RNA–Protein interactions for RNA: ENST00000519004.5

PABPC1-208, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2 BASIC

Gene PABPC1, Length 2,401 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-208ENST00000519004 UBAP1LF5GYI3 381 aa14.19□□□□□ -0.14
PABPC1-208ENST00000519004 IPO5O00410 1097 aaKnown RBP14.19□□□□□ -0.14
PABPC1-208ENST00000519004 NR3C1P04150 777 aa14.19□□□□□ -0.14
PABPC1-208ENST00000519004 FAM58BPP0C7Q3 252 aa14.19□□□□□ -0.14
PABPC1-208ENST00000519004 PLA2G4BP0C869 781 aa14.19□□□□□ -0.14
PABPC1-208ENST00000519004 POLR2MP0CAP2 368 aa14.19□□□□□ -0.14
PABPC1-208ENST00000519004 SERPINB6P35237 376 aa14.19□□□□□ -0.14
PABPC1-208ENST00000519004 ALDH3B2P48448 385 aa14.19□□□□□ -0.14
PABPC1-208ENST00000519004 NUP107P57740 925 aa14.19□□□□□ -0.14
PABPC1-208ENST00000519004 ARHGAP8P85298 464 aa14.19□□□□□ -0.14
PABPC1-208ENST00000519004 CD300CQ08708 224 aa14.19□□□□□ -0.14
PABPC1-208ENST00000519004 EFHC2Q5JST6 749 aa14.19□□□□□ -0.14
PABPC1-208ENST00000519004 RABGAP1LQ5R372 815 aa14.19□□□□□ -0.14
PABPC1-208ENST00000519004 NLRP10Q86W26 655 aa14.19□□□□□ -0.14
PABPC1-208ENST00000519004 ZMAT2Q96NC0 199 aaKnown RBP14.19□□□□□ -0.14
PABPC1-208ENST00000519004 KLF6Q99612 283 aaPredicted RBP14.19□□□□□ -0.14
PABPC1-208ENST00000519004 ASTN1O14525 1302 aa14.18□□□□□ -0.14
PABPC1-208ENST00000519004 MYH11P35749 1972 aa14.18□□□□□ -0.14
PABPC1-208ENST00000519004 GOLGA8RI6L899 631 aa14.18□□□□□ -0.14
PABPC1-208ENST00000519004 EML1O00423 815 aa14.18□□□□□ -0.14
PABPC1-208ENST00000519004 CALUO43852 315 aaPredicted RBP14.18□□□□□ -0.14
PABPC1-208ENST00000519004 ZNF23P17027 643 aa14.18□□□□□ -0.14
PABPC1-208ENST00000519004 CDH3P22223 829 aa14.18□□□□□ -0.14
PABPC1-208ENST00000519004 CIITAP33076 1130 aa14.18□□□□□ -0.14
PABPC1-208ENST00000519004 RPS3AP61247 264 aaKnown RBP14.18□□□□□ -0.14
PABPC1-208ENST00000519004 CNGA3Q16281 694 aa14.18□□□□□ -0.14
PABPC1-208ENST00000519004 ZNF746Q6NUN9 644 aaPredicted RBP14.18□□□□□ -0.14
PABPC1-208ENST00000519004 PGM2L1Q6PCE3 622 aa14.18□□□□□ -0.14
PABPC1-208ENST00000519004 CENPUQ71F23 418 aa14.18□□□□□ -0.14
PABPC1-208ENST00000519004 THEMISQ8N1K5 641 aaPredicted RBP14.18□□□□□ -0.14
PABPC1-208ENST00000519004 OGFOD1Q8N543 542 aa14.18□□□□□ -0.14
PABPC1-208ENST00000519004 CCDC89Q8N998 374 aa14.18□□□□□ -0.14
PABPC1-208ENST00000519004 ZNF564Q8TBZ8 553 aaPredicted RBP14.18□□□□□ -0.14
PABPC1-208ENST00000519004 JDP2Q8WYK2 163 aa14.18□□□□□ -0.14
PABPC1-208ENST00000519004 MXD3Q9BW11 206 aa14.18□□□□□ -0.14
PABPC1-208ENST00000519004 ZHX3Q9H4I2 956 aa14.18□□□□□ -0.14
PABPC1-208ENST00000519004 PPCSQ9HAB8 311 aa14.18□□□□□ -0.14
PABPC1-208ENST00000519004 F5H6K3 240 aa14.17□□□□□ -0.14
PABPC1-208ENST00000519004 PDXKO00764 312 aa14.17□□□□□ -0.14
PABPC1-208ENST00000519004 DGKIO75912 1065 aa14.17□□□□□ -0.14
PABPC1-208ENST00000519004 KLRC2P26717 231 aa14.17□□□□□ -0.14
PABPC1-208ENST00000519004 GNA11P29992 359 aa14.17□□□□□ -0.14
PABPC1-208ENST00000519004 ETV4P43268 484 aa14.17□□□□□ -0.14
PABPC1-208ENST00000519004 SLC5A3P53794 718 aa14.17□□□□□ -0.14
PABPC1-208ENST00000519004 ARHGAP44Q17R89 818 aa14.17□□□□□ -0.14
PABPC1-208ENST00000519004 RALGPS1Q5JS13 557 aa14.17□□□□□ -0.14
PABPC1-208ENST00000519004 HYIQ5T013 277 aa14.17□□□□□ -0.14
PABPC1-208ENST00000519004 NIPAL1Q6NVV3 410 aa14.17□□□□□ -0.14
PABPC1-208ENST00000519004 FASTKD5Q7L8L6 764 aaKnown RBP14.17□□□□□ -0.14
PABPC1-208ENST00000519004 SAMD3Q8N6K7 520 aa14.17□□□□□ -0.14
PABPC1-208ENST00000519004 TTC13Q8NBP0 860 aa14.17□□□□□ -0.14
PABPC1-208ENST00000519004 HIPK4Q8NE63 616 aa14.17□□□□□ -0.14
PABPC1-208ENST00000519004 CPVLQ9H3G5 476 aa14.17□□□□□ -0.14
PABPC1-208ENST00000519004 NRDE2Q9H7Z3 1164 aa14.17□□□□□ -0.14
PABPC1-208ENST00000519004 ATAD3AQ9NVI7 634 aa14.17□□□□□ -0.14
PABPC1-208ENST00000519004 RGPD5Q99666 1765 aa14.17□□□□□ -0.14
PABPC1-208ENST00000519004 LAMB2P55268 1798 aa14.17□□□□□ -0.14
PABPC1-208ENST00000519004 FOXN3O00409 490 aaPredicted RBP14.17□□□□□ -0.14
PABPC1-208ENST00000519004 TBC1D12O60347 775 aa14.17□□□□□ -0.14
PABPC1-208ENST00000519004 LRRN2O75325 713 aa14.17□□□□□ -0.14
PABPC1-208ENST00000519004 CYP2D6P10635 497 aa14.17□□□□□ -0.14
PABPC1-208ENST00000519004 EPHB1P54762 984 aa14.17□□□□□ -0.14
PABPC1-208ENST00000519004 TBCCQ15814 346 aa14.17□□□□□ -0.14
PABPC1-208ENST00000519004 BORCS5Q969J3 196 aa14.17□□□□□ -0.14
PABPC1-208ENST00000519004 CSRNP1Q96S65 589 aa14.17□□□□□ -0.14
PABPC1-208ENST00000519004 NUP85Q9BW27 656 aa14.17□□□□□ -0.14
PABPC1-208ENST00000519004 SCHIP1Q9P0W5 487 aaPredicted RBP14.17□□□□□ -0.14
PABPC1-208ENST00000519004 STRIP2Q9ULQ0 834 aa14.17□□□□□ -0.14
PABPC1-208ENST00000519004 PCDHB13Q9Y5F0 798 aa14.17□□□□□ -0.14
PABPC1-208ENST00000519004 CACNA1SQ13698 1873 aa14.17□□□□□ -0.14
PABPC1-208ENST00000519004 PDE8AO60658 829 aa14.16□□□□□ -0.14
PABPC1-208ENST00000519004 STAMBPO95630 424 aa14.16□□□□□ -0.14
PABPC1-208ENST00000519004 PHBP35232 272 aa14.16□□□□□ -0.14
PABPC1-208ENST00000519004 UBAP2LQ14157 1087 aaKnown RBP14.16□□□□□ -0.14
PABPC1-208ENST00000519004 CLEC16AQ2KHT3 1053 aa14.16□□□□□ -0.14
PABPC1-208ENST00000519004 ITPRIPL1Q6GPH6 555 aa14.16□□□□□ -0.14
PABPC1-208ENST00000519004 KBTBD6Q86V97 674 aa14.16□□□□□ -0.14
PABPC1-208ENST00000519004 SDR16C5Q8N3Y7 309 aa14.16□□□□□ -0.14
PABPC1-208ENST00000519004 RNF169Q8NCN4 708 aa14.16□□□□□ -0.14
PABPC1-208ENST00000519004 ACTRT2Q8TDY3 377 aa14.16□□□□□ -0.14
PABPC1-208ENST00000519004 GJA10Q969M2 543 aa14.16□□□□□ -0.14
PABPC1-208ENST00000519004 NSMCE3Q96MG7 304 aa14.16□□□□□ -0.14
PABPC1-208ENST00000519004 FAM118BQ9BPY3 351 aa14.16□□□□□ -0.14
PABPC1-208ENST00000519004 INTS2Q9H0H0 1204 aaKnown RBP14.16□□□□□ -0.14
PABPC1-208ENST00000519004 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.16□□□□□ -0.146e-20■□□□□ 10.8
PABPC1-208ENST00000519004 CNTN3Q9P232 1028 aa14.16□□□□□ -0.14
PABPC1-208ENST00000519004 IGSF9Q9P2J2 1179 aa14.16□□□□□ -0.14
PABPC1-208ENST00000519004 CLIC2O15247 247 aa14.16□□□□□ -0.14
PABPC1-208ENST00000519004 CNOT3O75175 753 aaKnown RBP14.16□□□□□ -0.14
PABPC1-208ENST00000519004 BAIAP3O94812 1187 aa14.16□□□□□ -0.14
PABPC1-208ENST00000519004 FMO5P49326 533 aa14.16□□□□□ -0.14
PABPC1-208ENST00000519004 ALDH18A1P54886 795 aaKnown RBP14.16□□□□□ -0.14
PABPC1-208ENST00000519004 CENPCQ03188 943 aa14.16□□□□□ -0.14
PABPC1-208ENST00000519004 MYBPC2Q14324 1141 aa14.16□□□□□ -0.14
PABPC1-208ENST00000519004 CCNG2Q16589 344 aa14.16□□□□□ -0.14
PABPC1-208ENST00000519004 NANOGP8Q6NSW7 305 aa14.16□□□□□ -0.14
PABPC1-208ENST00000519004 RTKN2Q8IZC4 609 aa14.16□□□□□ -0.14
PABPC1-208ENST00000519004 REXO1Q8N1G1 1221 aaKnown RBP14.16□□□□□ -0.14
PABPC1-208ENST00000519004 CHPT1Q8WUD6 406 aa14.16□□□□□ -0.14
PABPC1-208ENST00000519004 SREK1Q8WXA9 508 aaKnown RBP14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms