RNA–Protein interactions for RNA: ENST00000524955.1

CHMP4A-202, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 2

Gene CHMP4A, Length 268 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-202ENST00000524955 ZSWIM1Q9BR11 485 aa4.9□□□□□ -1.63
CHMP4A-202ENST00000524955 ACBD6Q9BR61 282 aa4.9□□□□□ -1.63
CHMP4A-202ENST00000524955 CORO1BQ9BR76 489 aa4.9□□□□□ -1.63
CHMP4A-202ENST00000524955 POMKQ9H5K3 350 aa4.9□□□□□ -1.63
CHMP4A-202ENST00000524955 VRTNQ9H8Y1 702 aa4.9□□□□□ -1.63
CHMP4A-202ENST00000524955 ZNF334Q9HCZ1 680 aaPredicted RBP4.9□□□□□ -1.63
CHMP4A-202ENST00000524955 PLCB1Q9NQ66 1216 aa4.9□□□□□ -1.63
CHMP4A-202ENST00000524955 KRT82Q9NSB4 513 aa4.9□□□□□ -1.63
CHMP4A-202ENST00000524955 IFNKQ9P0W0 207 aa4.9□□□□□ -1.63
CHMP4A-202ENST00000524955 THEGQ9P2T0 379 aa4.9□□□□□ -1.63
CHMP4A-202ENST00000524955 STK39Q9UEW8 545 aa4.9□□□□□ -1.63
CHMP4A-202ENST00000524955 AFF4Q9UHB7 1163 aaKnown RBP4.9□□□□□ -1.63
CHMP4A-202ENST00000524955 CDH9Q9ULB4 789 aa4.9□□□□□ -1.63
CHMP4A-202ENST00000524955 PCDHB5Q9Y5E4 795 aa4.9□□□□□ -1.63
CHMP4A-202ENST00000524955 INSL5Q9Y5Q6 135 aa4.9□□□□□ -1.63
CHMP4A-202ENST00000524955 FHOD1Q9Y613 1164 aa4.9□□□□□ -1.63
CHMP4A-202ENST00000524955 CDH23Q9H251 3354 aa4.9□□□□□ -1.63
CHMP4A-202ENST00000524955 ANK1P16157 1881 aa4.9□□□□□ -1.63
CHMP4A-202ENST00000524955 A0A1W2PRU2 124 aa4.89□□□□□ -1.63
CHMP4A-202ENST00000524955 ARHGEF37A1IGU5 675 aa4.89□□□□□ -1.63
CHMP4A-202ENST00000524955 SLC38A8A6NNN8 435 aa4.89□□□□□ -1.63
CHMP4A-202ENST00000524955 LGALS16A8MUM7 142 aa4.89□□□□□ -1.63
CHMP4A-202ENST00000524955 FOXN3O00409 490 aaPredicted RBP4.89□□□□□ -1.63
CHMP4A-202ENST00000524955 SCAMP3O14828 347 aaKnown RBP4.89□□□□□ -1.63
CHMP4A-202ENST00000524955 P4HA2O15460 535 aa4.89□□□□□ -1.63
CHMP4A-202ENST00000524955 CYP26A1O43174 497 aa4.89□□□□□ -1.63
CHMP4A-202ENST00000524955 AP1G2O75843 785 aa4.89□□□□□ -1.63
CHMP4A-202ENST00000524955 GFPT2O94808 682 aa4.89□□□□□ -1.63
CHMP4A-202ENST00000524955 NOL4O94818 638 aa4.89□□□□□ -1.63
CHMP4A-202ENST00000524955 ABL1P00519 1130 aa4.89□□□□□ -1.63
CHMP4A-202ENST00000524955 RHOP08100 348 aa4.89□□□□□ -1.63
CHMP4A-202ENST00000524955 CEBPBP17676 345 aa4.89□□□□□ -1.63
CHMP4A-202ENST00000524955 GBP2P32456 591 aaPredicted RBP4.89□□□□□ -1.63
CHMP4A-202ENST00000524955 CCR2P41597 374 aa4.89□□□□□ -1.63
CHMP4A-202ENST00000524955 ALDH1A3P47895 512 aa4.89□□□□□ -1.63
CHMP4A-202ENST00000524955 RGS7P49802 495 aa4.89□□□□□ -1.63
CHMP4A-202ENST00000524955 MFAP3P55082 362 aa4.89□□□□□ -1.63
CHMP4A-202ENST00000524955 ZNF445P59923 1031 aa4.89□□□□□ -1.63
CHMP4A-202ENST00000524955 POLR2FP61218 127 aaKnown RBP4.89□□□□□ -1.63
CHMP4A-202ENST00000524955 USP46P62068 366 aa4.89□□□□□ -1.63
CHMP4A-202ENST00000524955 TPM4P67936 248 aa4.89□□□□□ -1.63
CHMP4A-202ENST00000524955 MRPS5P82675 430 aaKnown RBP4.89□□□□□ -1.63
CHMP4A-202ENST00000524955 CYP4F8P98187 520 aa4.89□□□□□ -1.63
CHMP4A-202ENST00000524955 ARID5AQ03989 594 aa4.89□□□□□ -1.63
CHMP4A-202ENST00000524955 ENPEPQ07075 957 aa4.89□□□□□ -1.63
CHMP4A-202ENST00000524955 INCA1Q0VD86 236 aa4.89□□□□□ -1.63
CHMP4A-202ENST00000524955 CETN1Q12798 172 aa4.89□□□□□ -1.63
CHMP4A-202ENST00000524955 DRAP1Q14919 205 aaPredicted RBP4.89□□□□□ -1.63
CHMP4A-202ENST00000524955 COL19A1Q14993 1142 aa4.89□□□□□ -1.63
CHMP4A-202ENST00000524955 SLC5A9Q2M3M2 681 aa4.89□□□□□ -1.63
CHMP4A-202ENST00000524955 LEXMQ3ZCV2 418 aa4.89□□□□□ -1.63
CHMP4A-202ENST00000524955 KLHDC7AQ5VTJ3 777 aa4.89□□□□□ -1.63
CHMP4A-202ENST00000524955 TAF3Q5VWG9 929 aa4.89□□□□□ -1.63
CHMP4A-202ENST00000524955 TPGS2Q68CL5 300 aa4.89□□□□□ -1.63
CHMP4A-202ENST00000524955 CES5AQ6NT32 575 aa4.89□□□□□ -1.63
CHMP4A-202ENST00000524955 DENND1BQ6P3S1 775 aa4.89□□□□□ -1.63
CHMP4A-202ENST00000524955 FAM171BQ6P995 826 aa4.89□□□□□ -1.63
CHMP4A-202ENST00000524955 TMEM184AQ6ZMB5 413 aa4.89□□□□□ -1.63
CHMP4A-202ENST00000524955 CCDC149Q6ZUS6 474 aa4.89□□□□□ -1.63
CHMP4A-202ENST00000524955 GPR149Q86SP6 731 aa4.89□□□□□ -1.63
CHMP4A-202ENST00000524955 PASD1Q8IV76 773 aa4.89□□□□□ -1.63
CHMP4A-202ENST00000524955 PHF6Q8IWS0 365 aaKnown RBP eCLIP4.89□□□□□ -1.63
CHMP4A-202ENST00000524955 TCEAL8Q8IYN2 117 aa4.89□□□□□ -1.63
CHMP4A-202ENST00000524955 FUKQ8N0W3 1084 aa4.89□□□□□ -1.63
CHMP4A-202ENST00000524955 SMRP1Q8NCR6 262 aa4.89□□□□□ -1.63
CHMP4A-202ENST00000524955 ANKRD20A12PQ8NF67 263 aa4.89□□□□□ -1.63
CHMP4A-202ENST00000524955 SCAMP5Q8TAC9 235 aa4.89□□□□□ -1.63
CHMP4A-202ENST00000524955 CPLX3Q8WVH0 158 aa4.89□□□□□ -1.63
CHMP4A-202ENST00000524955 RSAD2Q8WXG1 361 aa4.89□□□□□ -1.63
CHMP4A-202ENST00000524955 NDRG1Q92597 394 aaKnown RBP4.89□□□□□ -1.63
CHMP4A-202ENST00000524955 MCRS1Q96EZ8 462 aa4.89□□□□□ -1.63
CHMP4A-202ENST00000524955 CYFIP2Q96F07 1278 aa4.89□□□□□ -1.63
CHMP4A-202ENST00000524955 TMEM176AQ96HP8 235 aa4.89□□□□□ -1.63
CHMP4A-202ENST00000524955 TNIP3Q96KP6 325 aa4.89□□□□□ -1.63
CHMP4A-202ENST00000524955 ASB2Q96Q27 587 aa4.89□□□□□ -1.63
CHMP4A-202ENST00000524955 SMOQ99835 787 aa4.89□□□□□ -1.63
CHMP4A-202ENST00000524955 NT5C1AQ9BXI3 368 aa4.89□□□□□ -1.63
CHMP4A-202ENST00000524955 PRKD2Q9BZL6 878 aa4.89□□□□□ -1.63
CHMP4A-202ENST00000524955 XPO4Q9C0E2 1151 aaKnown RBP4.89□□□□□ -1.63
CHMP4A-202ENST00000524955 SMG9Q9H0W8 520 aaKnown RBP4.89□□□□□ -1.63
CHMP4A-202ENST00000524955 GANQ9H2C0 597 aa4.89□□□□□ -1.63
CHMP4A-202ENST00000524955 SMOC2Q9H3U7 446 aa4.89□□□□□ -1.63
CHMP4A-202ENST00000524955 PLEKHA4Q9H4M7 779 aa4.89□□□□□ -1.63
CHMP4A-202ENST00000524955 SFXN1Q9H9B4 322 aa4.89□□□□□ -1.63
CHMP4A-202ENST00000524955 CYP3A43Q9HB55 503 aa4.89□□□□□ -1.63
CHMP4A-202ENST00000524955 CD320Q9NPF0 282 aa4.89□□□□□ -1.63
CHMP4A-202ENST00000524955 RTN4Q9NQC3 1192 aaKnown RBP4.89□□□□□ -1.63
CHMP4A-202ENST00000524955 DZANK1Q9NVP4 752 aa4.89□□□□□ -1.63
CHMP4A-202ENST00000524955 APEX2Q9UBZ4 518 aa4.89□□□□□ -1.63
CHMP4A-202ENST00000524955 SIK3Q9Y2K2 1263 aa4.89□□□□□ -1.63
CHMP4A-202ENST00000524955 GTF3C5Q9Y5Q8 519 aaPredicted RBP4.89□□□□□ -1.63
CHMP4A-202ENST00000524955 ATG2AQ2TAZ0 1938 aa4.89□□□□□ -1.63
CHMP4A-202ENST00000524955 PDCD11Q14690 1871 aaKnown RBP4.88□□□□□ -1.63
CHMP4A-202ENST00000524955 VWA8A3KMH1 1905 aa4.88□□□□□ -1.63
CHMP4A-202ENST00000524955 TRIP11Q15643 1979 aa4.88□□□□□ -1.63
CHMP4A-202ENST00000524955 A0A1B0GTH6 734 aa4.88□□□□□ -1.63
CHMP4A-202ENST00000524955 C2CD4DB7Z1M9 353 aa4.88□□□□□ -1.63
CHMP4A-202ENST00000524955 PMM2O15305 246 aa4.88□□□□□ -1.63
CHMP4A-202ENST00000524955 THAP12O43422 761 aa4.88□□□□□ -1.63
CHMP4A-202ENST00000524955 XYLBO75191 536 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms