RNA–Protein interactions for RNA: ENST00000527887.1

CAPN1-212, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 348 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-212ENST00000527887 ATICP31939 592 aa15.2■□□□□ 0.02
CAPN1-212ENST00000527887 AP3M2P53677 418 aa15.2■□□□□ 0.02
CAPN1-212ENST00000527887 CYP4F8P98187 520 aa15.2■□□□□ 0.02
CAPN1-212ENST00000527887 AMPD2Q01433 879 aa15.2■□□□□ 0.02
CAPN1-212ENST00000527887 DNM1Q05193 864 aaKnown RBP15.2■□□□□ 0.02
CAPN1-212ENST00000527887 CYP24A1Q07973 514 aa15.2■□□□□ 0.02
CAPN1-212ENST00000527887 MTAPQ13126 283 aa15.2■□□□□ 0.02
CAPN1-212ENST00000527887 ZNF268Q14587 947 aaPredicted RBP15.2■□□□□ 0.02
CAPN1-212ENST00000527887 FOXD4L6Q3SYB3 417 aaPredicted RBP15.2■□□□□ 0.02
CAPN1-212ENST00000527887 FOXD4L3Q6VB84 417 aaPredicted RBP15.2■□□□□ 0.02
CAPN1-212ENST00000527887 TMEM150AQ86TG1 271 aa15.2■□□□□ 0.02
CAPN1-212ENST00000527887 RDH13Q8NBN7 331 aa15.2■□□□□ 0.02
CAPN1-212ENST00000527887 LRRC3BQ96PB8 259 aa15.2■□□□□ 0.02
CAPN1-212ENST00000527887 CGRRF1Q99675 332 aa15.2■□□□□ 0.02
CAPN1-212ENST00000527887 TDP1Q9NUW8 608 aa15.2■□□□□ 0.02
CAPN1-212ENST00000527887 MAGEC2Q9UBF1 373 aaPredicted RBP15.2■□□□□ 0.02
CAPN1-212ENST00000527887 SCN1AP35498 2009 aa15.2■□□□□ 0.02
CAPN1-212ENST00000527887 PTPRJQ12913 1337 aa15.19■□□□□ 0.02
CAPN1-212ENST00000527887 SPECC1L-ADORA2AF8WAN1 911 aa15.19■□□□□ 0.02
CAPN1-212ENST00000527887 LILRB5O75023 590 aa15.19■□□□□ 0.02
CAPN1-212ENST00000527887 PRAMEF12O95522 483 aa15.19■□□□□ 0.02
CAPN1-212ENST00000527887 DLATP10515 647 aaKnown RBP15.19■□□□□ 0.02
CAPN1-212ENST00000527887 PFKLP17858 780 aa15.19■□□□□ 0.02
CAPN1-212ENST00000527887 ACAT1P24752 427 aaKnown RBP15.19■□□□□ 0.02
CAPN1-212ENST00000527887 CTHP32929 405 aa15.19■□□□□ 0.02
CAPN1-212ENST00000527887 AFMP43652 599 aa15.19■□□□□ 0.02
CAPN1-212ENST00000527887 PDE6CP51160 858 aa15.19■□□□□ 0.02
CAPN1-212ENST00000527887 FOXK2Q01167 660 aa15.19■□□□□ 0.02
CAPN1-212ENST00000527887 CUL4BQ13620 913 aa15.19■□□□□ 0.02
CAPN1-212ENST00000527887 DDR2Q16832 855 aa15.19■□□□□ 0.02
CAPN1-212ENST00000527887 ITPRIPL2Q3MIP1 535 aa15.19■□□□□ 0.02
CAPN1-212ENST00000527887 LMBRD2Q68DH5 695 aaPredicted RBP15.19■□□□□ 0.02
CAPN1-212ENST00000527887 CLEC17AQ6ZS10 378 aa15.19■□□□□ 0.02
CAPN1-212ENST00000527887 OSTM1Q86WC4 334 aa15.19■□□□□ 0.02
CAPN1-212ENST00000527887 NELFCDQ8IXH7 590 aa15.19■□□□□ 0.02
CAPN1-212ENST00000527887 SPEM1Q8N4L4 309 aa15.19■□□□□ 0.02
CAPN1-212ENST00000527887 FSIP1Q8NA03 581 aa15.19■□□□□ 0.02
CAPN1-212ENST00000527887 KBTBD7Q8WVZ9 684 aa15.19■□□□□ 0.02
CAPN1-212ENST00000527887 EXOC4Q96A65 974 aa15.19■□□□□ 0.02
CAPN1-212ENST00000527887 SPATA17Q96L03 361 aa15.19■□□□□ 0.02
CAPN1-212ENST00000527887 MMS19Q96T76 1030 aa15.19■□□□□ 0.02
CAPN1-212ENST00000527887 SYT15Q9BQS2 421 aa15.19■□□□□ 0.02
CAPN1-212ENST00000527887 BLZF1Q9H2G9 400 aa15.19■□□□□ 0.02
CAPN1-212ENST00000527887 SLC39A2Q9NP94 309 aa15.19■□□□□ 0.02
CAPN1-212ENST00000527887 ANK1P16157 1881 aa15.18■□□□□ 0.02
CAPN1-212ENST00000527887 EP300Q09472 2414 aaPredicted RBP15.18■□□□□ 0.02
CAPN1-212ENST00000527887 SLC38A8A6NNN8 435 aa15.18■□□□□ 0.02
CAPN1-212ENST00000527887 CLIC2O15247 247 aa15.18■□□□□ 0.02
CAPN1-212ENST00000527887 EXOC3O60645 756 aa15.18■□□□□ 0.02
CAPN1-212ENST00000527887 PAPSS2O95340 614 aaPredicted RBP15.18■□□□□ 0.02
CAPN1-212ENST00000527887 CST3P01034 146 aaPredicted RBP15.18■□□□□ 0.02
CAPN1-212ENST00000527887 GNL1P36915 607 aaPredicted RBP15.18■□□□□ 0.02
CAPN1-212ENST00000527887 CXCL12P48061 93 aa15.18■□□□□ 0.02
CAPN1-212ENST00000527887 CYP2J2P51589 502 aa15.18■□□□□ 0.02
CAPN1-212ENST00000527887 TRPC3Q13507 836 aa15.18■□□□□ 0.02
CAPN1-212ENST00000527887 SLC9A9Q8IVB4 645 aa15.18■□□□□ 0.02
CAPN1-212ENST00000527887 GPR161Q8N6U8 529 aaKnown RBP15.18■□□□□ 0.02
CAPN1-212ENST00000527887 MAB21L3Q8N8X9 362 aa15.18■□□□□ 0.02
CAPN1-212ENST00000527887 SUMF1Q8NBK3 374 aa15.18■□□□□ 0.02
CAPN1-212ENST00000527887 SECISBP2LQ93073 1101 aaKnown RBP15.18■□□□□ 0.02
CAPN1-212ENST00000527887 SYAP1Q96A49 352 aaPredicted RBP15.18■□□□□ 0.02
CAPN1-212ENST00000527887 FAM83CQ9BQN1 747 aa15.18■□□□□ 0.02
CAPN1-212ENST00000527887 SNX25Q9H3E2 840 aa15.18■□□□□ 0.02
CAPN1-212ENST00000527887 GKN1Q9NS71 199 aa15.18■□□□□ 0.02
CAPN1-212ENST00000527887 MAGED2Q9UNF1 606 aaPredicted RBP15.18■□□□□ 0.02
CAPN1-212ENST00000527887 ATP6V1DQ9Y5K8 247 aa15.18■□□□□ 0.02
CAPN1-212ENST00000527887 CACNA1IQ9P0X4 2223 aa15.18■□□□□ 0.02
CAPN1-212ENST00000527887 TSC2P49815 1807 aa15.17■□□□□ 0.02
CAPN1-212ENST00000527887 KIF20AO95235 890 aa15.17■□□□□ 0.02
CAPN1-212ENST00000527887 LMO2P25791 158 aa15.17■□□□□ 0.02
CAPN1-212ENST00000527887 PPP3CCP48454 512 aa15.17■□□□□ 0.02
CAPN1-212ENST00000527887 TNNC1P63316 161 aa15.17■□□□□ 0.02
CAPN1-212ENST00000527887 KRT85P78386 507 aa15.17■□□□□ 0.02
CAPN1-212ENST00000527887 PKP1Q13835 747 aa15.17■□□□□ 0.02
CAPN1-212ENST00000527887 PDGFRLQ15198 375 aa15.17■□□□□ 0.02
CAPN1-212ENST00000527887 TXNDC8Q6A555 127 aa15.17■□□□□ 0.02
CAPN1-212ENST00000527887 SCARA3Q6AZY7 606 aa15.17■□□□□ 0.02
CAPN1-212ENST00000527887 CC2D1AQ6P1N0 951 aaPredicted RBP15.17■□□□□ 0.02
CAPN1-212ENST00000527887 SCN4BQ8IWT1 228 aa15.17■□□□□ 0.02
CAPN1-212ENST00000527887 KIAA1958Q8N8K9 716 aa15.17■□□□□ 0.02
CAPN1-212ENST00000527887 MYCBPAPQ8TBZ2 947 aa15.17■□□□□ 0.02
CAPN1-212ENST00000527887 USP13Q92995 863 aaPredicted RBP15.17■□□□□ 0.02
CAPN1-212ENST00000527887 CCDC127Q96BQ5 260 aa15.17■□□□□ 0.02
CAPN1-212ENST00000527887 PAGE5Q96GU1 130 aa15.17■□□□□ 0.02
CAPN1-212ENST00000527887 EPC1Q9H2F5 836 aa15.17■□□□□ 0.02
CAPN1-212ENST00000527887 VRTNQ9H8Y1 702 aa15.17■□□□□ 0.02
CAPN1-212ENST00000527887 EXOC1Q9NV70 894 aa15.17■□□□□ 0.02
CAPN1-212ENST00000527887 GTSE1Q9NYZ3 720 aa15.17■□□□□ 0.02
CAPN1-212ENST00000527887 SERTAD1Q9UHV2 236 aa15.17■□□□□ 0.02
CAPN1-212ENST00000527887 SPTBN4Q9H254 2564 aa15.17■□□□□ 0.02
CAPN1-212ENST00000527887 TRAV19A0A0A6YYK7 116 aa15.16■□□□□ 0.02
CAPN1-212ENST00000527887 PDXKO00764 312 aa15.16■□□□□ 0.02
CAPN1-212ENST00000527887 TRIM66O15016 1216 aa15.16■□□□□ 0.02
CAPN1-212ENST00000527887 ACTN4O43707 911 aaKnown RBP15.16■□□□□ 0.02
CAPN1-212ENST00000527887 KLRC4O43908 158 aa15.16■□□□□ 0.02
CAPN1-212ENST00000527887 USP17L7P0C7H9 530 aa15.16■□□□□ 0.02
CAPN1-212ENST00000527887 TDGF1P13385 188 aa15.16■□□□□ 0.02
CAPN1-212ENST00000527887 TCF3P15923 654 aa15.16■□□□□ 0.02
CAPN1-212ENST00000527887 ANXA13P27216 316 aa15.16■□□□□ 0.02
CAPN1-212ENST00000527887 CASP1P29466 404 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms