RNA–Protein interactions for RNA: ENST00000513341.5

PDLIM5-218, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-218ENST00000513341 KPNA6O60684 536 aa4.36□□□□□ -1.71
PDLIM5-218ENST00000513341 MAFO75444 373 aaPredicted RBP4.36□□□□□ -1.71
PDLIM5-218ENST00000513341 UBTFL1P0CB47 393 aaPredicted RBP4.36□□□□□ -1.71
PDLIM5-218ENST00000513341 ZNF37AP17032 561 aaPredicted RBP4.36□□□□□ -1.71
PDLIM5-218ENST00000513341 PLCD1P51178 756 aa4.36□□□□□ -1.71
PDLIM5-218ENST00000513341 OAZ1P54368 228 aa4.36□□□□□ -1.71
PDLIM5-218ENST00000513341 BEX3Q00994 111 aa4.36□□□□□ -1.71
PDLIM5-218ENST00000513341 SIGLEC14Q08ET2 396 aa4.36□□□□□ -1.71
PDLIM5-218ENST00000513341 TFCP2Q12800 502 aa4.36□□□□□ -1.71
PDLIM5-218ENST00000513341 RIN1Q13671 783 aa4.36□□□□□ -1.71
PDLIM5-218ENST00000513341 CCDC158Q5M9N0 1113 aa4.36□□□□□ -1.71
PDLIM5-218ENST00000513341 LCE1AQ5T7P2 110 aa4.36□□□□□ -1.71
PDLIM5-218ENST00000513341 NFRKBQ6P4R8 1299 aa4.36□□□□□ -1.71
PDLIM5-218ENST00000513341 Q6ZRM9 215 aa4.36□□□□□ -1.71
PDLIM5-218ENST00000513341 MICALCLQ6ZW33 695 aa4.36□□□□□ -1.71
PDLIM5-218ENST00000513341 ARMCX2Q7L311 632 aa4.36□□□□□ -1.71
PDLIM5-218ENST00000513341 CKAP2LQ8IYA6 745 aa4.36□□□□□ -1.71
PDLIM5-218ENST00000513341 NLGN4XQ8N0W4 816 aa4.36□□□□□ -1.71
PDLIM5-218ENST00000513341 REPS2Q8NFH8 660 aa4.36□□□□□ -1.71
PDLIM5-218ENST00000513341 AFAP1L1Q8TED9 768 aa4.36□□□□□ -1.71
PDLIM5-218ENST00000513341 THAP3Q8WTV1 239 aaPredicted RBP4.36□□□□□ -1.71
PDLIM5-218ENST00000513341 UBXN4Q92575 508 aa4.36□□□□□ -1.71
PDLIM5-218ENST00000513341 ANKS1AQ92625 1134 aa4.36□□□□□ -1.71
PDLIM5-218ENST00000513341 FSD1Q9BTV5 496 aa4.36□□□□□ -1.71
PDLIM5-218ENST00000513341 PHF20Q9BVI0 1012 aa4.36□□□□□ -1.71
PDLIM5-218ENST00000513341 EPN3Q9H201 632 aa4.36□□□□□ -1.71
PDLIM5-218ENST00000513341 PRKRIP1Q9H875 184 aaPredicted RBP4.36□□□□□ -1.71
PDLIM5-218ENST00000513341 SYNPO2LQ9H987 977 aa4.36□□□□□ -1.71
PDLIM5-218ENST00000513341 GPR108Q9NPR9 543 aa4.36□□□□□ -1.71
PDLIM5-218ENST00000513341 INCENPQ9NQS7 918 aa4.36□□□□□ -1.71
PDLIM5-218ENST00000513341 ARHGAP28Q9P2N2 729 aa4.36□□□□□ -1.71
PDLIM5-218ENST00000513341 Q9UFV3 132 aa4.36□□□□□ -1.71
PDLIM5-218ENST00000513341 SAP30BPQ9UHR5 308 aaKnown RBP4.36□□□□□ -1.71
PDLIM5-218ENST00000513341 MUTYHQ9UIF7 546 aa4.36□□□□□ -1.71
PDLIM5-218ENST00000513341 SIP14410 1827 aa4.36□□□□□ -1.71
PDLIM5-218ENST00000513341 PARP14Q460N5 1801 aa4.36□□□□□ -1.71
PDLIM5-218ENST00000513341 MYO15AQ9UKN7 3530 aa4.35□□□□□ -1.71
PDLIM5-218ENST00000513341 CHD8Q9HCK8 2581 aa4.35□□□□□ -1.71
PDLIM5-218ENST00000513341 SCN5AQ14524 2016 aa4.35□□□□□ -1.71
PDLIM5-218ENST00000513341 LOC102724159A0A0B4J2E5 919 aa4.35□□□□□ -1.71
PDLIM5-218ENST00000513341 LOC730098B7Z3J9 87 aa4.35□□□□□ -1.71
PDLIM5-218ENST00000513341 MPHOSPH10O00566 681 aaKnown RBP4.35□□□□□ -1.71
PDLIM5-218ENST00000513341 MBTPS2O43462 519 aa4.35□□□□□ -1.71
PDLIM5-218ENST00000513341 ZBED4O75132 1171 aa4.35□□□□□ -1.71
PDLIM5-218ENST00000513341 CXCL10P02778 98 aa4.35□□□□□ -1.71
PDLIM5-218ENST00000513341 RB1P06400 928 aa4.35□□□□□ -1.71
PDLIM5-218ENST00000513341 PTGS1P23219 599 aa4.35□□□□□ -1.71
PDLIM5-218ENST00000513341 CPT1AP50416 773 aa4.35□□□□□ -1.71
PDLIM5-218ENST00000513341 WDR5P61964 334 aaKnown RBP4.35□□□□□ -1.71
PDLIM5-218ENST00000513341 HTRA4P83105 476 aaPredicted RBP4.35□□□□□ -1.71
PDLIM5-218ENST00000513341 MTX1Q13505 466 aa4.35□□□□□ -1.71
PDLIM5-218ENST00000513341 PWP2Q15269 919 aaKnown RBP4.35□□□□□ -1.71
PDLIM5-218ENST00000513341 BRDTQ58F21 947 aaPredicted RBP4.35□□□□□ -1.71
PDLIM5-218ENST00000513341 KIAA1755Q5JYT7 1200 aa4.35□□□□□ -1.71
PDLIM5-218ENST00000513341 LY6G5CQ5SRR4 150 aa4.35□□□□□ -1.71
PDLIM5-218ENST00000513341 KANK2Q63ZY3 851 aa4.35□□□□□ -1.71
PDLIM5-218ENST00000513341 NOL8Q76FK4 1167 aaKnown RBP4.35□□□□□ -1.71
PDLIM5-218ENST00000513341 ASCL5Q7RTU5 278 aa4.35□□□□□ -1.71
PDLIM5-218ENST00000513341 FILIP1Q7Z7B0 1213 aa4.35□□□□□ -1.71
PDLIM5-218ENST00000513341 ADGRA1Q86SQ6 560 aa4.35□□□□□ -1.71
PDLIM5-218ENST00000513341 TLK2Q86UE8 772 aa4.35□□□□□ -1.71
PDLIM5-218ENST00000513341 FAM133AQ8N9E0 248 aa4.35□□□□□ -1.71
PDLIM5-218ENST00000513341 CAGE1Q8TC20 777 aa4.35□□□□□ -1.71
PDLIM5-218ENST00000513341 GDPD5Q8WTR4 605 aa4.35□□□□□ -1.71
PDLIM5-218ENST00000513341 DCAF4Q8WV16 495 aa4.35□□□□□ -1.71
PDLIM5-218ENST00000513341 NKD2Q969F2 451 aaPredicted RBP4.35□□□□□ -1.71
PDLIM5-218ENST00000513341 ANAPC16Q96DE5 110 aa4.35□□□□□ -1.71
PDLIM5-218ENST00000513341 TMEM176AQ96HP8 235 aa4.35□□□□□ -1.71
PDLIM5-218ENST00000513341 LMAN2LQ9H0V9 348 aa4.35□□□□□ -1.71
PDLIM5-218ENST00000513341 KANSL2Q9H9L4 492 aa4.35□□□□□ -1.71
PDLIM5-218ENST00000513341 TRPS1Q9UHF7 1281 aa4.35□□□□□ -1.71
PDLIM5-218ENST00000513341 HS3ST4Q9Y661 456 aa4.35□□□□□ -1.71
PDLIM5-218ENST00000513341 ASTN1O14525 1302 aa4.35□□□□□ -1.71
PDLIM5-218ENST00000513341 CACNA1GO43497 2377 aa4.35□□□□□ -1.71
PDLIM5-218ENST00000513341 PLXNA3P51805 1871 aa4.35□□□□□ -1.71
PDLIM5-218ENST00000513341 KMT2EQ8IZD2 1858 aa4.35□□□□□ -1.71
PDLIM5-218ENST00000513341 TRIP12Q14669 1992 aaPredicted RBP4.34□□□□□ -1.71
PDLIM5-218ENST00000513341 TET1Q8NFU7 2136 aa4.34□□□□□ -1.71
PDLIM5-218ENST00000513341 GVINP1Q7Z2Y8 2422 aa4.34□□□□□ -1.71
PDLIM5-218ENST00000513341 BAHCC1Q9P281 2608 aa4.34□□□□□ -1.71
PDLIM5-218ENST00000513341 CHD6Q8TD26 2715 aa4.34□□□□□ -1.71
PDLIM5-218ENST00000513341 LCHNA4D1U4 455 aa4.34□□□□□ -1.71
PDLIM5-218ENST00000513341 KRT37O76014 449 aa4.34□□□□□ -1.71
PDLIM5-218ENST00000513341 EYA4O95677 639 aa4.34□□□□□ -1.71
PDLIM5-218ENST00000513341 ITGB1P05556 798 aa4.34□□□□□ -1.71
PDLIM5-218ENST00000513341 CYP2C9P11712 490 aa4.34□□□□□ -1.71
PDLIM5-218ENST00000513341 AOAHP28039 575 aa4.34□□□□□ -1.71
PDLIM5-218ENST00000513341 DYNLL1P63167 89 aaKnown RBP4.34□□□□□ -1.71
PDLIM5-218ENST00000513341 ICA1Q05084 483 aa4.34□□□□□ -1.71
PDLIM5-218ENST00000513341 RBL2Q08999 1139 aa4.34□□□□□ -1.71
PDLIM5-218ENST00000513341 G3BP1Q13283 466 aaKnown RBP eCLIP4.34□□□□□ -1.71
PDLIM5-218ENST00000513341 ADAM15Q13444 863 aa4.34□□□□□ -1.71
PDLIM5-218ENST00000513341 GPM6BQ13491 265 aa4.34□□□□□ -1.71
PDLIM5-218ENST00000513341 PTPAQ15257 358 aa4.34□□□□□ -1.71
PDLIM5-218ENST00000513341 DUSP28Q4G0W2 176 aa4.34□□□□□ -1.71
PDLIM5-218ENST00000513341 EPC2Q52LR7 807 aa4.34□□□□□ -1.71
PDLIM5-218ENST00000513341 TCEAL5Q5H9L2 206 aa4.34□□□□□ -1.71
PDLIM5-218ENST00000513341 ZNF362Q5T0B9 420 aaPredicted RBP4.34□□□□□ -1.71
PDLIM5-218ENST00000513341 BTBD8Q5XKL5 378 aa4.34□□□□□ -1.71
PDLIM5-218ENST00000513341 SNRNP48Q6IEG0 339 aaKnown RBP4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms