RNA–Protein interactions for RNA: ENST00000528488.5

C11orf49-215, Transcript of chromosome 11 open reading frame 49, humanhuman

TSL 2

Gene C11orf49, Length 1,623 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf49-215ENST00000528488 CDR2Q01850 454 aa21.5■■□□□ 1.03
C11orf49-215ENST00000528488 ROR1Q01973 937 aa21.5■■□□□ 1.03
C11orf49-215ENST00000528488 CYP27A1Q02318 531 aa21.5■■□□□ 1.03
C11orf49-215ENST00000528488 MAPRE1Q15691 268 aaKnown RBP21.5■■□□□ 1.03
C11orf49-215ENST00000528488 GOLGA7BQ2TAP0 167 aa21.5■■□□□ 1.03
C11orf49-215ENST00000528488 ZNF677Q86XU0 584 aa21.5■■□□□ 1.03
C11orf49-215ENST00000528488 TMEM139Q8IV31 216 aa21.5■■□□□ 1.03
C11orf49-215ENST00000528488 FUKQ8N0W3 1084 aa21.5■■□□□ 1.03
C11orf49-215ENST00000528488 OLIG1Q8TAK6 271 aa21.5■■□□□ 1.03
C11orf49-215ENST00000528488 BAG1Q99933 345 aaPredicted RBP21.5■■□□□ 1.03
C11orf49-215ENST00000528488 SYT11Q9BT88 431 aa21.5■■□□□ 1.03
C11orf49-215ENST00000528488 MED10Q9BTT4 135 aa21.5■■□□□ 1.03
C11orf49-215ENST00000528488 ZNF576Q9H609 170 aa21.5■■□□□ 1.03
C11orf49-215ENST00000528488 NGRNQ9NPE2 291 aaKnown RBP21.5■■□□□ 1.03
C11orf49-215ENST00000528488 WDR3Q9UNX4 943 aaKnown RBP eCLIP21.5■■□□□ 1.03
C11orf49-215ENST00000528488 C2orf71A6NGG8 1288 aa21.49■■□□□ 1.03
C11orf49-215ENST00000528488 HIDE1A8MVS5 230 aa21.49■■□□□ 1.03
C11orf49-215ENST00000528488 TEX28O15482 410 aa21.49■■□□□ 1.03
C11orf49-215ENST00000528488 MICAL2O94851 1124 aa21.49■■□□□ 1.03
C11orf49-215ENST00000528488 CNPP09543 421 aaKnown RBP21.49■■□□□ 1.03
C11orf49-215ENST00000528488 FMO1Q01740 532 aa21.49■■□□□ 1.03
C11orf49-215ENST00000528488 CNGA2Q16280 664 aa21.49■■□□□ 1.03
C11orf49-215ENST00000528488 LRRC8AQ8IWT6 810 aa21.49■■□□□ 1.03
C11orf49-215ENST00000528488 MRPL43Q8N983 215 aaKnown RBP21.49■■□□□ 1.03
C11orf49-215ENST00000528488 PGLYRP2Q96PD5 576 aa21.49■■□□□ 1.03
C11orf49-215ENST00000528488 HNRNPABQ99729 332 aaKnown RBP21.49■■□□□ 1.03
C11orf49-215ENST00000528488 TSPAN16Q9UKR8 245 aa21.49■■□□□ 1.03
C11orf49-215ENST00000528488 IRAK3Q9Y616 596 aa21.49■■□□□ 1.03
C11orf49-215ENST00000528488 WDR27A2RRH5 827 aa21.48■■□□□ 1.03
C11orf49-215ENST00000528488 NDUFV1P49821 464 aa21.48■■□□□ 1.03
C11orf49-215ENST00000528488 GPR17Q13304 367 aa21.48■■□□□ 1.03
C11orf49-215ENST00000528488 STILQ15468 1287 aa21.48■■□□□ 1.03
C11orf49-215ENST00000528488 LCLAT1Q6UWP7 414 aa21.48■■□□□ 1.03
C11orf49-215ENST00000528488 CYP26C1Q6V0L0 522 aa21.48■■□□□ 1.03
C11orf49-215ENST00000528488 RNF19BQ6ZMZ0 732 aa21.48■■□□□ 1.03
C11orf49-215ENST00000528488 PAQR9Q6ZVX9 377 aa21.48■■□□□ 1.03
C11orf49-215ENST00000528488 FAM35AQ86V20 835 aa21.48■■□□□ 1.03
C11orf49-215ENST00000528488 SPATA2LQ8IUW3 424 aaPredicted RBP21.48■■□□□ 1.03
C11orf49-215ENST00000528488 PASD1Q8IV76 773 aa21.48■■□□□ 1.03
C11orf49-215ENST00000528488 KLHL5Q96PQ7 755 aa21.48■■□□□ 1.03
C11orf49-215ENST00000528488 RHOBTB2Q9BYZ6 727 aa21.48■■□□□ 1.03
C11orf49-215ENST00000528488 ZNF518BQ9C0D4 1074 aa21.48■■□□□ 1.03
C11orf49-215ENST00000528488 LMAN2LQ9H0V9 348 aa21.48■■□□□ 1.03
C11orf49-215ENST00000528488 PDCL3Q9H2J4 239 aa21.48■■□□□ 1.03
C11orf49-215ENST00000528488 NHEJ1Q9H9Q4 299 aaPredicted RBP21.48■■□□□ 1.03
C11orf49-215ENST00000528488 SEPT11Q9NVA2 429 aaKnown RBP21.48■■□□□ 1.03
C11orf49-215ENST00000528488 PCDHGC3Q9UN70 934 aa21.48■■□□□ 1.03
C11orf49-215ENST00000528488 PATJQ8NI35 1801 aa21.48■■□□□ 1.03
C11orf49-215ENST00000528488 M0QYV0 167 aa21.47■■□□□ 1.03
C11orf49-215ENST00000528488 SOX1O00570 391 aaPredicted RBP21.47■■□□□ 1.03
C11orf49-215ENST00000528488 LPXNO60711 386 aa21.47■■□□□ 1.03
C11orf49-215ENST00000528488 TNFAIP3P21580 790 aa21.47■■□□□ 1.03
C11orf49-215ENST00000528488 MAPK8IP2Q13387 824 aaPredicted RBP21.47■■□□□ 1.03
C11orf49-215ENST00000528488 NFE2Q16621 373 aaPredicted RBP21.47■■□□□ 1.03
C11orf49-215ENST00000528488 PDE12Q6L8Q7 609 aaKnown RBP21.47■■□□□ 1.03
C11orf49-215ENST00000528488 DENND1BQ6P3S1 775 aa21.47■■□□□ 1.03
C11orf49-215ENST00000528488 C4orf50Q6ZRC1 276 aa21.47■■□□□ 1.03
C11orf49-215ENST00000528488 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP21.47■■□□□ 1.03
C11orf49-215ENST00000528488 EMILIN2Q9BXX0 1053 aa21.47■■□□□ 1.03
C11orf49-215ENST00000528488 ABI2Q9NYB9 513 aaPredicted RBP21.47■■□□□ 1.03
C11orf49-215ENST00000528488 SSU72P8A0A1W2PR75 194 aa21.47■■□□□ 1.03
C11orf49-215ENST00000528488 MTMR11A4FU01 709 aa21.47■■□□□ 1.03
C11orf49-215ENST00000528488 SOWAHDA6NJG2 315 aa21.47■■□□□ 1.03
C11orf49-215ENST00000528488 VNN2O95498 520 aa21.47■■□□□ 1.03
C11orf49-215ENST00000528488 RAB33AQ14088 237 aa21.47■■□□□ 1.03
C11orf49-215ENST00000528488 TTC30AQ86WT1 665 aa21.47■■□□□ 1.03
C11orf49-215ENST00000528488 TMTC1Q8IUR5 882 aa21.47■■□□□ 1.03
C11orf49-215ENST00000528488 UBA3Q8TBC4 463 aa21.47■■□□□ 1.03
C11orf49-215ENST00000528488 PCDHB18PQ96TA0 734 aa21.47■■□□□ 1.03
C11orf49-215ENST00000528488 DEF6Q9H4E7 631 aa21.47■■□□□ 1.03
C11orf49-215ENST00000528488 KRT82Q9NSB4 513 aa21.47■■□□□ 1.03
C11orf49-215ENST00000528488 HESX1Q9UBX0 185 aa21.47■■□□□ 1.03
C11orf49-215ENST00000528488 PCDHB5Q9Y5E4 795 aa21.47■■□□□ 1.03
C11orf49-215ENST00000528488 ATP8B3O60423 1300 aa21.46■■□□□ 1.03
C11orf49-215ENST00000528488 DDX3XO00571 662 aaKnown RBP eCLIP21.46■■□□□ 1.039e-12■■■■□ 20.3
C11orf49-215ENST00000528488 BDNFP23560 247 aa21.46■■□□□ 1.03
C11orf49-215ENST00000528488 SMARCB1Q12824 385 aa21.46■■□□□ 1.03
C11orf49-215ENST00000528488 VPS36Q86VN1 386 aa21.46■■□□□ 1.03
C11orf49-215ENST00000528488 PALB2Q86YC2 1186 aa21.46■■□□□ 1.03
C11orf49-215ENST00000528488 ANKRD52Q8NB46 1076 aa21.46■■□□□ 1.03
C11orf49-215ENST00000528488 ATAD1Q8NBU5 361 aa21.46■■□□□ 1.03
C11orf49-215ENST00000528488 CCDC42Q96M95 316 aa21.46■■□□□ 1.03
C11orf49-215ENST00000528488 TRANK1O15050 2925 aa21.46■■□□□ 1.03
C11orf49-215ENST00000528488 TMEM265A0A087WTH1 108 aa21.45■■□□□ 1.02
C11orf49-215ENST00000528488 FAM170AA1A519 330 aa21.45■■□□□ 1.02
C11orf49-215ENST00000528488 AP1G2O75843 785 aa21.45■■□□□ 1.02
C11orf49-215ENST00000528488 ADH1AP07327 375 aa21.45■■□□□ 1.02
C11orf49-215ENST00000528488 CYP2F1P24903 491 aa21.45■■□□□ 1.02
C11orf49-215ENST00000528488 ASTE1Q2TB18 679 aaPredicted RBP21.45■■□□□ 1.02
C11orf49-215ENST00000528488 PKDCCQ504Y2 493 aa21.45■■□□□ 1.02
C11orf49-215ENST00000528488 TTC9BQ8N6N2 239 aa21.45■■□□□ 1.02
C11orf49-215ENST00000528488 CCDC112Q8NEF3 446 aa21.45■■□□□ 1.02
C11orf49-215ENST00000528488 ZNF461Q8TAF7 563 aa21.45■■□□□ 1.02
C11orf49-215ENST00000528488 SMARCD1Q96GM5 515 aa21.45■■□□□ 1.02
C11orf49-215ENST00000528488 FUBP3Q96I24 572 aaKnown RBP eCLIP21.45■■□□□ 1.02
C11orf49-215ENST00000528488 TTYH1Q9H313 450 aaPredicted RBP21.45■■□□□ 1.02
C11orf49-215ENST00000528488 AFF4Q9UHB7 1163 aaKnown RBP21.45■■□□□ 1.02
C11orf49-215ENST00000528488 ADAMTS1Q9UHI8 967 aa21.45■■□□□ 1.02
C11orf49-215ENST00000528488 ABLIM3O94929 683 aa21.44■■□□□ 1.02
C11orf49-215ENST00000528488 FAM200BP0CF97 657 aa21.44■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms