RNA–Protein interactions for RNA: ENST00000519362.5

SPIDR-210, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 1,807 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-210ENST00000519362 GINS2Q9Y248 185 aa13.04□□□□□ -0.32
SPIDR-210ENST00000519362 EFR3BQ9Y2G0 817 aa13.04□□□□□ -0.32
SPIDR-210ENST00000519362 CAND2O75155 1236 aa13.04□□□□□ -0.32
SPIDR-210ENST00000519362 KRT7P08729 469 aa13.04□□□□□ -0.32
SPIDR-210ENST00000519362 ATF7P17544 494 aaPredicted RBP13.04□□□□□ -0.32
SPIDR-210ENST00000519362 IL1R2P27930 398 aa13.04□□□□□ -0.32
SPIDR-210ENST00000519362 HPDP32754 393 aaPredicted RBP13.04□□□□□ -0.32
SPIDR-210ENST00000519362 LSP1P33241 339 aa13.04□□□□□ -0.32
SPIDR-210ENST00000519362 CHKAP35790 457 aa13.04□□□□□ -0.32
SPIDR-210ENST00000519362 HUNKP57058 714 aa13.04□□□□□ -0.32
SPIDR-210ENST00000519362 IRX5P78411 483 aaPredicted RBP13.04□□□□□ -0.32
SPIDR-210ENST00000519362 LMNB2Q03252 620 aa13.04□□□□□ -0.32
SPIDR-210ENST00000519362 ACAP1Q15027 740 aa13.04□□□□□ -0.32
SPIDR-210ENST00000519362 TAZQ16635 292 aa13.04□□□□□ -0.32
SPIDR-210ENST00000519362 KAZNQ674X7 775 aa13.04□□□□□ -0.32
SPIDR-210ENST00000519362 ZNF365Q70YC5 407 aa13.04□□□□□ -0.32
SPIDR-210ENST00000519362 CROCCP2Q86T23 111 aa13.04□□□□□ -0.32
SPIDR-210ENST00000519362 RASAL3Q86YV0 1011 aa13.04□□□□□ -0.32
SPIDR-210ENST00000519362 EMC1Q8N766 993 aa13.04□□□□□ -0.32
SPIDR-210ENST00000519362 BBOF1Q8ND07 529 aa13.04□□□□□ -0.32
SPIDR-210ENST00000519362 PPP1R13LQ8WUF5 828 aa13.04□□□□□ -0.32
SPIDR-210ENST00000519362 LENG1Q96BZ8 264 aaPredicted RBP13.04□□□□□ -0.32
SPIDR-210ENST00000519362 CDC42EP4Q9H3Q1 356 aaKnown RBP13.04□□□□□ -0.32
SPIDR-210ENST00000519362 SYNCQ9H7C4 482 aa13.04□□□□□ -0.32
SPIDR-210ENST00000519362 CNTN3Q9P232 1028 aa13.04□□□□□ -0.32
SPIDR-210ENST00000519362 BCCIPQ9P287 314 aaKnown RBP eCLIP13.04□□□□□ -0.32
SPIDR-210ENST00000519362 DNPEPQ9ULA0 475 aa13.04□□□□□ -0.32
SPIDR-210ENST00000519362 DRG1Q9Y295 367 aaKnown RBP13.04□□□□□ -0.32
SPIDR-210ENST00000519362 LRRD1A4D1F6 860 aa13.03□□□□□ -0.32
SPIDR-210ENST00000519362 SRRM3A6NNA2 597 aaPredicted RBP13.03□□□□□ -0.32
SPIDR-210ENST00000519362 PFKMP08237 780 aa13.03□□□□□ -0.32
SPIDR-210ENST00000519362 ADCY8P40145 1251 aa13.03□□□□□ -0.32
SPIDR-210ENST00000519362 PSEN2P49810 448 aa13.03□□□□□ -0.32
SPIDR-210ENST00000519362 MAGOHP61326 146 aaKnown RBP13.03□□□□□ -0.32
SPIDR-210ENST00000519362 PPP2R2AP63151 447 aa13.03□□□□□ -0.32
SPIDR-210ENST00000519362 BYSLQ13895 437 aaKnown RBP13.03□□□□□ -0.32
SPIDR-210ENST00000519362 OASLQ15646 514 aaKnown RBP13.03□□□□□ -0.32
SPIDR-210ENST00000519362 CCL14Q16627 93 aa13.03□□□□□ -0.32
SPIDR-210ENST00000519362 ZFYVE27Q5T4F4 411 aa13.03□□□□□ -0.32
SPIDR-210ENST00000519362 LRRC52Q8N7C0 313 aa13.03□□□□□ -0.32
SPIDR-210ENST00000519362 ACSF2Q96CM8 615 aaPredicted RBP13.03□□□□□ -0.32
SPIDR-210ENST00000519362 TUBGCP4Q9UGJ1 667 aa13.03□□□□□ -0.32
SPIDR-210ENST00000519362 TSPAN16Q9UKR8 245 aa13.03□□□□□ -0.32
SPIDR-210ENST00000519362 Q9Y3F1 56 aa13.03□□□□□ -0.32
SPIDR-210ENST00000519362 MANSC4A6NHS7 340 aaPredicted RBP13.02□□□□□ -0.32
SPIDR-210ENST00000519362 PPEF2O14830 753 aa13.02□□□□□ -0.32
SPIDR-210ENST00000519362 AXLP30530 894 aa13.02□□□□□ -0.32
SPIDR-210ENST00000519362 CPT1AP50416 773 aa13.02□□□□□ -0.32
SPIDR-210ENST00000519362 YARSP54577 528 aaKnown RBP13.02□□□□□ -0.32
SPIDR-210ENST00000519362 STILQ15468 1287 aa13.02□□□□□ -0.32
SPIDR-210ENST00000519362 HADHQ16836 314 aaKnown RBP13.02□□□□□ -0.32
SPIDR-210ENST00000519362 PKDCCQ504Y2 493 aa13.02□□□□□ -0.32
SPIDR-210ENST00000519362 TNFAIP8L3Q5GJ75 292 aa13.02□□□□□ -0.32
SPIDR-210ENST00000519362 C17orf99Q6UX52 265 aa13.02□□□□□ -0.32
SPIDR-210ENST00000519362 CCDC25Q86WR0 208 aa13.02□□□□□ -0.32
SPIDR-210ENST00000519362 RELL1Q8IUW5 271 aa13.02□□□□□ -0.32
SPIDR-210ENST00000519362 ALLCQ8N6M5 410 aa13.02□□□□□ -0.32
SPIDR-210ENST00000519362 UBA3Q8TBC4 463 aa13.02□□□□□ -0.32
SPIDR-210ENST00000519362 CCHCR1Q8TD31 782 aa13.02□□□□□ -0.32
SPIDR-210ENST00000519362 BCAS4Q8TDM0 211 aa13.02□□□□□ -0.32
SPIDR-210ENST00000519362 TMEM40Q8WWA1 233 aa13.02□□□□□ -0.32
SPIDR-210ENST00000519362 DNAJB3Q8WWF6 145 aa13.02□□□□□ -0.32
SPIDR-210ENST00000519362 NKD2Q969F2 451 aaPredicted RBP13.02□□□□□ -0.32
SPIDR-210ENST00000519362 MRPL45Q9BRJ2 306 aaKnown RBP13.02□□□□□ -0.32
SPIDR-210ENST00000519362 NXF3Q9H4D5 531 aaKnown RBP13.02□□□□□ -0.32
SPIDR-210ENST00000519362 ANAPC5Q9UJX4 755 aa13.02□□□□□ -0.32
SPIDR-210ENST00000519362 GJD2Q9UKL4 321 aa13.02□□□□□ -0.32
SPIDR-210ENST00000519362 HES2Q9Y543 173 aa13.02□□□□□ -0.32
SPIDR-210ENST00000519362 NME7Q9Y5B8 376 aa13.02□□□□□ -0.32
SPIDR-210ENST00000519362 DOCK3Q8IZD9 2030 aa13.02□□□□□ -0.33
SPIDR-210ENST00000519362 RECQL4O94761 1208 aa13.02□□□□□ -0.33
SPIDR-210ENST00000519362 ECM2O94769 699 aaPredicted RBP13.02□□□□□ -0.33
SPIDR-210ENST00000519362 ITGAVP06756 1048 aa13.02□□□□□ -0.33
SPIDR-210ENST00000519362 HOXC8P31273 242 aa13.02□□□□□ -0.33
SPIDR-210ENST00000519362 VPS41P49754 854 aa13.02□□□□□ -0.33
SPIDR-210ENST00000519362 VCPP55072 806 aaKnown RBP13.02□□□□□ -0.33
SPIDR-210ENST00000519362 SNX17Q15036 470 aa13.02□□□□□ -0.33
SPIDR-210ENST00000519362 TAF1CQ15572 869 aaPredicted RBP13.02□□□□□ -0.33
SPIDR-210ENST00000519362 ODF2Q5BJF6 829 aa13.02□□□□□ -0.33
SPIDR-210ENST00000519362 C6orf118Q5T5N4 469 aa13.02□□□□□ -0.33
SPIDR-210ENST00000519362 HIBCHQ6NVY1 386 aaPredicted RBP13.02□□□□□ -0.33
SPIDR-210ENST00000519362 C12orf29Q8N999 325 aa13.02□□□□□ -0.33
SPIDR-210ENST00000519362 BEST2Q8NFU1 509 aa13.02□□□□□ -0.33
SPIDR-210ENST00000519362 CMASQ8NFW8 434 aaPredicted RBP13.02□□□□□ -0.33
SPIDR-210ENST00000519362 SLC35B2Q8TB61 432 aa13.02□□□□□ -0.33
SPIDR-210ENST00000519362 IPO4Q8TEX9 1081 aaKnown RBP13.02□□□□□ -0.33
SPIDR-210ENST00000519362 C18orf25Q96B23 403 aaPredicted RBP13.02□□□□□ -0.33
SPIDR-210ENST00000519362 DDX23Q9BUQ8 820 aaKnown RBP13.02□□□□□ -0.33
SPIDR-210ENST00000519362 ROPN1BQ9BZX4 212 aaPredicted RBP13.02□□□□□ -0.33
SPIDR-210ENST00000519362 EPN3Q9H201 632 aa13.02□□□□□ -0.33
SPIDR-210ENST00000519362 ADAM7Q9H2U9 754 aa13.02□□□□□ -0.33
SPIDR-210ENST00000519362 ZWILCHQ9H900 591 aa13.02□□□□□ -0.33
SPIDR-210ENST00000519362 ROPN1Q9HAT0 212 aaPredicted RBP13.02□□□□□ -0.33
SPIDR-210ENST00000519362 SNX9Q9Y5X1 595 aa13.02□□□□□ -0.33
SPIDR-210ENST00000519362 TRIP11Q15643 1979 aa13.01□□□□□ -0.33
SPIDR-210ENST00000519362 TREHO43280 583 aa13.01□□□□□ -0.33
SPIDR-210ENST00000519362 TTC4O95801 387 aa13.01□□□□□ -0.33
SPIDR-210ENST00000519362 KDELR1P24390 212 aa13.01□□□□□ -0.33
SPIDR-210ENST00000519362 MIPP30301 263 aa13.01□□□□□ -0.33
SPIDR-210ENST00000519362 PCK1P35558 622 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms