RNA–Protein interactions for RNA: ENST00000526299.5

ECHDC1-219, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 534 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-219ENST00000526299 ADAMTS5Q9UNA0 930 aa3.64□□□□□ -1.83
ECHDC1-219ENST00000526299 NT5C1B-RDH14C9J2C7 533 aa3.63□□□□□ -1.83
ECHDC1-219ENST00000526299 K7ESF4 209 aa3.63□□□□□ -1.83
ECHDC1-219ENST00000526299 FESP07332 822 aa3.63□□□□□ -1.83
ECHDC1-219ENST00000526299 RBMS2Q15434 407 aaKnown RBP3.63□□□□□ -1.83
ECHDC1-219ENST00000526299 KRTAP27-1Q3LI81 207 aa3.63□□□□□ -1.83
ECHDC1-219ENST00000526299 TBC1D25Q3MII6 688 aa3.63□□□□□ -1.83
ECHDC1-219ENST00000526299 FCRL6Q6DN72 434 aa3.63□□□□□ -1.83
ECHDC1-219ENST00000526299 SFRP4Q6FHJ7 346 aaPredicted RBP3.63□□□□□ -1.83
ECHDC1-219ENST00000526299 ZBTB8BQ8NAP8 495 aaPredicted RBP3.63□□□□□ -1.83
ECHDC1-219ENST00000526299 COQ8BQ96D53 544 aa3.63□□□□□ -1.83
ECHDC1-219ENST00000526299 DAZAP1Q96EP5 407 aaKnown RBP3.63□□□□□ -1.83
ECHDC1-219ENST00000526299 FAXDC2Q96IV6 333 aa3.63□□□□□ -1.83
ECHDC1-219ENST00000526299 FSD1LQ9BXM9 530 aa3.63□□□□□ -1.83
ECHDC1-219ENST00000526299 TINAGL1Q9GZM7 467 aaPredicted RBP3.63□□□□□ -1.83
ECHDC1-219ENST00000526299 ZNF112Q9UJU3 913 aa3.63□□□□□ -1.83
ECHDC1-219ENST00000526299 SCAF8Q9UPN6 1271 aaKnown RBP3.63□□□□□ -1.83
ECHDC1-219ENST00000526299 PCDHA3Q9Y5H8 950 aa3.63□□□□□ -1.83
ECHDC1-219ENST00000526299 PHLDB1Q86UU1 1377 aa3.63□□□□□ -1.83
ECHDC1-219ENST00000526299 LY6G6EA0A0G2JKS1 128 aa3.62□□□□□ -1.83
ECHDC1-219ENST00000526299 LRRC14BA6NHZ5 514 aa3.62□□□□□ -1.83
ECHDC1-219ENST00000526299 CD8B2A6NJW9 211 aa3.62□□□□□ -1.83
ECHDC1-219ENST00000526299 FCHO1O14526 889 aa3.62□□□□□ -1.83
ECHDC1-219ENST00000526299 XPOTO43592 962 aaKnown RBP3.62□□□□□ -1.83
ECHDC1-219ENST00000526299 EXOC3O60645 756 aa3.62□□□□□ -1.83
ECHDC1-219ENST00000526299 PDE8BO95263 885 aa3.62□□□□□ -1.83
ECHDC1-219ENST00000526299 MT-CO1P00395 513 aa3.62□□□□□ -1.83
ECHDC1-219ENST00000526299 NPSP0C0P6 89 aa3.62□□□□□ -1.83
ECHDC1-219ENST00000526299 TMEM191BP0C7N4 346 aa3.62□□□□□ -1.83
ECHDC1-219ENST00000526299 RARBP10826 455 aa3.62□□□□□ -1.83
ECHDC1-219ENST00000526299 PRF1P14222 555 aa3.62□□□□□ -1.83
ECHDC1-219ENST00000526299 KCNJ5P48544 419 aa3.62□□□□□ -1.83
ECHDC1-219ENST00000526299 PIK3CGP48736 1102 aa3.62□□□□□ -1.83
ECHDC1-219ENST00000526299 HTR6P50406 440 aa3.62□□□□□ -1.83
ECHDC1-219ENST00000526299 HTRA4P83105 476 aaPredicted RBP3.62□□□□□ -1.83
ECHDC1-219ENST00000526299 DSC2Q02487 901 aa3.62□□□□□ -1.83
ECHDC1-219ENST00000526299 KIF22Q14807 665 aa3.62□□□□□ -1.83
ECHDC1-219ENST00000526299 LAYNQ6UX15 382 aa3.62□□□□□ -1.83
ECHDC1-219ENST00000526299 CNTD1Q8N815 330 aa3.62□□□□□ -1.83
ECHDC1-219ENST00000526299 FAM46DQ8NEK8 389 aa3.62□□□□□ -1.83
ECHDC1-219ENST00000526299 C1orf162Q8NEQ5 155 aaPredicted RBP3.62□□□□□ -1.83
ECHDC1-219ENST00000526299 NSUN6Q8TEA1 469 aaKnown RBP3.62□□□□□ -1.83
ECHDC1-219ENST00000526299 XAGE5Q8WWM1 108 aa3.62□□□□□ -1.83
ECHDC1-219ENST00000526299 TNPO1Q92973 898 aaKnown RBP3.62□□□□□ -1.83
ECHDC1-219ENST00000526299 PROCRQ9UNN8 238 aa3.62□□□□□ -1.83
ECHDC1-219ENST00000526299 TBX22Q9Y458 520 aa3.62□□□□□ -1.83
ECHDC1-219ENST00000526299 A1L4Q6 167 aa3.61□□□□□ -1.83
ECHDC1-219ENST00000526299 POC1B-GALNT4F8VUJ3 575 aa3.61□□□□□ -1.83
ECHDC1-219ENST00000526299 M0QYG6 137 aa3.61□□□□□ -1.83
ECHDC1-219ENST00000526299 PCDHGA12O60330 932 aa3.61□□□□□ -1.83
ECHDC1-219ENST00000526299 ABLIM3O94929 683 aa3.61□□□□□ -1.83
ECHDC1-219ENST00000526299 OAZ2O95190 189 aa3.61□□□□□ -1.83
ECHDC1-219ENST00000526299 CYP2A6P11509 494 aaPredicted RBP3.61□□□□□ -1.83
ECHDC1-219ENST00000526299 PRDX5P30044 214 aa3.61□□□□□ -1.83
ECHDC1-219ENST00000526299 IARSP41252 1262 aaKnown RBP3.61□□□□□ -1.83
ECHDC1-219ENST00000526299 GPSM2P81274 684 aa3.61□□□□□ -1.83
ECHDC1-219ENST00000526299 GTF2H3Q13889 308 aa3.61□□□□□ -1.83
ECHDC1-219ENST00000526299 ERV3-1Q14264 604 aa3.61□□□□□ -1.83
ECHDC1-219ENST00000526299 INAVAQ3KP66 663 aa3.61□□□□□ -1.83
ECHDC1-219ENST00000526299 UAP1L1Q3KQV9 507 aa3.61□□□□□ -1.83
ECHDC1-219ENST00000526299 LEXMQ3ZCV2 418 aa3.61□□□□□ -1.83
ECHDC1-219ENST00000526299 CERKLQ49MI3 558 aaPredicted RBP3.61□□□□□ -1.83
ECHDC1-219ENST00000526299 FAM160B1Q5W0V3 765 aa3.61□□□□□ -1.83
ECHDC1-219ENST00000526299 KRTAP5-1Q6L8H4 278 aa3.61□□□□□ -1.83
ECHDC1-219ENST00000526299 SERPINA13PQ6UXR4 307 aa3.61□□□□□ -1.83
ECHDC1-219ENST00000526299 USP43Q70EL4 1123 aa3.61□□□□□ -1.83
ECHDC1-219ENST00000526299 PPP1R32Q7Z5V6 425 aa3.61□□□□□ -1.83
ECHDC1-219ENST00000526299 KRT78Q8N1N4 520 aa3.61□□□□□ -1.83
ECHDC1-219ENST00000526299 GALNT4Q8N4A0 578 aa3.61□□□□□ -1.83
ECHDC1-219ENST00000526299 C3orf20Q8ND61 904 aa3.61□□□□□ -1.83
ECHDC1-219ENST00000526299 GLG1Q92896 1179 aa3.61□□□□□ -1.83
ECHDC1-219ENST00000526299 LYZL4Q96KX0 146 aa3.61□□□□□ -1.83
ECHDC1-219ENST00000526299 SLC46A1Q96NT5 459 aa3.61□□□□□ -1.83
ECHDC1-219ENST00000526299 FAM118BQ9BPY3 351 aa3.61□□□□□ -1.83
ECHDC1-219ENST00000526299 TTYH3Q9C0H2 523 aa3.61□□□□□ -1.83
ECHDC1-219ENST00000526299 FOXP1Q9H334 677 aaPredicted RBP3.61□□□□□ -1.83
ECHDC1-219ENST00000526299 SLC5A4Q9NY91 659 aa3.61□□□□□ -1.83
ECHDC1-219ENST00000526299 SH2B3Q9UQQ2 575 aa3.61□□□□□ -1.83
ECHDC1-219ENST00000526299 PCDHGA9Q9Y5G4 932 aaKnown RBP3.61□□□□□ -1.83
ECHDC1-219ENST00000526299 PCDHGA8Q9Y5G5 932 aa3.61□□□□□ -1.83
ECHDC1-219ENST00000526299 PCDHGA7Q9Y5G6 932 aa3.61□□□□□ -1.83
ECHDC1-219ENST00000526299 PCDHGA6Q9Y5G7 932 aa3.61□□□□□ -1.83
ECHDC1-219ENST00000526299 PCDHGA3Q9Y5H0 932 aa3.61□□□□□ -1.83
ECHDC1-219ENST00000526299 CFAP20Q9Y6A4 193 aaKnown RBP3.61□□□□□ -1.83
ECHDC1-219ENST00000526299 DSCR3O14972 297 aa3.6□□□□□ -1.83
ECHDC1-219ENST00000526299 GNAI2P04899 355 aa3.6□□□□□ -1.83
ECHDC1-219ENST00000526299 HOXD9P28356 352 aaPredicted RBP3.6□□□□□ -1.83
ECHDC1-219ENST00000526299 TCF15Q12870 199 aa3.6□□□□□ -1.83
ECHDC1-219ENST00000526299 SEMA3AQ14563 771 aa3.6□□□□□ -1.83
ECHDC1-219ENST00000526299 TWIST1Q15672 202 aa3.6□□□□□ -1.83
ECHDC1-219ENST00000526299 L1TD1Q5T7N2 865 aaKnown RBP3.6□□□□□ -1.83
ECHDC1-219ENST00000526299 ARHGAP40Q5TG30 622 aa3.6□□□□□ -1.83
ECHDC1-219ENST00000526299 C9orf47Q6ZRZ4 202 aa3.6□□□□□ -1.83
ECHDC1-219ENST00000526299 Q6ZTC4 211 aa3.6□□□□□ -1.83
ECHDC1-219ENST00000526299 Q6ZWC4 215 aa3.6□□□□□ -1.83
ECHDC1-219ENST00000526299 KRT26Q7Z3Y9 468 aa3.6□□□□□ -1.83
ECHDC1-219ENST00000526299 NOP9Q86U38 636 aaKnown RBP3.6□□□□□ -1.83
ECHDC1-219ENST00000526299 FAM90A1Q86YD7 464 aa3.6□□□□□ -1.83
ECHDC1-219ENST00000526299 TERB1Q8NA31 727 aa3.6□□□□□ -1.83
ECHDC1-219ENST00000526299 ABHD11Q8NFV4 315 aa3.6□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms