1.5
CTR9-204ENST00000529355 SPSB4Q96A44 273 aa5.68□□□□□ -1.5
CTR9-204ENST00000529355 SLC39A13Q96H72 371 aa5.68□□□□□ -1.5
CTR9-204ENST00000529355 MSLNLQ96KJ4 702 aa5.68□□□□□ -1.5
CTR9-204ENST00000529355 SNX22Q96L94 193 aa5.68□□□□□ -1.5
CTR9-204ENST00000529355 GBA2Q9HCG7 927 aaPredicted RBP5.68□□□□□ -1.5
CTR9-204ENST00000529355 CCDC194A0A1B0GVG4 234 aa5.67□□□□□ -1.5
CTR9-204ENST00000529355 ANO9A1A5B4 782 aa5.67□□□□□ -1.5
CTR9-204ENST00000529355 MBD3L4A6NDZ8 208 aaPredicted RBP5.67□□□□□ -1.5
CTR9-204ENST00000529355 MBD3L3A6NE82 208 aaPredicted RBP5.67□□□□□ -1.5
CTR9-204ENST00000529355 PEX1O43933 1283 aa5.67□□□□□ -1.5
CTR9-204ENST00000529355 ESRRBO95718 433 aa5.67□□□□□ -1.5
CTR9-204ENST00000529355 GCP02774 474 aa5.67□□□□□ -1.5
CTR9-204ENST00000529355 NBPF7P0C2Y1 421 aaPredicted RBP5.67□□□□□ -1.5
CTR9-204ENST00000529355 TXNP10599 105 aaKnown RBP5.67□□□□□ -1.5
CTR9-204ENST00000529355 PHKG2P15735 406 aa5.67□□□□□ -1.5
CTR9-204ENST00000529355 TGM1P22735 817 aa5.67□□□□□ -1.5
CTR9-204ENST00000529355 SERPINB3P29508 390 aa5.67□□□□□ -1.5
CTR9-204ENST00000529355 FOLR3P41439 243 aa5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms