RNA–Protein interactions for RNA: ENST00000514421.1

CCL28-204, Transcript of C-C motif chemokine ligand 28, humanhuman

TSL 3

Gene CCL28, Length 577 nt, Biotype retained intron.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-204ENST00000514421 TRIM59Q8IWR1 403 aa8.88□□□□□ -0.99
CCL28-204ENST00000514421 REXO1L1PQ8IX06 675 aa8.88□□□□□ -0.99
CCL28-204ENST00000514421 ADGRF2Q8IZF7 708 aa8.88□□□□□ -0.99
CCL28-204ENST00000514421 GJD3Q8N144 294 aa8.88□□□□□ -0.99
CCL28-204ENST00000514421 ATAD1Q8NBU5 361 aa8.88□□□□□ -0.99
CCL28-204ENST00000514421 OR6B3Q8NGW1 331 aa8.88□□□□□ -0.99
CCL28-204ENST00000514421 OR10T2Q8NGX3 314 aa8.88□□□□□ -0.99
CCL28-204ENST00000514421 TAS1R2Q8TE23 839 aa8.88□□□□□ -0.99
CCL28-204ENST00000514421 KBTBD7Q8WVZ9 684 aa8.88□□□□□ -0.99
CCL28-204ENST00000514421 FAXDC2Q96IV6 333 aa8.88□□□□□ -0.99
CCL28-204ENST00000514421 RPGRIP1Q96KN7 1286 aa8.88□□□□□ -0.99
CCL28-204ENST00000514421 ZNF512Q96ME7 567 aaPredicted RBP8.88□□□□□ -0.99
CCL28-204ENST00000514421 TMEM209Q96SK2 561 aa8.88□□□□□ -0.99
CCL28-204ENST00000514421 IMPG2Q9BZV3 1241 aa8.88□□□□□ -0.99
CCL28-204ENST00000514421 SNX25Q9H3E2 840 aa8.88□□□□□ -0.99
CCL28-204ENST00000514421 NDST4Q9H3R1 872 aa8.88□□□□□ -0.99
CCL28-204ENST00000514421 MMRN2Q9H8L6 949 aa8.88□□□□□ -0.99
CCL28-204ENST00000514421 WDR6Q9NNW5 1121 aaKnown RBP8.88□□□□□ -0.99
CCL28-204ENST00000514421 SCUBE2Q9NQ36 999 aa8.88□□□□□ -0.99
CCL28-204ENST00000514421 ABHD10Q9NUJ1 306 aa8.88□□□□□ -0.99
CCL28-204ENST00000514421 RAB20Q9NX57 234 aa8.88□□□□□ -0.99
CCL28-204ENST00000514421 METRNQ9UJH8 293 aa8.88□□□□□ -0.99
CCL28-204ENST00000514421 CDH9Q9ULB4 789 aa8.88□□□□□ -0.99
CCL28-204ENST00000514421 SIK3Q9Y2K2 1263 aa8.88□□□□□ -0.99
CCL28-204ENST00000514421 SLC27A5Q9Y2P5 690 aa8.88□□□□□ -0.99
CCL28-204ENST00000514421 PCDHB5Q9Y5E4 795 aa8.88□□□□□ -0.99
CCL28-204ENST00000514421 MTMR11A4FU01 709 aa8.87□□□□□ -0.99
CCL28-204ENST00000514421 LOC730098B7Z3J9 87 aa8.87□□□□□ -0.99
CCL28-204ENST00000514421 RNF225M0QZC1 329 aaPredicted RBP8.87□□□□□ -0.99
CCL28-204ENST00000514421 PMM2O15305 246 aa8.87□□□□□ -0.99
CCL28-204ENST00000514421 ZSCAN12O43309 604 aa8.87□□□□□ -0.99
CCL28-204ENST00000514421 VNN2O95498 520 aa8.87□□□□□ -0.99
CCL28-204ENST00000514421 TNNT1P13805 278 aa8.87□□□□□ -0.99
CCL28-204ENST00000514421 ACAT1P24752 427 aaKnown RBP8.87□□□□□ -0.99
CCL28-204ENST00000514421 ALDH1A3P47895 512 aa8.87□□□□□ -0.99
CCL28-204ENST00000514421 MXI1P50539 228 aa8.87□□□□□ -0.99
CCL28-204ENST00000514421 CDH8P55286 799 aa8.87□□□□□ -0.99
CCL28-204ENST00000514421 ZP2Q05996 745 aa8.87□□□□□ -0.99
CCL28-204ENST00000514421 CETN1Q12798 172 aa8.87□□□□□ -0.99
CCL28-204ENST00000514421 PLD1Q13393 1074 aa8.87□□□□□ -0.99
CCL28-204ENST00000514421 DCAF17Q5H9S7 520 aaPredicted RBP8.87□□□□□ -0.99
CCL28-204ENST00000514421 WDR44Q5JSH3 913 aa8.87□□□□□ -0.99
CCL28-204ENST00000514421 INTS6LQ5JSJ4 861 aaKnown RBP8.87□□□□□ -0.99
CCL28-204ENST00000514421 IQCEQ6IPM2 695 aa8.87□□□□□ -0.99
CCL28-204ENST00000514421 FAM171BQ6P995 826 aa8.87□□□□□ -0.99
CCL28-204ENST00000514421 ZNF662Q6ZS27 426 aa8.87□□□□□ -0.99
CCL28-204ENST00000514421 OTOP3Q7RTS5 596 aa8.87□□□□□ -0.99
CCL28-204ENST00000514421 GRASPQ7Z6J2 395 aaPredicted RBP8.87□□□□□ -0.99
CCL28-204ENST00000514421 ELMOD1Q8N336 334 aa8.87□□□□□ -0.99
CCL28-204ENST00000514421 PLCD3Q8N3E9 789 aa8.87□□□□□ -0.99
CCL28-204ENST00000514421 FBXL13Q8NEE6 735 aa8.87□□□□□ -0.99
CCL28-204ENST00000514421 MYRIPQ8NFW9 859 aa8.87□□□□□ -0.99
CCL28-204ENST00000514421 OR8K1Q8NGG5 319 aa8.87□□□□□ -0.99
CCL28-204ENST00000514421 FEZF2Q8TBJ5 459 aa8.87□□□□□ -0.99
CCL28-204ENST00000514421 SPPL2BQ8TCT7 592 aa8.87□□□□□ -0.99
CCL28-204ENST00000514421 SLC35C1Q96A29 364 aa8.87□□□□□ -0.99
CCL28-204ENST00000514421 ACSF2Q96CM8 615 aaPredicted RBP8.87□□□□□ -0.99
CCL28-204ENST00000514421 NECAB3Q96P71 396 aaPredicted RBP8.87□□□□□ -0.99
CCL28-204ENST00000514421 PGLYRP2Q96PD5 576 aa8.87□□□□□ -0.99
CCL28-204ENST00000514421 MRPL45Q9BRJ2 306 aaKnown RBP8.87□□□□□ -0.99
CCL28-204ENST00000514421 COL25A1Q9BXS0 654 aaPredicted RBP8.87□□□□□ -0.99
CCL28-204ENST00000514421 POMKQ9H5K3 350 aa8.87□□□□□ -0.99
CCL28-204ENST00000514421 CYP3A43Q9HB55 503 aa8.87□□□□□ -0.99
CCL28-204ENST00000514421 CDH22Q9UJ99 828 aa8.87□□□□□ -0.99
CCL28-204ENST00000514421 GTF3C4Q9UKN8 822 aa8.87□□□□□ -0.99
CCL28-204ENST00000514421 POLIQ9UNA4 740 aa8.87□□□□□ -0.99
CCL28-204ENST00000514421 USTQ9Y2C2 406 aa8.87□□□□□ -0.99
CCL28-204ENST00000514421 PPP2R2CQ9Y2T4 447 aa8.87□□□□□ -0.99
CCL28-204ENST00000514421 COQ4Q9Y3A0 265 aa8.87□□□□□ -0.99
CCL28-204ENST00000514421 NR2E1Q9Y466 385 aa8.87□□□□□ -0.99
CCL28-204ENST00000514421 ASB3Q9Y575 518 aa8.87□□□□□ -0.99
CCL28-204ENST00000514421 INSL5Q9Y5Q6 135 aa8.87□□□□□ -0.99
CCL28-204ENST00000514421 REV3LO60673 3130 aa8.87□□□□□ -0.99
CCL28-204ENST00000514421 MYBPHLA2RUH7 354 aa8.86□□□□□ -0.99
CCL28-204ENST00000514421 A8MXQ7 604 aa8.86□□□□□ -0.99
CCL28-204ENST00000514421 DLL1O00548 723 aa8.86□□□□□ -0.99
CCL28-204ENST00000514421 P4HA2O15460 535 aa8.86□□□□□ -0.99
CCL28-204ENST00000514421 N4BP1O75113 896 aaKnown RBP8.86□□□□□ -0.99
CCL28-204ENST00000514421 CLSTN1O94985 981 aa8.86□□□□□ -0.99
CCL28-204ENST00000514421 HAPLN1P10915 354 aaPredicted RBP8.86□□□□□ -0.99
CCL28-204ENST00000514421 PTPN1P18031 435 aaKnown RBP8.86□□□□□ -0.99
CCL28-204ENST00000514421 SSTR3P32745 418 aaPredicted RBP8.86□□□□□ -0.99
CCL28-204ENST00000514421 PIK3CAP42336 1068 aa8.86□□□□□ -0.99
CCL28-204ENST00000514421 MTIF2P46199 727 aaKnown RBP8.86□□□□□ -0.99
CCL28-204ENST00000514421 FMO5P49326 533 aa8.86□□□□□ -0.99
CCL28-204ENST00000514421 EPHB3P54753 998 aa8.86□□□□□ -0.99
CCL28-204ENST00000514421 ZBED6P86452 979 aa8.86□□□□□ -0.99
CCL28-204ENST00000514421 TWF1Q12792 350 aa8.86□□□□□ -0.99
CCL28-204ENST00000514421 MAPRE1Q15691 268 aaKnown RBP8.86□□□□□ -0.99
CCL28-204ENST00000514421 PTPN21Q16825 1174 aa8.86□□□□□ -0.99
CCL28-204ENST00000514421 FKBP15Q5T1M5 1219 aa8.86□□□□□ -0.99
CCL28-204ENST00000514421 CYP4A22Q5TCH4 519 aa8.86□□□□□ -0.99
CCL28-204ENST00000514421 SPOPLQ6IQ16 392 aa8.86□□□□□ -0.99
CCL28-204ENST00000514421 TRIM65Q6PJ69 517 aa8.86□□□□□ -0.99
CCL28-204ENST00000514421 WDR59Q6PJI9 974 aa8.86□□□□□ -0.99
CCL28-204ENST00000514421 C4orf50Q6ZRC1 276 aa8.86□□□□□ -0.99
CCL28-204ENST00000514421 UNC93AQ86WB7 457 aa8.86□□□□□ -0.99
CCL28-204ENST00000514421 CREBRFQ8IUR6 639 aa8.86□□□□□ -0.99
CCL28-204ENST00000514421 SPATA2LQ8IUW3 424 aaPredicted RBP8.86□□□□□ -0.99
CCL28-204ENST00000514421 TTC39CQ8N584 583 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms