RNA–Protein interactions for RNA: ENST00000521932.1

VPS13B-210, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 1,055 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-210ENST00000521932 TAF4BQ92750 862 aa8.97□□□□□ -0.97
VPS13B-210ENST00000521932 FAXDC2Q96IV6 333 aa8.97□□□□□ -0.97
VPS13B-210ENST00000521932 FAM84AQ96KN4 292 aa8.97□□□□□ -0.97
VPS13B-210ENST00000521932 SUSD3Q96L08 255 aa8.97□□□□□ -0.97
VPS13B-210ENST00000521932 TUBGCP2Q9BSJ2 902 aa8.97□□□□□ -0.97
VPS13B-210ENST00000521932 VN1R3Q9BXE9 311 aa8.97□□□□□ -0.97
VPS13B-210ENST00000521932 GPR62Q9BZJ7 368 aa8.97□□□□□ -0.97
VPS13B-210ENST00000521932 LMAN2LQ9H0V9 348 aa8.97□□□□□ -0.97
VPS13B-210ENST00000521932 XYLT2Q9H1B5 865 aa8.97□□□□□ -0.97
VPS13B-210ENST00000521932 TSPY26PQ9H489 355 aa8.97□□□□□ -0.97
VPS13B-210ENST00000521932 CERS4Q9HA82 394 aa8.97□□□□□ -0.97
VPS13B-210ENST00000521932 ALG13Q9NP73 1137 aaKnown RBP8.97□□□□□ -0.97
VPS13B-210ENST00000521932 GDAP2Q9NXN4 497 aa8.97□□□□□ -0.97
VPS13B-210ENST00000521932 MTUS1Q9ULD2 1270 aa8.97□□□□□ -0.97
VPS13B-210ENST00000521932 HCN4Q9Y3Q4 1203 aa8.97□□□□□ -0.97
VPS13B-210ENST00000521932 IRAK3Q9Y616 596 aa8.97□□□□□ -0.97
VPS13B-210ENST00000521932 EPOPA6NHQ4 379 aa8.96□□□□□ -0.98
VPS13B-210ENST00000521932 BECN2A8MW95 431 aa8.96□□□□□ -0.98
VPS13B-210ENST00000521932 SYN3O14994 580 aa8.96□□□□□ -0.98
VPS13B-210ENST00000521932 PHACTR2O75167 634 aa8.96□□□□□ -0.98
VPS13B-210ENST00000521932 ASS1P00966 412 aaKnown RBP8.96□□□□□ -0.98
VPS13B-210ENST00000521932 AFPP02771 609 aaKnown RBP8.96□□□□□ -0.98
VPS13B-210ENST00000521932 ITGB2P05107 769 aa8.96□□□□□ -0.98
VPS13B-210ENST00000521932 CYP11A1P05108 521 aa8.96□□□□□ -0.98
VPS13B-210ENST00000521932 KRT19P08727 400 aa8.96□□□□□ -0.98
VPS13B-210ENST00000521932 FAM163BP0C2L3 166 aa8.96□□□□□ -0.98
VPS13B-210ENST00000521932 EPXP11678 715 aa8.96□□□□□ -0.98
VPS13B-210ENST00000521932 DNAJB1P25685 340 aa8.96□□□□□ -0.98
VPS13B-210ENST00000521932 BRCC3P46736 316 aa8.96□□□□□ -0.98
VPS13B-210ENST00000521932 MXI1P50539 228 aa8.96□□□□□ -0.98
VPS13B-210ENST00000521932 FXR1P51114 621 aaKnown RBP eCLIP8.96□□□□□ -0.98
VPS13B-210ENST00000521932 SEC13P55735 322 aa8.96□□□□□ -0.98
VPS13B-210ENST00000521932 MYO1EQ12965 1108 aa8.96□□□□□ -0.98
VPS13B-210ENST00000521932 TRPC3Q13507 836 aa8.96□□□□□ -0.98
VPS13B-210ENST00000521932 MRPL58Q14197 206 aaKnown RBP8.96□□□□□ -0.98
VPS13B-210ENST00000521932 MAN2A1Q16706 1144 aa8.96□□□□□ -0.98
VPS13B-210ENST00000521932 USP41Q3LFD5 358 aa8.96□□□□□ -0.98
VPS13B-210ENST00000521932 SV2CQ496J9 727 aa8.96□□□□□ -0.98
VPS13B-210ENST00000521932 VWA3BQ502W6 1294 aa8.96□□□□□ -0.98
VPS13B-210ENST00000521932 HSP90AA4PQ58FG1 418 aa8.96□□□□□ -0.98
VPS13B-210ENST00000521932 PDE12Q6L8Q7 609 aaKnown RBP8.96□□□□□ -0.98
VPS13B-210ENST00000521932 DPH6Q7L8W6 267 aa8.96□□□□□ -0.98
VPS13B-210ENST00000521932 TAS1R1Q7RTX1 841 aa8.96□□□□□ -0.98
VPS13B-210ENST00000521932 APTXQ7Z2E3 356 aaKnown RBP8.96□□□□□ -0.98
VPS13B-210ENST00000521932 LUZP1Q86V48 1076 aa8.96□□□□□ -0.98
VPS13B-210ENST00000521932 CREBRFQ8IUR6 639 aa8.96□□□□□ -0.98
VPS13B-210ENST00000521932 VPS52Q8N1B4 723 aa8.96□□□□□ -0.98
VPS13B-210ENST00000521932 TAS1R2Q8TE23 839 aa8.96□□□□□ -0.98
VPS13B-210ENST00000521932 HASPINQ8TF76 798 aa8.96□□□□□ -0.98
VPS13B-210ENST00000521932 POF1BQ8WVV4 589 aa8.96□□□□□ -0.98
VPS13B-210ENST00000521932 HPDLQ96IR7 371 aa8.96□□□□□ -0.98
VPS13B-210ENST00000521932 HSH2DQ96JZ2 352 aa8.96□□□□□ -0.98
VPS13B-210ENST00000521932 ZNF560Q96MR9 790 aa8.96□□□□□ -0.98
VPS13B-210ENST00000521932 NDST4Q9H3R1 872 aa8.96□□□□□ -0.98
VPS13B-210ENST00000521932 RAB20Q9NX57 234 aa8.96□□□□□ -0.98
VPS13B-210ENST00000521932 LMCD1Q9NZU5 365 aa8.96□□□□□ -0.98
VPS13B-210ENST00000521932 MAGEC2Q9UBF1 373 aaPredicted RBP8.96□□□□□ -0.98
VPS13B-210ENST00000521932 LIMA1Q9UHB6 759 aaKnown RBP8.96□□□□□ -0.98
VPS13B-210ENST00000521932 R3HCC1Q9Y3T6 440 aaKnown RBP8.96□□□□□ -0.98
VPS13B-210ENST00000521932 NUB1Q9Y5A7 615 aa8.96□□□□□ -0.98
VPS13B-210ENST00000521932 SF3B1O75533 1304 aaKnown RBP eCLIP8.96□□□□□ -0.986e-6■■■■■ 103.4
VPS13B-210ENST00000521932 LOC100996750A0A140TA64 210 aa8.95□□□□□ -0.98
VPS13B-210ENST00000521932 GTPBP10A4D1E9 387 aaKnown RBP8.95□□□□□ -0.98
VPS13B-210ENST00000521932 FSCN2O14926 492 aa8.95□□□□□ -0.98
VPS13B-210ENST00000521932 GRM6O15303 877 aa8.95□□□□□ -0.98
VPS13B-210ENST00000521932 N4BP1O75113 896 aaKnown RBP8.95□□□□□ -0.98
VPS13B-210ENST00000521932 HLA-DRAP01903 254 aa8.95□□□□□ -0.98
VPS13B-210ENST00000521932 CTSAP10619 480 aa8.95□□□□□ -0.98
VPS13B-210ENST00000521932 ATP1A3P13637 1013 aa8.95□□□□□ -0.98
VPS13B-210ENST00000521932 CDK11BP21127 795 aaKnown RBP8.95□□□□□ -0.98
VPS13B-210ENST00000521932 MTIF2P46199 727 aaKnown RBP8.95□□□□□ -0.98
VPS13B-210ENST00000521932 ERVFC1P60507 584 aa8.95□□□□□ -0.98
VPS13B-210ENST00000521932 MYL6P60660 151 aa8.95□□□□□ -0.98
VPS13B-210ENST00000521932 DSG1Q02413 1049 aa8.95□□□□□ -0.98
VPS13B-210ENST00000521932 CETN1Q12798 172 aa8.95□□□□□ -0.98
VPS13B-210ENST00000521932 BIRC3Q13489 604 aa8.95□□□□□ -0.98
VPS13B-210ENST00000521932 KRT31Q15323 416 aa8.95□□□□□ -0.98
VPS13B-210ENST00000521932 KIAA0319Q5VV43 1072 aa8.95□□□□□ -0.98
VPS13B-210ENST00000521932 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.95□□□□□ -0.98
VPS13B-210ENST00000521932 MRPL43Q8N983 215 aaKnown RBP8.95□□□□□ -0.98
VPS13B-210ENST00000521932 LMO3Q8TAP4 145 aa8.95□□□□□ -0.98
VPS13B-210ENST00000521932 LNX1Q8TBB1 728 aaPredicted RBP8.95□□□□□ -0.98
VPS13B-210ENST00000521932 SPATA18Q8TC71 538 aa8.95□□□□□ -0.98
VPS13B-210ENST00000521932 SEMA4DQ92854 862 aa8.95□□□□□ -0.98
VPS13B-210ENST00000521932 MRPL38Q96DV4 380 aaKnown RBP8.95□□□□□ -0.98
VPS13B-210ENST00000521932 SENP8Q96LD8 212 aa8.95□□□□□ -0.98
VPS13B-210ENST00000521932 TTPALQ9BTX7 342 aa8.95□□□□□ -0.98
VPS13B-210ENST00000521932 KRTAP4-6Q9BYQ5 205 aa8.95□□□□□ -0.98
VPS13B-210ENST00000521932 PHACTR1Q9C0D0 580 aa8.95□□□□□ -0.98
VPS13B-210ENST00000521932 ZBP1Q9H171 429 aa8.95□□□□□ -0.98
VPS13B-210ENST00000521932 MMRN2Q9H8L6 949 aa8.95□□□□□ -0.98
VPS13B-210ENST00000521932 NGRNQ9NPE2 291 aaKnown RBP8.95□□□□□ -0.98
VPS13B-210ENST00000521932 TLR9Q9NR96 1032 aa8.95□□□□□ -0.98
VPS13B-210ENST00000521932 DSEQ9UL01 958 aa8.95□□□□□ -0.98
VPS13B-210ENST00000521932 SSX2IPQ9Y2D8 614 aa8.95□□□□□ -0.98
VPS13B-210ENST00000521932 KIAA1671Q9BY89 1806 aa8.95□□□□□ -0.98
VPS13B-210ENST00000521932 NLRC5Q86WI3 1866 aa8.95□□□□□ -0.98
VPS13B-210ENST00000521932 ARHGEF37A1IGU5 675 aa8.94□□□□□ -0.98
VPS13B-210ENST00000521932 RFXAPO00287 272 aa8.94□□□□□ -0.98
VPS13B-210ENST00000521932 CYB561D2O14569 222 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms