RNA–Protein interactions for RNA: ENST00000527299.1

CLNS1A-209, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 2

Gene CLNS1A, Length 387 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-209ENST00000527299 CCDC192P0DO97 292 aa4.02□□□□□ -1.77
CLNS1A-209ENST00000527299 HSPA8P11142 646 aaKnown RBP4.02□□□□□ -1.77
CLNS1A-209ENST00000527299 ERCC5P28715 1186 aaPredicted RBP4.02□□□□□ -1.77
CLNS1A-209ENST00000527299 PRKAR2BP31323 418 aa4.02□□□□□ -1.77
CLNS1A-209ENST00000527299 MLH1P40692 756 aa4.02□□□□□ -1.77
CLNS1A-209ENST00000527299 CTCFP49711 727 aaPredicted RBP4.02□□□□□ -1.77
CLNS1A-209ENST00000527299 PTTG1IPP53801 180 aa4.02□□□□□ -1.77
CLNS1A-209ENST00000527299 PMS2P54278 862 aa4.02□□□□□ -1.77
CLNS1A-209ENST00000527299 NPEPPSP55786 919 aa4.02□□□□□ -1.77
CLNS1A-209ENST00000527299 GSDMDP57764 484 aa4.02□□□□□ -1.77
CLNS1A-209ENST00000527299 CDK17Q00537 523 aa4.02□□□□□ -1.77
CLNS1A-209ENST00000527299 GUCY1B3Q02153 619 aa4.02□□□□□ -1.77
CLNS1A-209ENST00000527299 ITIH3Q06033 890 aa4.02□□□□□ -1.77
CLNS1A-209ENST00000527299 COX10Q12887 443 aa4.02□□□□□ -1.77
CLNS1A-209ENST00000527299 PPFIA1Q13136 1202 aa4.02□□□□□ -1.77
CLNS1A-209ENST00000527299 RIPK1Q13546 671 aa4.02□□□□□ -1.77
CLNS1A-209ENST00000527299 BYSLQ13895 437 aaKnown RBP4.02□□□□□ -1.77
CLNS1A-209ENST00000527299 RASA2Q15283 850 aa4.02□□□□□ -1.77
CLNS1A-209ENST00000527299 WHAMMP3Q1A5X7 153 aa4.02□□□□□ -1.77
CLNS1A-209ENST00000527299 TRIM71Q2Q1W2 868 aaKnown RBP4.02□□□□□ -1.77
CLNS1A-209ENST00000527299 MUM1Q2TAK8 710 aa4.02□□□□□ -1.77
CLNS1A-209ENST00000527299 CCDC144BQ3MJ40 725 aa4.02□□□□□ -1.77
CLNS1A-209ENST00000527299 CCDC153Q494R4 210 aa4.02□□□□□ -1.77
CLNS1A-209ENST00000527299 CFAP157Q5JU67 520 aa4.02□□□□□ -1.77
CLNS1A-209ENST00000527299 FAM209AQ5JX71 171 aa4.02□□□□□ -1.77
CLNS1A-209ENST00000527299 METTL24Q5JXM2 366 aa4.02□□□□□ -1.77
CLNS1A-209ENST00000527299 FOXB2Q5VYV0 432 aa4.02□□□□□ -1.77
CLNS1A-209ENST00000527299 NEPROQ6NW34 567 aa4.02□□□□□ -1.77
CLNS1A-209ENST00000527299 CCDC62Q6P9F0 684 aa4.02□□□□□ -1.77
CLNS1A-209ENST00000527299 CYB5D1Q6P9G0 228 aa4.02□□□□□ -1.77
CLNS1A-209ENST00000527299 SARM1Q6SZW1 724 aa4.02□□□□□ -1.77
CLNS1A-209ENST00000527299 CCBE1Q6UXH8 406 aaPredicted RBP4.02□□□□□ -1.77
CLNS1A-209ENST00000527299 OVCH1Q7RTY7 1134 aa4.02□□□□□ -1.77
CLNS1A-209ENST00000527299 C11orf74Q86VG3 221 aa4.02□□□□□ -1.77
CLNS1A-209ENST00000527299 FAM228AQ86W67 206 aa4.02□□□□□ -1.77
CLNS1A-209ENST00000527299 LRRC8AQ8IWT6 810 aa4.02□□□□□ -1.77
CLNS1A-209ENST00000527299 ESX1Q8N693 406 aa4.02□□□□□ -1.77
CLNS1A-209ENST00000527299 NSUN7Q8NE18 718 aaKnown RBP4.02□□□□□ -1.77
CLNS1A-209ENST00000527299 RASSF8Q8NHQ8 419 aa4.02□□□□□ -1.77
CLNS1A-209ENST00000527299 GDAP1Q8TB36 358 aa4.02□□□□□ -1.77
CLNS1A-209ENST00000527299 DEPTORQ8TB45 409 aa4.02□□□□□ -1.77
CLNS1A-209ENST00000527299 NELL1Q92832 810 aa4.02□□□□□ -1.77
CLNS1A-209ENST00000527299 ATP6V0A1Q93050 837 aa4.02□□□□□ -1.77
CLNS1A-209ENST00000527299 RNPC3Q96LT9 517 aaKnown RBP4.02□□□□□ -1.77
CLNS1A-209ENST00000527299 WDR92Q96MX6 357 aa4.02□□□□□ -1.77
CLNS1A-209ENST00000527299 TRAPPC9Q96Q05 1148 aa4.02□□□□□ -1.77
CLNS1A-209ENST00000527299 NR1H4Q96RI1 486 aaPredicted RBP4.02□□□□□ -1.77
CLNS1A-209ENST00000527299 CTAGE1Q96RT6 745 aa4.02□□□□□ -1.77
CLNS1A-209ENST00000527299 MAP3K14Q99558 947 aa4.02□□□□□ -1.77
CLNS1A-209ENST00000527299 CDC6Q99741 560 aa4.02□□□□□ -1.77
CLNS1A-209ENST00000527299 CELF4Q9BZC1 486 aaKnown RBP4.02□□□□□ -1.77
CLNS1A-209ENST00000527299 WDR11Q9BZH6 1224 aa4.02□□□□□ -1.77
CLNS1A-209ENST00000527299 KCNH6Q9H252 994 aa4.02□□□□□ -1.77
CLNS1A-209ENST00000527299 FAM204AQ9H8W3 233 aa4.02□□□□□ -1.77
CLNS1A-209ENST00000527299 CLK4Q9HAZ1 481 aaKnown RBP4.02□□□□□ -1.77
CLNS1A-209ENST00000527299 AS3MTQ9HBK9 375 aa4.02□□□□□ -1.77
CLNS1A-209ENST00000527299 DMAP1Q9NPF5 467 aaPredicted RBP4.02□□□□□ -1.77
CLNS1A-209ENST00000527299 DCAF16Q9NXF7 216 aa4.02□□□□□ -1.77
CLNS1A-209ENST00000527299 IL20Q9NYY1 176 aa4.02□□□□□ -1.77
CLNS1A-209ENST00000527299 CFAP45Q9UL16 551 aa4.02□□□□□ -1.77
CLNS1A-209ENST00000527299 L1RE1Q9UN81 338 aa4.02□□□□□ -1.77
CLNS1A-209ENST00000527299 WDR3Q9UNX4 943 aaKnown RBP eCLIP4.02□□□□□ -1.77
CLNS1A-209ENST00000527299 NOSIPQ9Y314 301 aaKnown RBP4.02□□□□□ -1.77
CLNS1A-209ENST00000527299 LUC7L2Q9Y383 392 aaKnown RBP4.02□□□□□ -1.77
CLNS1A-209ENST00000527299 TIMM22Q9Y584 194 aa4.02□□□□□ -1.77
CLNS1A-209ENST00000527299 EPN1Q9Y6I3 576 aaPredicted RBP4.02□□□□□ -1.77
CLNS1A-209ENST00000527299 SQORQ9Y6N5 450 aa4.02□□□□□ -1.77
CLNS1A-209ENST00000527299 GRIN2AQ12879 1464 aa4.02□□□□□ -1.77
CLNS1A-209ENST00000527299 SHANK2Q9UPX8 1470 aa4.02□□□□□ -1.77
CLNS1A-209ENST00000527299 GCC2Q8IWJ2 1684 aa4.02□□□□□ -1.77
CLNS1A-209ENST00000527299 LAMC1P11047 1609 aa4.02□□□□□ -1.77
CLNS1A-209ENST00000527299 KIF14Q15058 1648 aa4.02□□□□□ -1.77
CLNS1A-209ENST00000527299 MSH6P52701 1360 aa4.02□□□□□ -1.77
CLNS1A-209ENST00000527299 CUX1P39880 1505 aa4.01□□□□□ -1.77
CLNS1A-209ENST00000527299 CDHR2Q9BYE9 1310 aa4.01□□□□□ -1.77
CLNS1A-209ENST00000527299 ITSN2Q9NZM3 1697 aa4.01□□□□□ -1.77
CLNS1A-209ENST00000527299 TEX14Q8IWB6 1497 aa4.01□□□□□ -1.77
CLNS1A-209ENST00000527299 A0A1B0GVG6 124 aa4.01□□□□□ -1.77
CLNS1A-209ENST00000527299 LRRD1A4D1F6 860 aa4.01□□□□□ -1.77
CLNS1A-209ENST00000527299 HTR3EA5X5Y0 456 aa4.01□□□□□ -1.77
CLNS1A-209ENST00000527299 USP27XA6NNY8 438 aa4.01□□□□□ -1.77
CLNS1A-209ENST00000527299 EIF3HO15372 352 aaKnown RBP eCLIP4.01□□□□□ -1.77
CLNS1A-209ENST00000527299 PRC1O43663 620 aa4.01□□□□□ -1.77
CLNS1A-209ENST00000527299 DIAPH2O60879 1101 aa4.01□□□□□ -1.77
CLNS1A-209ENST00000527299 DNAJC8O75937 253 aaPredicted RBP4.01□□□□□ -1.77
CLNS1A-209ENST00000527299 PRPF6O94906 941 aaKnown RBP4.01□□□□□ -1.77
CLNS1A-209ENST00000527299 RAPGEF3O95398 923 aa4.01□□□□□ -1.77
CLNS1A-209ENST00000527299 LDHAP00338 332 aaKnown RBP4.01□□□□□ -1.77
CLNS1A-209ENST00000527299 ALDH2P05091 517 aa4.01□□□□□ -1.77
CLNS1A-209ENST00000527299 ZBTB48P10074 688 aaPredicted RBP4.01□□□□□ -1.77
CLNS1A-209ENST00000527299 S100A1P23297 94 aa4.01□□□□□ -1.77
CLNS1A-209ENST00000527299 KIR2DL3P43628 341 aa4.01□□□□□ -1.77
CLNS1A-209ENST00000527299 AVPR1BP47901 424 aa4.01□□□□□ -1.77
CLNS1A-209ENST00000527299 MCM2P49736 904 aa4.01□□□□□ -1.77
CLNS1A-209ENST00000527299 PEX5P50542 639 aa4.01□□□□□ -1.77
CLNS1A-209ENST00000527299 CCNG1P51959 295 aa4.01□□□□□ -1.77
CLNS1A-209ENST00000527299 TUBA4AP68366 448 aa4.01□□□□□ -1.77
CLNS1A-209ENST00000527299 FAM189BP81408 668 aa4.01□□□□□ -1.77
CLNS1A-209ENST00000527299 MRPS35P82673 323 aaKnown RBP4.01□□□□□ -1.77
CLNS1A-209ENST00000527299 CCZ1BP86790 482 aa4.01□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms