RNA–Protein interactions for RNA: ENST00000513148.1

HMGCL-209, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 2

Gene HMGCL, Length 2,011 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-209ENST00000513148 RRAGAQ7L523 313 aa17.55■□□□□ 0.4
HMGCL-209ENST00000513148 ARHGEF19Q8IW93 802 aa17.55■□□□□ 0.4
HMGCL-209ENST00000513148 GPR161Q8N6U8 529 aaKnown RBP17.55■□□□□ 0.4
HMGCL-209ENST00000513148 C12orf76Q8N812 135 aaPredicted RBP17.55■□□□□ 0.4
HMGCL-209ENST00000513148 SPATA18Q8TC71 538 aa17.55■□□□□ 0.4
HMGCL-209ENST00000513148 HLA-CQ95604 372 aa17.55■□□□□ 0.4
HMGCL-209ENST00000513148 CLEC1BQ9P126 229 aa17.55■□□□□ 0.4
HMGCL-209ENST00000513148 FBXW11Q9UKB1 542 aa17.55■□□□□ 0.4
HMGCL-209ENST00000513148 GTF3C4Q9UKN8 822 aa17.55■□□□□ 0.4
HMGCL-209ENST00000513148 C5orf42Q9H799 3197 aa17.55■□□□□ 0.4
HMGCL-209ENST00000513148 TADA3O75528 432 aa17.55■□□□□ 0.4
HMGCL-209ENST00000513148 GTF2A1P52655 376 aaPredicted RBP17.55■□□□□ 0.4
HMGCL-209ENST00000513148 NDST1P52848 882 aa17.55■□□□□ 0.4
HMGCL-209ENST00000513148 GPR17Q13304 367 aa17.55■□□□□ 0.4
HMGCL-209ENST00000513148 CUL2Q13617 745 aa17.55■□□□□ 0.4
HMGCL-209ENST00000513148 COL19A1Q14993 1142 aa17.55■□□□□ 0.4
HMGCL-209ENST00000513148 LIN9Q5TKA1 542 aa17.55■□□□□ 0.4
HMGCL-209ENST00000513148 ATAD1Q8NBU5 361 aa17.55■□□□□ 0.4
HMGCL-209ENST00000513148 SLC7A14Q8TBB6 771 aa17.55■□□□□ 0.4
HMGCL-209ENST00000513148 LPIN3Q9BQK8 851 aa17.55■□□□□ 0.4
HMGCL-209ENST00000513148 CYP4F11Q9HBI6 524 aa17.55■□□□□ 0.4
HMGCL-209ENST00000513148 TMLHEQ9NVH6 421 aa17.55■□□□□ 0.4
HMGCL-209ENST00000513148 TRMT1Q9NXH9 659 aaKnown RBP17.55■□□□□ 0.4
HMGCL-209ENST00000513148 DNAI1Q9UI46 699 aa17.55■□□□□ 0.4
HMGCL-209ENST00000513148 PRRG1O14668 218 aa17.54■□□□□ 0.4
HMGCL-209ENST00000513148 RFPL2O75678 378 aa17.54■□□□□ 0.4
HMGCL-209ENST00000513148 ABLIM3O94929 683 aa17.54■□□□□ 0.4
HMGCL-209ENST00000513148 ATF2P15336 505 aa17.54■□□□□ 0.4
HMGCL-209ENST00000513148 ELF1P32519 619 aa17.54■□□□□ 0.4
HMGCL-209ENST00000513148 ZNF394Q53GI3 561 aa17.54■□□□□ 0.4
HMGCL-209ENST00000513148 DCP1BQ8IZD4 617 aaKnown RBP17.54■□□□□ 0.4
HMGCL-209ENST00000513148 TTC9BQ8N6N2 239 aa17.54■□□□□ 0.4
HMGCL-209ENST00000513148 NEK11Q8NG66 645 aa17.54■□□□□ 0.4
HMGCL-209ENST00000513148 FEZF2Q8TBJ5 459 aa17.54■□□□□ 0.4
HMGCL-209ENST00000513148 KAT5Q92993 513 aa17.54■□□□□ 0.4
HMGCL-209ENST00000513148 CYP3A43Q9HB55 503 aa17.54■□□□□ 0.4
HMGCL-209ENST00000513148 ABI2Q9NYB9 513 aaPredicted RBP17.54■□□□□ 0.4
HMGCL-209ENST00000513148 CDH9Q9ULB4 789 aa17.54■□□□□ 0.4
HMGCL-209ENST00000513148 UNC80Q8N2C7 3258 aa17.54■□□□□ 0.4
HMGCL-209ENST00000513148 MYBPHLA2RUH7 354 aa17.54■□□□□ 0.4
HMGCL-209ENST00000513148 GTPBP10A4D1E9 387 aaKnown RBP17.54■□□□□ 0.4
HMGCL-209ENST00000513148 MTMR11A4FU01 709 aa17.54■□□□□ 0.4
HMGCL-209ENST00000513148 SEC24AO95486 1093 aa17.54■□□□□ 0.4
HMGCL-209ENST00000513148 C8AP07357 584 aa17.54■□□□□ 0.4
HMGCL-209ENST00000513148 PON1P27169 355 aa17.54■□□□□ 0.4
HMGCL-209ENST00000513148 ACTN2P35609 894 aa17.54■□□□□ 0.4
HMGCL-209ENST00000513148 TFF2Q03403 129 aa17.54■□□□□ 0.4
HMGCL-209ENST00000513148 ARID5BQ14865 1188 aa17.54■□□□□ 0.4
HMGCL-209ENST00000513148 MDH1BQ5I0G3 518 aa17.54■□□□□ 0.4
HMGCL-209ENST00000513148 TPGS2Q68CL5 300 aa17.54■□□□□ 0.4
HMGCL-209ENST00000513148 PHLDB3Q6NSJ2 640 aa17.54■□□□□ 0.4
HMGCL-209ENST00000513148 ANKRD54Q6NXT1 300 aa17.54■□□□□ 0.4
HMGCL-209ENST00000513148 GJB7Q6PEY0 223 aa17.54■□□□□ 0.4
HMGCL-209ENST00000513148 TWNKQ96RR1 684 aa17.54■□□□□ 0.4
HMGCL-209ENST00000513148 CRTAC1Q9NQ79 661 aa17.54■□□□□ 0.4
HMGCL-209ENST00000513148 CISHQ9NSE2 258 aa17.54■□□□□ 0.4
HMGCL-209ENST00000513148 AFF4Q9UHB7 1163 aaKnown RBP17.54■□□□□ 0.4
HMGCL-209ENST00000513148 SLC27A5Q9Y2P5 690 aa17.54■□□□□ 0.4
HMGCL-209ENST00000513148 VNN2O95498 520 aa17.53■□□□□ 0.4
HMGCL-209ENST00000513148 DUSP4Q13115 394 aa17.53■□□□□ 0.4
HMGCL-209ENST00000513148 RARS2Q5T160 578 aaKnown RBP17.53■□□□□ 0.4
HMGCL-209ENST00000513148 FKBP15Q5T1M5 1219 aa17.53■□□□□ 0.4
HMGCL-209ENST00000513148 TMC5Q6UXY8 1006 aa17.53■□□□□ 0.4
HMGCL-209ENST00000513148 TMEM184AQ6ZMB5 413 aa17.53■□□□□ 0.4
HMGCL-209ENST00000513148 APTXQ7Z2E3 356 aaKnown RBP17.53■□□□□ 0.4
HMGCL-209ENST00000513148 ACOT1Q86TX2 421 aa17.53■□□□□ 0.4
HMGCL-209ENST00000513148 B3GALNT2Q8NCR0 500 aa17.53■□□□□ 0.4
HMGCL-209ENST00000513148 NCAPGQ9BPX3 1015 aa17.53■□□□□ 0.4
HMGCL-209ENST00000513148 CRISPLD1Q9H336 500 aa17.53■□□□□ 0.4
HMGCL-209ENST00000513148 PLEKHA4Q9H4M7 779 aa17.53■□□□□ 0.4
HMGCL-209ENST00000513148 DZANK1Q9NVP4 752 aa17.53■□□□□ 0.4
HMGCL-209ENST00000513148 DPP7Q9UHL4 492 aa17.53■□□□□ 0.4
HMGCL-209ENST00000513148 CDH22Q9UJ99 828 aa17.53■□□□□ 0.4
HMGCL-209ENST00000513148 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.52■□□□□ 0.4
HMGCL-209ENST00000513148 LGALS16A8MUM7 142 aa17.52■□□□□ 0.4
HMGCL-209ENST00000513148 SOAT2O75908 522 aa17.52■□□□□ 0.4
HMGCL-209ENST00000513148 FAM163BP0C2L3 166 aa17.52■□□□□ 0.4
HMGCL-209ENST00000513148 TBXAS1P24557 533 aaPredicted RBP17.52■□□□□ 0.4
HMGCL-209ENST00000513148 MAGEA9P43362 315 aa17.52■□□□□ 0.4
HMGCL-209ENST00000513148 CYP27A1Q02318 531 aa17.52■□□□□ 0.4
HMGCL-209ENST00000513148 INCA1Q0VD86 236 aa17.52■□□□□ 0.4
HMGCL-209ENST00000513148 SYCE2Q6PIF2 218 aa17.52■□□□□ 0.4
HMGCL-209ENST00000513148 ELMSAN1Q6PJG2 1045 aa17.52■□□□□ 0.4
HMGCL-209ENST00000513148 PKMYT1Q99640 499 aa17.52■□□□□ 0.4
HMGCL-209ENST00000513148 SEPT5Q99719 369 aaPredicted RBP17.52■□□□□ 0.4
HMGCL-209ENST00000513148 RHOBTB2Q9BYZ6 727 aa17.52■□□□□ 0.4
HMGCL-209ENST00000513148 UBE2TQ9NPD8 197 aaPredicted RBP17.52■□□□□ 0.4
HMGCL-209ENST00000513148 CILPO75339 1184 aa17.52■□□□□ 0.39
HMGCL-209ENST00000513148 SERPINC1P01008 464 aa17.52■□□□□ 0.39
HMGCL-209ENST00000513148 PTPN1P18031 435 aaKnown RBP17.52■□□□□ 0.39
HMGCL-209ENST00000513148 OAS2P29728 719 aaKnown RBP17.52■□□□□ 0.39
HMGCL-209ENST00000513148 KLK7P49862 253 aa17.52■□□□□ 0.39
HMGCL-209ENST00000513148 TUBB4BP68371 445 aa17.52■□□□□ 0.39
HMGCL-209ENST00000513148 UBXN1Q04323 297 aa17.52■□□□□ 0.39
HMGCL-209ENST00000513148 KCNMA1Q12791 1236 aa17.52■□□□□ 0.39
HMGCL-209ENST00000513148 PTPN21Q16825 1174 aa17.52■□□□□ 0.39
HMGCL-209ENST00000513148 PPM1LQ5SGD2 360 aa17.52■□□□□ 0.39
HMGCL-209ENST00000513148 CC2D1AQ6P1N0 951 aaPredicted RBP17.52■□□□□ 0.39
HMGCL-209ENST00000513148 REXO1L1PQ8IX06 675 aa17.52■□□□□ 0.39
HMGCL-209ENST00000513148 MNS1Q8NEH6 495 aa17.52■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms