RNA–Protein interactions for RNA: ENST00000520865.5

CTNNA1-225, Transcript of catenin alpha 1, humanhuman

TSL 5

Gene CTNNA1, Length 557 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-225ENST00000520865 ORC4O43929 436 aa7.1□□□□□ -1.27
CTNNA1-225ENST00000520865 PCDHGA12O60330 932 aa7.1□□□□□ -1.27
CTNNA1-225ENST00000520865 MFAP3LO75121 409 aa7.1□□□□□ -1.27
CTNNA1-225ENST00000520865 CLASP2O75122 1294 aaKnown RBP7.1□□□□□ -1.27
CTNNA1-225ENST00000520865 HIP1RO75146 1068 aa7.1□□□□□ -1.27
CTNNA1-225ENST00000520865 PPP6R2O75170 966 aa7.1□□□□□ -1.27
CTNNA1-225ENST00000520865 H2AFYO75367 372 aaKnown RBP7.1□□□□□ -1.27
CTNNA1-225ENST00000520865 ULK1O75385 1050 aa7.1□□□□□ -1.27
CTNNA1-225ENST00000520865 ATP5HO75947 161 aa7.1□□□□□ -1.27
CTNNA1-225ENST00000520865 C4BPAP04003 597 aaKnown RBP7.1□□□□□ -1.27
CTNNA1-225ENST00000520865 PARP1P09874 1014 aaKnown RBP7.1□□□□□ -1.27
CTNNA1-225ENST00000520865 TMEM253P0C7T8 217 aa7.1□□□□□ -1.27
CTNNA1-225ENST00000520865 TCP1P17987 556 aaKnown RBP7.1□□□□□ -1.27
CTNNA1-225ENST00000520865 EPHA5P54756 1037 aa7.1□□□□□ -1.27
CTNNA1-225ENST00000520865 OCRLQ01968 901 aa7.1□□□□□ -1.27
CTNNA1-225ENST00000520865 SPAG1Q07617 926 aa7.1□□□□□ -1.27
CTNNA1-225ENST00000520865 KLF1Q13351 362 aaPredicted RBP7.1□□□□□ -1.27
CTNNA1-225ENST00000520865 MPP3Q13368 585 aa7.1□□□□□ -1.27
CTNNA1-225ENST00000520865 TUSC3Q13454 348 aa7.1□□□□□ -1.27
CTNNA1-225ENST00000520865 PRPF4BQ13523 1007 aaKnown RBP7.1□□□□□ -1.27
CTNNA1-225ENST00000520865 ODF1Q14990 250 aa7.1□□□□□ -1.27
CTNNA1-225ENST00000520865 STK38Q15208 465 aa7.1□□□□□ -1.27
CTNNA1-225ENST00000520865 TAF11Q15544 211 aa7.1□□□□□ -1.27
CTNNA1-225ENST00000520865 CLPPQ16740 277 aaPredicted RBP7.1□□□□□ -1.27
CTNNA1-225ENST00000520865 PTPN21Q16825 1174 aa7.1□□□□□ -1.27
CTNNA1-225ENST00000520865 IMMTQ16891 758 aaKnown RBP7.1□□□□□ -1.27
CTNNA1-225ENST00000520865 TTMPQ5BVD1 217 aa7.1□□□□□ -1.27
CTNNA1-225ENST00000520865 ANKRD20A2Q5SQ80 823 aa7.1□□□□□ -1.27
CTNNA1-225ENST00000520865 CATSPEREQ5SY80 951 aa7.1□□□□□ -1.27
CTNNA1-225ENST00000520865 GJC2Q5T442 439 aaPredicted RBP7.1□□□□□ -1.27
CTNNA1-225ENST00000520865 ANKRD20A1Q5TYW2 823 aa7.1□□□□□ -1.27
CTNNA1-225ENST00000520865 ANKRD20A3Q5VUR7 823 aa7.1□□□□□ -1.27
CTNNA1-225ENST00000520865 FAM173BQ6P4H8 233 aa7.1□□□□□ -1.27
CTNNA1-225ENST00000520865 CCDC129Q6ZRS4 1044 aa7.1□□□□□ -1.27
CTNNA1-225ENST00000520865 G2E3Q7L622 706 aa7.1□□□□□ -1.27
CTNNA1-225ENST00000520865 RSPH3Q86UC2 560 aa7.1□□□□□ -1.27
CTNNA1-225ENST00000520865 ZBTB46Q86UZ6 589 aa7.1□□□□□ -1.27
CTNNA1-225ENST00000520865 C11orf74Q86VG3 221 aa7.1□□□□□ -1.27
CTNNA1-225ENST00000520865 VSIG10LQ86VR7 867 aa7.1□□□□□ -1.27
CTNNA1-225ENST00000520865 WDR75Q8IWA0 830 aaKnown RBP7.1□□□□□ -1.27
CTNNA1-225ENST00000520865 DNAJC10Q8IXB1 793 aa7.1□□□□□ -1.27
CTNNA1-225ENST00000520865 NECAB1Q8N987 351 aa7.1□□□□□ -1.27
CTNNA1-225ENST00000520865 LINC00301Q8NCQ3 95 aa7.1□□□□□ -1.27
CTNNA1-225ENST00000520865 NSUN7Q8NE18 718 aaKnown RBP7.1□□□□□ -1.27
CTNNA1-225ENST00000520865 FLCNQ8NFG4 579 aa7.1□□□□□ -1.27
CTNNA1-225ENST00000520865 SSH3Q8TE77 659 aa7.1□□□□□ -1.27
CTNNA1-225ENST00000520865 RIN2Q8WYP3 895 aaPredicted RBP7.1□□□□□ -1.27
CTNNA1-225ENST00000520865 KIFAP3Q92845 792 aa7.1□□□□□ -1.27
CTNNA1-225ENST00000520865 MEIS3Q99687 375 aa7.1□□□□□ -1.27
CTNNA1-225ENST00000520865 SLF1Q9BQI6 1058 aa7.1□□□□□ -1.27
CTNNA1-225ENST00000520865 BRD8Q9H0E9 1235 aa7.1□□□□□ -1.27
CTNNA1-225ENST00000520865 NSRP1Q9H0G5 558 aaKnown RBP7.1□□□□□ -1.27
CTNNA1-225ENST00000520865 SIL1Q9H173 461 aa7.1□□□□□ -1.27
CTNNA1-225ENST00000520865 RABEP2Q9H5N1 569 aa7.1□□□□□ -1.27
CTNNA1-225ENST00000520865 KCNMB3Q9NPA1 279 aa7.1□□□□□ -1.27
CTNNA1-225ENST00000520865 TBCCD1Q9NVR7 557 aa7.1□□□□□ -1.27
CTNNA1-225ENST00000520865 IL1RAPL1Q9NZN1 696 aa7.1□□□□□ -1.27
CTNNA1-225ENST00000520865 TCEAL9Q9UHQ7 104 aa7.1□□□□□ -1.27
CTNNA1-225ENST00000520865 SCOCQ9UIL1 159 aa7.1□□□□□ -1.27
CTNNA1-225ENST00000520865 TSPYL4Q9UJ04 414 aa7.1□□□□□ -1.27
CTNNA1-225ENST00000520865 TMEM98Q9Y2Y6 226 aa7.1□□□□□ -1.27
CTNNA1-225ENST00000520865 PCDHGA9Q9Y5G4 932 aaKnown RBP7.1□□□□□ -1.27
CTNNA1-225ENST00000520865 PCDHGA8Q9Y5G5 932 aa7.1□□□□□ -1.27
CTNNA1-225ENST00000520865 PCDHGA7Q9Y5G6 932 aa7.1□□□□□ -1.27
CTNNA1-225ENST00000520865 PCDHGA6Q9Y5G7 932 aa7.1□□□□□ -1.27
CTNNA1-225ENST00000520865 PCDHGA3Q9Y5H0 932 aa7.1□□□□□ -1.27
CTNNA1-225ENST00000520865 PCDHGA2Q9Y5H1 932 aa7.1□□□□□ -1.27
CTNNA1-225ENST00000520865 HCFC2Q9Y5Z7 792 aa7.1□□□□□ -1.27
CTNNA1-225ENST00000520865 COMMD3-BMI1R4GMX3 469 aa7.1□□□□□ -1.27
CTNNA1-225ENST00000520865 C4AP0C0L4 1744 aa7.1□□□□□ -1.27
CTNNA1-225ENST00000520865 RFX7Q2KHR2 1363 aa7.09□□□□□ -1.27
CTNNA1-225ENST00000520865 NEDD4P46934 1319 aa7.09□□□□□ -1.27
CTNNA1-225ENST00000520865 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP7.09□□□□□ -1.27
CTNNA1-225ENST00000520865 A0A1B0GVL5 298 aa7.09□□□□□ -1.27
CTNNA1-225ENST00000520865 DPPA5A6NC42 116 aa7.09□□□□□ -1.27
CTNNA1-225ENST00000520865 IQCJ-SCHIP1C9J366 451 aaPredicted RBP7.09□□□□□ -1.27
CTNNA1-225ENST00000520865 ACOT7O00154 380 aa7.09□□□□□ -1.27
CTNNA1-225ENST00000520865 SPTLC2O15270 562 aa7.09□□□□□ -1.27
CTNNA1-225ENST00000520865 TPD52L2O43399 206 aaKnown RBP7.09□□□□□ -1.27
CTNNA1-225ENST00000520865 DIAPH2O60879 1101 aa7.09□□□□□ -1.27
CTNNA1-225ENST00000520865 ATP6V1G1O75348 118 aa7.09□□□□□ -1.27
CTNNA1-225ENST00000520865 RNASE1P07998 156 aaKnown RBP7.09□□□□□ -1.27
CTNNA1-225ENST00000520865 ATP1A3P13637 1013 aa7.09□□□□□ -1.27
CTNNA1-225ENST00000520865 NQO1P15559 274 aaKnown RBP7.09□□□□□ -1.27
CTNNA1-225ENST00000520865 SDHBP21912 280 aa7.09□□□□□ -1.27
CTNNA1-225ENST00000520865 SMARCA1P28370 1054 aa7.09□□□□□ -1.27
CTNNA1-225ENST00000520865 PBX1P40424 430 aa7.09□□□□□ -1.27
CTNNA1-225ENST00000520865 ACADVLP49748 655 aa7.09□□□□□ -1.27
CTNNA1-225ENST00000520865 SERPINB8P50452 374 aa7.09□□□□□ -1.27
CTNNA1-225ENST00000520865 CLCN2P51788 898 aa7.09□□□□□ -1.27
CTNNA1-225ENST00000520865 NDUFA8P51970 172 aa7.09□□□□□ -1.27
CTNNA1-225ENST00000520865 PHC1P78364 1004 aa7.09□□□□□ -1.27
CTNNA1-225ENST00000520865 SLC39A6Q13433 755 aa7.09□□□□□ -1.27
CTNNA1-225ENST00000520865 SPIDRQ14159 915 aa7.09□□□□□ -1.27
CTNNA1-225ENST00000520865 NR0B2Q15466 257 aa7.09□□□□□ -1.27
CTNNA1-225ENST00000520865 GSTA3Q16772 222 aa7.09□□□□□ -1.27
CTNNA1-225ENST00000520865 NT5DC1Q5TFE4 455 aa7.09□□□□□ -1.27
CTNNA1-225ENST00000520865 SLC23A3Q6PIS1 610 aa7.09□□□□□ -1.27
CTNNA1-225ENST00000520865 RAD9BQ6WBX8 426 aa7.09□□□□□ -1.27
CTNNA1-225ENST00000520865 Q6ZUG5 572 aa7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms