RNA–Protein interactions for RNA: ENST00000523469.5

CPNE3-206, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 656 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-206ENST00000523469 BTBD1Q9H0C5 482 aa7.28□□□□□ -1.24
CPNE3-206ENST00000523469 SMURF2Q9HAU4 748 aa7.28□□□□□ -1.24
CPNE3-206ENST00000523469 CASS4Q9NQ75 786 aa7.28□□□□□ -1.24
CPNE3-206ENST00000523469 CPNE7Q9UBL6 633 aa7.28□□□□□ -1.24
CPNE3-206ENST00000523469 OGDHLQ9ULD0 1010 aa7.28□□□□□ -1.24
CPNE3-206ENST00000523469 DMTF1Q9Y222 760 aa7.28□□□□□ -1.24
CPNE3-206ENST00000523469 PCDHGB6Q9Y5F9 930 aa7.28□□□□□ -1.24
CPNE3-206ENST00000523469 TMEM191CA6NGB0 347 aa7.27□□□□□ -1.25
CPNE3-206ENST00000523469 MAP4K4O95819 1239 aaPredicted RBP7.27□□□□□ -1.25
CPNE3-206ENST00000523469 SRGNP10124 158 aa7.27□□□□□ -1.25
CPNE3-206ENST00000523469 XRCC6P12956 609 aaKnown RBP eCLIP7.27□□□□□ -1.25
CPNE3-206ENST00000523469 AVPR1BP47901 424 aa7.27□□□□□ -1.25
CPNE3-206ENST00000523469 WNT3P56703 355 aa7.27□□□□□ -1.25
CPNE3-206ENST00000523469 FMO1Q01740 532 aa7.27□□□□□ -1.25
CPNE3-206ENST00000523469 SAFBQ15424 915 aaKnown RBP eCLIP7.27□□□□□ -1.25
CPNE3-206ENST00000523469 CCSAPQ6IQ19 270 aaPredicted RBP7.27□□□□□ -1.25
CPNE3-206ENST00000523469 LAYNQ6UX15 382 aa7.27□□□□□ -1.25
CPNE3-206ENST00000523469 KRT78Q8N1N4 520 aa7.27□□□□□ -1.25
CPNE3-206ENST00000523469 SLC15A4Q8N697 577 aa7.27□□□□□ -1.25
CPNE3-206ENST00000523469 NMD3Q96D46 503 aaKnown RBP7.27□□□□□ -1.25
CPNE3-206ENST00000523469 Q96MF0 132 aa7.27□□□□□ -1.25
CPNE3-206ENST00000523469 ZNF518BQ9C0D4 1074 aa7.27□□□□□ -1.25
CPNE3-206ENST00000523469 TTYH3Q9C0H2 523 aa7.27□□□□□ -1.25
CPNE3-206ENST00000523469 ZNF287Q9HBT7 754 aa7.27□□□□□ -1.25
CPNE3-206ENST00000523469 SACM1LQ9NTJ5 587 aa7.27□□□□□ -1.25
CPNE3-206ENST00000523469 SYBUQ9NX95 663 aa7.27□□□□□ -1.25
CPNE3-206ENST00000523469 STK32BQ9NY57 414 aa7.27□□□□□ -1.25
CPNE3-206ENST00000523469 AFF4Q9UHB7 1163 aaKnown RBP7.27□□□□□ -1.25
CPNE3-206ENST00000523469 IQSEC2Q5JU85 1478 aa7.27□□□□□ -1.25
CPNE3-206ENST00000523469 COL4A3Q01955 1670 aa7.26□□□□□ -1.25
CPNE3-206ENST00000523469 GRID2IPA4D2P6 1211 aa7.26□□□□□ -1.25
CPNE3-206ENST00000523469 TRIM43BA6NCK2 446 aa7.26□□□□□ -1.25
CPNE3-206ENST00000523469 DCLK1O15075 740 aa7.26□□□□□ -1.25
CPNE3-206ENST00000523469 PHKG2P15735 406 aa7.26□□□□□ -1.25
CPNE3-206ENST00000523469 LOXL3P58215 753 aa7.26□□□□□ -1.25
CPNE3-206ENST00000523469 LCE5AQ5TCM9 118 aa7.26□□□□□ -1.25
CPNE3-206ENST00000523469 KSR2Q6VAB6 950 aa7.26□□□□□ -1.25
CPNE3-206ENST00000523469 Q6YL49 198 aa7.26□□□□□ -1.25
CPNE3-206ENST00000523469 Q6ZPA2 131 aa7.26□□□□□ -1.25
CPNE3-206ENST00000523469 PJA1Q8NG27 643 aa7.26□□□□□ -1.25
CPNE3-206ENST00000523469 LINC00476Q8WZB0 136 aa7.26□□□□□ -1.25
CPNE3-206ENST00000523469 MAML1Q92585 1016 aa7.26□□□□□ -1.25
CPNE3-206ENST00000523469 TRIM43Q96BQ3 446 aaPredicted RBP7.26□□□□□ -1.25
CPNE3-206ENST00000523469 NELL2Q99435 816 aa7.26□□□□□ -1.25
CPNE3-206ENST00000523469 AIFM2Q9BRQ8 373 aa7.26□□□□□ -1.25
CPNE3-206ENST00000523469 KCTD5Q9NXV2 234 aa7.26□□□□□ -1.25
CPNE3-206ENST00000523469 FAM50BQ9Y247 325 aa7.26□□□□□ -1.25
CPNE3-206ENST00000523469 ARAP3Q8WWN8 1544 aa7.26□□□□□ -1.25
CPNE3-206ENST00000523469 YEATS2Q9ULM3 1422 aa7.26□□□□□ -1.25
CPNE3-206ENST00000523469 MAST3O60307 1309 aa7.26□□□□□ -1.25
CPNE3-206ENST00000523469 PQBP1O60828 265 aaKnown RBP7.25□□□□□ -1.25
CPNE3-206ENST00000523469 MYL1P05976 194 aa7.25□□□□□ -1.25
CPNE3-206ENST00000523469 PXNP49023 591 aaPredicted RBP7.25□□□□□ -1.25
CPNE3-206ENST00000523469 ZNF134P52741 427 aa7.25□□□□□ -1.25
CPNE3-206ENST00000523469 SATB1Q01826 763 aa7.25□□□□□ -1.25
CPNE3-206ENST00000523469 KLF10Q13118 480 aa7.25□□□□□ -1.25
CPNE3-206ENST00000523469 SF3B3Q15393 1217 aaKnown RBP7.25□□□□□ -1.25
CPNE3-206ENST00000523469 LAIR1Q6GTX8 287 aa7.25□□□□□ -1.25
CPNE3-206ENST00000523469 VWA1Q6PCB0 445 aa7.25□□□□□ -1.25
CPNE3-206ENST00000523469 TMEM108Q6UXF1 575 aa7.25□□□□□ -1.25
CPNE3-206ENST00000523469 MPP5Q8N3R9 675 aa7.25□□□□□ -1.25
CPNE3-206ENST00000523469 SLC16A11Q8NCK7 471 aa7.25□□□□□ -1.25
CPNE3-206ENST00000523469 SUPT20HQ8NEM7 779 aa7.25□□□□□ -1.25
CPNE3-206ENST00000523469 SLC30A5Q8TAD4 765 aa7.25□□□□□ -1.25
CPNE3-206ENST00000523469 SCAND2PQ9GZW5 306 aaPredicted RBP7.25□□□□□ -1.25
CPNE3-206ENST00000523469 A1CFQ9NQ94 594 aaKnown RBP7.25□□□□□ -1.25
CPNE3-206ENST00000523469 SHOC2Q9UQ13 582 aa7.25□□□□□ -1.25
CPNE3-206ENST00000523469 ARHGEF40Q8TER5 1519 aa7.25□□□□□ -1.25
CPNE3-206ENST00000523469 FOXN3O00409 490 aaPredicted RBP7.24□□□□□ -1.25
CPNE3-206ENST00000523469 PROM1O43490 865 aa7.24□□□□□ -1.25
CPNE3-206ENST00000523469 ZKSCAN1P17029 563 aaPredicted RBP7.24□□□□□ -1.25
CPNE3-206ENST00000523469 KRT4P19013 534 aa7.24□□□□□ -1.25
CPNE3-206ENST00000523469 CD6P30203 668 aa7.24□□□□□ -1.25
CPNE3-206ENST00000523469 FHL2Q14192 279 aa7.24□□□□□ -1.25
CPNE3-206ENST00000523469 RBM20Q5T481 1227 aaKnown RBP7.24□□□□□ -1.25
CPNE3-206ENST00000523469 SFRP4Q6FHJ7 346 aaPredicted RBP7.24□□□□□ -1.25
CPNE3-206ENST00000523469 GAS2L3Q86XJ1 694 aa7.24□□□□□ -1.25
CPNE3-206ENST00000523469 B3GALNT2Q8NCR0 500 aa7.24□□□□□ -1.25
CPNE3-206ENST00000523469 LPIN2Q92539 896 aa7.24□□□□□ -1.25
CPNE3-206ENST00000523469 PHKBQ93100 1093 aa7.24□□□□□ -1.25
CPNE3-206ENST00000523469 CAVIN3Q969G5 261 aa7.24□□□□□ -1.25
CPNE3-206ENST00000523469 MSLNLQ96KJ4 702 aa7.24□□□□□ -1.25
CPNE3-206ENST00000523469 APOL5Q9BWW9 433 aa7.24□□□□□ -1.25
CPNE3-206ENST00000523469 MS4A7Q9GZW8 240 aaPredicted RBP7.24□□□□□ -1.25
CPNE3-206ENST00000523469 PCED1AQ9H1Q7 454 aa7.24□□□□□ -1.25
CPNE3-206ENST00000523469 ARNT2Q9HBZ2 717 aa7.24□□□□□ -1.25
CPNE3-206ENST00000523469 IQGAP2Q13576 1575 aa7.24□□□□□ -1.25
CPNE3-206ENST00000523469 ANO9A1A5B4 782 aa7.23□□□□□ -1.25
CPNE3-206ENST00000523469 APAF1O14727 1248 aa7.23□□□□□ -1.25
CPNE3-206ENST00000523469 FOXN1O15353 648 aa7.23□□□□□ -1.25
CPNE3-206ENST00000523469 PPP3CBP16298 524 aa7.23□□□□□ -1.25
CPNE3-206ENST00000523469 LILRA4P59901 499 aa7.23□□□□□ -1.25
CPNE3-206ENST00000523469 ITIH3Q06033 890 aa7.23□□□□□ -1.25
CPNE3-206ENST00000523469 C3orf38Q5JPI3 329 aa7.23□□□□□ -1.25
CPNE3-206ENST00000523469 Q6ZNX1 250 aa7.23□□□□□ -1.25
CPNE3-206ENST00000523469 NOL8Q76FK4 1167 aaKnown RBP7.23□□□□□ -1.25
CPNE3-206ENST00000523469 C11orf96Q7Z7L8 435 aa7.23□□□□□ -1.25
CPNE3-206ENST00000523469 SESTD1Q86VW0 696 aa7.23□□□□□ -1.25
CPNE3-206ENST00000523469 MICU3Q86XE3 530 aa7.23□□□□□ -1.25
CPNE3-206ENST00000523469 FAM109AQ8N4B1 249 aa7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms