RNA–Protein interactions for RNA: ENST00000523952.5

PTPN12-216, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 4

Gene PTPN12, Length 500 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-216ENST00000523952 NAIF1Q69YI7 327 aaPredicted RBP10.07□□□□□ -0.8
PTPN12-216ENST00000523952 SLC23A3Q6PIS1 610 aa10.07□□□□□ -0.8
PTPN12-216ENST00000523952 RABEPKQ7Z6M1 372 aa10.07□□□□□ -0.8
PTPN12-216ENST00000523952 DCP1BQ8IZD4 617 aaKnown RBP10.07□□□□□ -0.8
PTPN12-216ENST00000523952 MDGA1Q8NFP4 955 aa10.07□□□□□ -0.8
PTPN12-216ENST00000523952 CEP76Q8TAP6 659 aa10.07□□□□□ -0.8
PTPN12-216ENST00000523952 OSCP1Q8WVF1 389 aa10.07□□□□□ -0.8
PTPN12-216ENST00000523952 HNRNPLLQ8WVV9 542 aaKnown RBP10.07□□□□□ -0.8
PTPN12-216ENST00000523952 TNFRSF25Q93038 417 aa10.07□□□□□ -0.8
PTPN12-216ENST00000523952 LRIG1Q96JA1 1093 aa10.07□□□□□ -0.8
PTPN12-216ENST00000523952 RAB34Q9BZG1 259 aa10.07□□□□□ -0.8
PTPN12-216ENST00000523952 RPF1Q9H9Y2 349 aaKnown RBP10.07□□□□□ -0.8
PTPN12-216ENST00000523952 C17orf75Q9HAS0 396 aa10.07□□□□□ -0.8
PTPN12-216ENST00000523952 IL21Q9HBE4 155 aa10.07□□□□□ -0.8
PTPN12-216ENST00000523952 ARHGAP28Q9P2N2 729 aa10.07□□□□□ -0.8
PTPN12-216ENST00000523952 LRWD1Q9UFC0 647 aa10.07□□□□□ -0.8
PTPN12-216ENST00000523952 KCNG1Q9UIX4 513 aa10.07□□□□□ -0.8
PTPN12-216ENST00000523952 MMP17Q9ULZ9 603 aa10.07□□□□□ -0.8
PTPN12-216ENST00000523952 SLC6A14Q9UN76 642 aa10.07□□□□□ -0.8
PTPN12-216ENST00000523952 DNM3Q9UQ16 869 aa10.07□□□□□ -0.8
PTPN12-216ENST00000523952 STK24Q9Y6E0 443 aa10.07□□□□□ -0.8
PTPN12-216ENST00000523952 WNT6Q9Y6F9 365 aa10.07□□□□□ -0.8
PTPN12-216ENST00000523952 UPK3BL1B0FP48 263 aa10.06□□□□□ -0.8
PTPN12-216ENST00000523952 UPK3BL2E5RIL1 263 aa10.06□□□□□ -0.8
PTPN12-216ENST00000523952 TULP1O00294 542 aaPredicted RBP10.06□□□□□ -0.8
PTPN12-216ENST00000523952 WNT7AO00755 349 aa10.06□□□□□ -0.8
PTPN12-216ENST00000523952 AP5Z1O43299 807 aa10.06□□□□□ -0.8
PTPN12-216ENST00000523952 PFKFB2O60825 505 aa10.06□□□□□ -0.8
PTPN12-216ENST00000523952 PRPF40AO75400 957 aaKnown RBP10.06□□□□□ -0.8
PTPN12-216ENST00000523952 NFATC1O95644 943 aa10.06□□□□□ -0.8
PTPN12-216ENST00000523952 SYPP08247 313 aa10.06□□□□□ -0.8
PTPN12-216ENST00000523952 CSH1P0DML2 217 aa10.06□□□□□ -0.8
PTPN12-216ENST00000523952 CSH2P0DML3 217 aa10.06□□□□□ -0.8
PTPN12-216ENST00000523952 HAPLN1P10915 354 aaPredicted RBP10.06□□□□□ -0.8
PTPN12-216ENST00000523952 AARSP49588 968 aaKnown RBP eCLIP10.06□□□□□ -0.81e-15■■■■■ 41.5
PTPN12-216ENST00000523952 GUCY2FP51841 1108 aa10.06□□□□□ -0.8
PTPN12-216ENST00000523952 LILRA4P59901 499 aa10.06□□□□□ -0.8
PTPN12-216ENST00000523952 FAM160A1Q05DH4 1040 aa10.06□□□□□ -0.8
PTPN12-216ENST00000523952 SEMA3BQ13214 749 aa10.06□□□□□ -0.8
PTPN12-216ENST00000523952 GNL2Q13823 731 aaKnown RBP10.06□□□□□ -0.8
PTPN12-216ENST00000523952 ZNF268Q14587 947 aaPredicted RBP10.06□□□□□ -0.8
PTPN12-216ENST00000523952 ZNF174Q15697 407 aa10.06□□□□□ -0.8
PTPN12-216ENST00000523952 KYAT1Q16773 422 aa10.06□□□□□ -0.8
PTPN12-216ENST00000523952 PIP4P1Q86T03 277 aa10.06□□□□□ -0.8
PTPN12-216ENST00000523952 MON1AQ86VX9 555 aa10.06□□□□□ -0.8
PTPN12-216ENST00000523952 RASSF3Q86WH2 238 aa10.06□□□□□ -0.8
PTPN12-216ENST00000523952 SKAP1Q86WV1 359 aa10.06□□□□□ -0.8
PTPN12-216ENST00000523952 TMEM130Q8N3G9 435 aa10.06□□□□□ -0.8
PTPN12-216ENST00000523952 FSIP1Q8NA03 581 aa10.06□□□□□ -0.8
PTPN12-216ENST00000523952 OR10T2Q8NGX3 314 aa10.06□□□□□ -0.8
PTPN12-216ENST00000523952 SNX29Q8TEQ0 813 aa10.06□□□□□ -0.8
PTPN12-216ENST00000523952 USP33Q8TEY7 942 aa10.06□□□□□ -0.8
PTPN12-216ENST00000523952 HMGB4Q8WW32 186 aa10.06□□□□□ -0.8
PTPN12-216ENST00000523952 RLN3Q8WXF3 142 aa10.06□□□□□ -0.8
PTPN12-216ENST00000523952 TM6SF1Q9BZW5 370 aa10.06□□□□□ -0.8
PTPN12-216ENST00000523952 ZCWPW1Q9H0M4 648 aa10.06□□□□□ -0.8
PTPN12-216ENST00000523952 PCDHB5Q9Y5E4 795 aa10.06□□□□□ -0.8
PTPN12-216ENST00000523952 URB1O60287 2271 aaKnown RBP10.06□□□□□ -0.8
PTPN12-216ENST00000523952 TTC26A0AVF1 554 aa10.05□□□□□ -0.8
PTPN12-216ENST00000523952 MYMKA6NI61 221 aa10.05□□□□□ -0.8
PTPN12-216ENST00000523952 SFI1A8K8P3 1242 aa10.05□□□□□ -0.8
PTPN12-216ENST00000523952 LACTBL1A8MY62 500 aa10.05□□□□□ -0.8
PTPN12-216ENST00000523952 ZBTB24O43167 697 aaPredicted RBP10.05□□□□□ -0.8
PTPN12-216ENST00000523952 F11P03951 625 aa10.05□□□□□ -0.8
PTPN12-216ENST00000523952 ITPKAP23677 461 aa10.05□□□□□ -0.8
PTPN12-216ENST00000523952 HOXD12P35452 270 aa10.05□□□□□ -0.8
PTPN12-216ENST00000523952 PTGER3P43115 390 aa10.05□□□□□ -0.8
PTPN12-216ENST00000523952 LIG4P49917 911 aa10.05□□□□□ -0.8
PTPN12-216ENST00000523952 MRPS21P82921 87 aaKnown RBP10.05□□□□□ -0.8
PTPN12-216ENST00000523952 TSPY1Q01534 308 aa10.05□□□□□ -0.8
PTPN12-216ENST00000523952 RPL6Q02878 288 aaKnown RBP10.05□□□□□ -0.8
PTPN12-216ENST00000523952 KCNB1Q14721 858 aa10.05□□□□□ -0.8
PTPN12-216ENST00000523952 TRIP6Q15654 476 aaKnown RBP10.05□□□□□ -0.8
PTPN12-216ENST00000523952 CRY1Q16526 586 aa10.05□□□□□ -0.8
PTPN12-216ENST00000523952 EOGTQ5NDL2 527 aa10.05□□□□□ -0.8
PTPN12-216ENST00000523952 ZPBP2Q6X784 338 aa10.05□□□□□ -0.8
PTPN12-216ENST00000523952 TAS1R3Q7RTX0 852 aa10.05□□□□□ -0.8
PTPN12-216ENST00000523952 RAB44Q7Z6P3 723 aaPredicted RBP10.05□□□□□ -0.8
PTPN12-216ENST00000523952 EFCAB13Q8IY85 973 aa10.05□□□□□ -0.8
PTPN12-216ENST00000523952 MINDY1Q8N5J2 469 aa10.05□□□□□ -0.8
PTPN12-216ENST00000523952 GLIS3Q8NEA6 775 aa10.05□□□□□ -0.8
PTPN12-216ENST00000523952 TSPAN18Q96SJ8 248 aa10.05□□□□□ -0.8
PTPN12-216ENST00000523952 PYM1Q9BRP8 204 aaKnown RBP10.05□□□□□ -0.8
PTPN12-216ENST00000523952 TMEM206Q9H813 350 aa10.05□□□□□ -0.8
PTPN12-216ENST00000523952 TMEM74BQ9NUR3 256 aa10.05□□□□□ -0.8
PTPN12-216ENST00000523952 MBD1Q9UIS9 605 aaPredicted RBP10.05□□□□□ -0.8
PTPN12-216ENST00000523952 APOBEC2Q9Y235 224 aaKnown RBP10.05□□□□□ -0.8
PTPN12-216ENST00000523952 MYLKQ15746 1914 aa10.05□□□□□ -0.8
PTPN12-216ENST00000523952 FREM2Q5SZK8 3169 aa10.05□□□□□ -0.8
PTPN12-216ENST00000523952 FLNBO75369 2602 aaKnown RBP10.04□□□□□ -0.8
PTPN12-216ENST00000523952 HELZ2Q9BYK8 2649 aaKnown RBP10.04□□□□□ -0.8
PTPN12-216ENST00000523952 BPTFQ12830 3046 aa10.04□□□□□ -0.8
PTPN12-216ENST00000523952 LOC400499M0QZD8 3231 aa10.04□□□□□ -0.8
PTPN12-216ENST00000523952 FAM221BA6H8Z2 402 aa10.04□□□□□ -0.8
PTPN12-216ENST00000523952 E9PMD0 336 aa10.04□□□□□ -0.8
PTPN12-216ENST00000523952 H0YCG3 227 aa10.04□□□□□ -0.8
PTPN12-216ENST00000523952 CYB561D2O14569 222 aa10.04□□□□□ -0.8
PTPN12-216ENST00000523952 ABLIM1O14639 778 aa10.04□□□□□ -0.8
PTPN12-216ENST00000523952 PPEF2O14830 753 aa10.04□□□□□ -0.8
PTPN12-216ENST00000523952 KLF8O95600 359 aaPredicted RBP10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms