RNA–Protein interactions for RNA: ENST00000525435.1

CCS-202, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 2

Gene CCS, Length 798 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-202ENST00000525435 HNRNPABQ99729 332 aaKnown RBP13.17□□□□□ -0.3
CCS-202ENST00000525435 ELOVL4Q9GZR5 314 aa13.17□□□□□ -0.3
CCS-202ENST00000525435 VPS16Q9H269 839 aa13.17□□□□□ -0.3
CCS-202ENST00000525435 WDR6Q9NNW5 1121 aaKnown RBP13.17□□□□□ -0.3
CCS-202ENST00000525435 UBE2TQ9NPD8 197 aaPredicted RBP13.17□□□□□ -0.3
CCS-202ENST00000525435 PLCB1Q9NQ66 1216 aa13.17□□□□□ -0.3
CCS-202ENST00000525435 ABI2Q9NYB9 513 aaPredicted RBP13.17□□□□□ -0.3
CCS-202ENST00000525435 TAB2Q9NYJ8 693 aa13.17□□□□□ -0.3
CCS-202ENST00000525435 USTQ9Y2C2 406 aa13.17□□□□□ -0.3
CCS-202ENST00000525435 CUL9Q8IWT3 2517 aa13.17□□□□□ -0.3
CCS-202ENST00000525435 HCRTO43612 131 aa13.16□□□□□ -0.3
CCS-202ENST00000525435 FGF19O95750 216 aa13.16□□□□□ -0.3
CCS-202ENST00000525435 ATP1A3P13637 1013 aa13.16□□□□□ -0.3
CCS-202ENST00000525435 CD58P19256 250 aa13.16□□□□□ -0.3
CCS-202ENST00000525435 ACO1P21399 889 aaKnown RBP13.16□□□□□ -0.3
CCS-202ENST00000525435 CYP2F1P24903 491 aa13.16□□□□□ -0.3
CCS-202ENST00000525435 RAD23BP54727 409 aa13.16□□□□□ -0.3
CCS-202ENST00000525435 PSMC1P62191 440 aaKnown RBP13.16□□□□□ -0.3
CCS-202ENST00000525435 KCNMA1Q12791 1236 aa13.16□□□□□ -0.3
CCS-202ENST00000525435 TWF1Q12792 350 aa13.16□□□□□ -0.3
CCS-202ENST00000525435 VEPH1Q14D04 833 aa13.16□□□□□ -0.3
CCS-202ENST00000525435 FILIP1LQ4L180 1135 aa13.16□□□□□ -0.3
CCS-202ENST00000525435 MDH1BQ5I0G3 518 aa13.16□□□□□ -0.3
CCS-202ENST00000525435 RRAGAQ7L523 313 aa13.16□□□□□ -0.3
CCS-202ENST00000525435 LUZP1Q86V48 1076 aa13.16□□□□□ -0.3
CCS-202ENST00000525435 PSMG2Q969U7 264 aa13.16□□□□□ -0.3
CCS-202ENST00000525435 MYLPFQ96A32 169 aa13.16□□□□□ -0.3
CCS-202ENST00000525435 SPATA17Q96L03 361 aa13.16□□□□□ -0.3
CCS-202ENST00000525435 C8orf48Q96LL4 319 aa13.16□□□□□ -0.3
CCS-202ENST00000525435 HEXIM2Q96MH2 286 aaKnown RBP13.16□□□□□ -0.3
CCS-202ENST00000525435 ERGIC2Q96RQ1 377 aa13.16□□□□□ -0.3
CCS-202ENST00000525435 ARID3AQ99856 593 aa13.16□□□□□ -0.3
CCS-202ENST00000525435 PHF7Q9BWX1 381 aaPredicted RBP13.16□□□□□ -0.3
CCS-202ENST00000525435 B3GNT5Q9BYG0 378 aa13.16□□□□□ -0.3
CCS-202ENST00000525435 CRISPLD1Q9H336 500 aa13.16□□□□□ -0.3
CCS-202ENST00000525435 DPEP3Q9H4B8 488 aa13.16□□□□□ -0.3
CCS-202ENST00000525435 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.16□□□□□ -0.3
CCS-202ENST00000525435 EHD2Q9NZN4 543 aa13.16□□□□□ -0.3
CCS-202ENST00000525435 CEP72Q9P209 647 aa13.16□□□□□ -0.3
CCS-202ENST00000525435 YIPF1Q9Y548 306 aa13.16□□□□□ -0.3
CCS-202ENST00000525435 ATG2AQ2TAZ0 1938 aa13.15□□□□□ -0.3
CCS-202ENST00000525435 ZNF197O14709 1029 aa13.15□□□□□ -0.3
CCS-202ENST00000525435 TRIM66O15016 1216 aa13.15□□□□□ -0.3
CCS-202ENST00000525435 CCL16O15467 120 aa13.15□□□□□ -0.3
CCS-202ENST00000525435 BDNFP23560 247 aa13.15□□□□□ -0.3
CCS-202ENST00000525435 EPHA5P54756 1037 aa13.15□□□□□ -0.3
CCS-202ENST00000525435 CYP27A1Q02318 531 aa13.15□□□□□ -0.3
CCS-202ENST00000525435 UBXN1Q04323 297 aa13.15□□□□□ -0.3
CCS-202ENST00000525435 STILQ15468 1287 aa13.15□□□□□ -0.3
CCS-202ENST00000525435 CLUL1Q15846 466 aa13.15□□□□□ -0.3
CCS-202ENST00000525435 TJAP1Q5JTD0 557 aa13.15□□□□□ -0.3
CCS-202ENST00000525435 CYP4A22Q5TCH4 519 aa13.15□□□□□ -0.3
CCS-202ENST00000525435 KLHDC7AQ5VTJ3 777 aa13.15□□□□□ -0.3
CCS-202ENST00000525435 ARHGAP17Q68EM7 881 aa13.15□□□□□ -0.3
CCS-202ENST00000525435 DPY19L2P1Q6NXN4 242 aa13.15□□□□□ -0.3
CCS-202ENST00000525435 DNAJB7Q7Z6W7 309 aaPredicted RBP13.15□□□□□ -0.3
CCS-202ENST00000525435 FUKQ8N0W3 1084 aa13.15□□□□□ -0.3
CCS-202ENST00000525435 SLC4A11Q8NBS3 891 aa13.15□□□□□ -0.3
CCS-202ENST00000525435 CYFIP2Q96F07 1278 aa13.15□□□□□ -0.3
CCS-202ENST00000525435 SMARCD1Q96GM5 515 aa13.15□□□□□ -0.3
CCS-202ENST00000525435 KREMEN1Q96MU8 473 aa13.15□□□□□ -0.3
CCS-202ENST00000525435 TWNKQ96RR1 684 aa13.15□□□□□ -0.3
CCS-202ENST00000525435 SEPT5Q99719 369 aaPredicted RBP13.15□□□□□ -0.3
CCS-202ENST00000525435 RTN4Q9NQC3 1192 aaKnown RBP13.15□□□□□ -0.3
CCS-202ENST00000525435 PCDHB4Q9Y5E5 795 aa13.15□□□□□ -0.3
CCS-202ENST00000525435 ZFP37Q9Y6Q3 630 aaPredicted RBP13.15□□□□□ -0.3
CCS-202ENST00000525435 REV3LO60673 3130 aa13.15□□□□□ -0.3
CCS-202ENST00000525435 SOBPA7XYQ1 873 aa13.14□□□□□ -0.31
CCS-202ENST00000525435 CSH1P0DML2 217 aa13.14□□□□□ -0.31
CCS-202ENST00000525435 CSH2P0DML3 217 aa13.14□□□□□ -0.31
CCS-202ENST00000525435 VDRP11473 427 aa13.14□□□□□ -0.31
CCS-202ENST00000525435 GRIK1P39086 918 aa13.14□□□□□ -0.31
CCS-202ENST00000525435 PABPC1LQ4VXU2 614 aaKnown RBP13.14□□□□□ -0.31
CCS-202ENST00000525435 TMEM270Q6UE05 265 aa13.14□□□□□ -0.31
CCS-202ENST00000525435 PAQR9Q6ZVX9 377 aa13.14□□□□□ -0.31
CCS-202ENST00000525435 OTOP3Q7RTS5 596 aa13.14□□□□□ -0.31
CCS-202ENST00000525435 ARHGEF19Q8IW93 802 aa13.14□□□□□ -0.31
CCS-202ENST00000525435 TTC9BQ8N6N2 239 aa13.14□□□□□ -0.31
CCS-202ENST00000525435 C12orf29Q8N999 325 aa13.14□□□□□ -0.31
CCS-202ENST00000525435 SHC3Q92529 594 aa13.14□□□□□ -0.31
CCS-202ENST00000525435 MYRFLQ96LU7 910 aa13.14□□□□□ -0.31
CCS-202ENST00000525435 APOL5Q9BWW9 433 aa13.14□□□□□ -0.31
CCS-202ENST00000525435 STK33Q9BYT3 514 aa13.14□□□□□ -0.31
CCS-202ENST00000525435 UBXN6Q9BZV1 441 aa13.14□□□□□ -0.31
CCS-202ENST00000525435 CSNK1G1Q9HCP0 422 aa13.14□□□□□ -0.31
CCS-202ENST00000525435 SIX2Q9NPC8 291 aa13.14□□□□□ -0.31
CCS-202ENST00000525435 COMMD8Q9NX08 183 aa13.14□□□□□ -0.31
CCS-202ENST00000525435 DNMT3BQ9UBC3 853 aaKnown RBP13.14□□□□□ -0.31
CCS-202ENST00000525435 HMGXB4Q9UGU5 601 aa13.14□□□□□ -0.31
CCS-202ENST00000525435 ZMYM5Q9UJ78 669 aa13.14□□□□□ -0.31
CCS-202ENST00000525435 DNAJC12Q9UKB3 198 aa13.14□□□□□ -0.31
CCS-202ENST00000525435 SIK3Q9Y2K2 1263 aa13.14□□□□□ -0.31
CCS-202ENST00000525435 NR2E1Q9Y466 385 aa13.14□□□□□ -0.31
CCS-202ENST00000525435 MTCL1Q9Y4B5 1905 aaKnown RBP13.13□□□□□ -0.31
CCS-202ENST00000525435 NCOR1O75376 2440 aa13.13□□□□□ -0.31
CCS-202ENST00000525435 A0A1B0GTH6 734 aa13.13□□□□□ -0.31
CCS-202ENST00000525435 A0A1W2PQC6 194 aa13.13□□□□□ -0.31
CCS-202ENST00000525435 DLL1O00548 723 aa13.13□□□□□ -0.31
CCS-202ENST00000525435 SERPINC1P01008 464 aa13.13□□□□□ -0.31
CCS-202ENST00000525435 RHOP08100 348 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms