RNA–Protein interactions for RNA: ENST00000513143.5

PDPN-210, Transcript of podoplanin, humanhuman

TSL 1 (best) BASIC

Gene PDPN, Length 1,305 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-210ENST00000513143 CAMK1Q14012 370 aa13.3□□□□□ -0.28
PDPN-210ENST00000513143 BMS1Q14692 1282 aaKnown RBP13.3□□□□□ -0.28
PDPN-210ENST00000513143 CCDC142Q17RM4 750 aa13.3□□□□□ -0.28
PDPN-210ENST00000513143 TAF3Q5VWG9 929 aa13.3□□□□□ -0.28
PDPN-210ENST00000513143 PAQR9Q6ZVX9 377 aa13.3□□□□□ -0.28
PDPN-210ENST00000513143 TMC7Q7Z402 723 aa13.3□□□□□ -0.28
PDPN-210ENST00000513143 CCDC170Q8IYT3 715 aa13.3□□□□□ -0.28
PDPN-210ENST00000513143 FUKQ8N0W3 1084 aa13.3□□□□□ -0.28
PDPN-210ENST00000513143 SLC30A5Q8TAD4 765 aa13.3□□□□□ -0.28
PDPN-210ENST00000513143 AUTS2Q8WXX7 1259 aa13.3□□□□□ -0.28
PDPN-210ENST00000513143 PCED1BQ96HM7 432 aa13.3□□□□□ -0.28
PDPN-210ENST00000513143 TCF25Q9BQ70 676 aa13.3□□□□□ -0.28
PDPN-210ENST00000513143 B3GNT5Q9BYG0 378 aa13.3□□□□□ -0.28
PDPN-210ENST00000513143 CERS4Q9HA82 394 aa13.3□□□□□ -0.28
PDPN-210ENST00000513143 TMLHEQ9NVH6 421 aa13.3□□□□□ -0.28
PDPN-210ENST00000513143 CDY1Q9Y6F8 540 aa13.3□□□□□ -0.28
PDPN-210ENST00000513143 MYO7AQ13402 2215 aa13.29□□□□□ -0.28
PDPN-210ENST00000513143 SOWAHDA6NJG2 315 aa13.29□□□□□ -0.28
PDPN-210ENST00000513143 DDX3XO00571 662 aaKnown RBP eCLIP13.29□□□□□ -0.28
PDPN-210ENST00000513143 ADAM12O43184 909 aa13.29□□□□□ -0.28
PDPN-210ENST00000513143 MICAL2O94851 1124 aa13.29□□□□□ -0.28
PDPN-210ENST00000513143 CFHP08603 1231 aa13.29□□□□□ -0.28
PDPN-210ENST00000513143 CCDC130P13994 396 aa13.29□□□□□ -0.28
PDPN-210ENST00000513143 RPL17P18621 184 aaKnown RBP13.29□□□□□ -0.28
PDPN-210ENST00000513143 OR1D2P34982 312 aa13.29□□□□□ -0.28
PDPN-210ENST00000513143 CCZ1BP86790 482 aa13.29□□□□□ -0.28
PDPN-210ENST00000513143 CCZ1P86791 482 aaPredicted RBP13.29□□□□□ -0.28
PDPN-210ENST00000513143 SMC1AQ14683 1233 aaKnown RBP13.29□□□□□ -0.28
PDPN-210ENST00000513143 NFE2Q16621 373 aaPredicted RBP13.29□□□□□ -0.28
PDPN-210ENST00000513143 SLC39A12Q504Y0 691 aa13.29□□□□□ -0.28
PDPN-210ENST00000513143 PKDCCQ504Y2 493 aa13.29□□□□□ -0.28
PDPN-210ENST00000513143 PRPF38BQ5VTL8 546 aaKnown RBP13.29□□□□□ -0.28
PDPN-210ENST00000513143 PDE12Q6L8Q7 609 aaKnown RBP13.29□□□□□ -0.28
PDPN-210ENST00000513143 TRIM72Q6ZMU5 477 aa13.29□□□□□ -0.28
PDPN-210ENST00000513143 VPS36Q86VN1 386 aa13.29□□□□□ -0.28
PDPN-210ENST00000513143 GLYCTKQ8IVS8 523 aa13.29□□□□□ -0.28
PDPN-210ENST00000513143 MRPL43Q8N983 215 aaKnown RBP13.29□□□□□ -0.28
PDPN-210ENST00000513143 ANKRD52Q8NB46 1076 aa13.29□□□□□ -0.28
PDPN-210ENST00000513143 SLC2A14Q8TDB8 520 aa13.29□□□□□ -0.28
PDPN-210ENST00000513143 ARNTL2Q8WYA1 636 aa13.29□□□□□ -0.28
PDPN-210ENST00000513143 MYLPFQ96A32 169 aa13.29□□□□□ -0.28
PDPN-210ENST00000513143 CCDC42Q96M95 316 aa13.29□□□□□ -0.28
PDPN-210ENST00000513143 PCDHB18PQ96TA0 734 aa13.29□□□□□ -0.28
PDPN-210ENST00000513143 LMAN2LQ9H0V9 348 aa13.29□□□□□ -0.28
PDPN-210ENST00000513143 LHX5Q9H2C1 402 aa13.29□□□□□ -0.28
PDPN-210ENST00000513143 KCNF1Q9H3M0 494 aa13.29□□□□□ -0.28
PDPN-210ENST00000513143 NGRNQ9NPE2 291 aaKnown RBP13.29□□□□□ -0.28
PDPN-210ENST00000513143 ENTPD7Q9NQZ7 604 aa13.29□□□□□ -0.28
PDPN-210ENST00000513143 TSPAN16Q9UKR8 245 aa13.29□□□□□ -0.28
PDPN-210ENST00000513143 TRIOBPQ9H2D6 2365 aa13.29□□□□□ -0.28
PDPN-210ENST00000513143 COL4A4P53420 1690 aaPredicted RBP13.28□□□□□ -0.28
PDPN-210ENST00000513143 A0A087X0T9 212 aa13.28□□□□□ -0.28
PDPN-210ENST00000513143 EPOPA6NHQ4 379 aa13.28□□□□□ -0.28
PDPN-210ENST00000513143 CLDN5O00501 218 aa13.28□□□□□ -0.28
PDPN-210ENST00000513143 TEX28O15482 410 aa13.28□□□□□ -0.28
PDPN-210ENST00000513143 CYP1A1P04798 512 aaPredicted RBP13.28□□□□□ -0.28
PDPN-210ENST00000513143 CNPP09543 421 aaKnown RBP13.28□□□□□ -0.28
PDPN-210ENST00000513143 FAM228BP0C875 321 aa13.28□□□□□ -0.28
PDPN-210ENST00000513143 CPB1P15086 417 aa13.28□□□□□ -0.28
PDPN-210ENST00000513143 ADORA2BP29275 332 aa13.28□□□□□ -0.28
PDPN-210ENST00000513143 SSTR3P32745 418 aaPredicted RBP13.28□□□□□ -0.28
PDPN-210ENST00000513143 CDH5P33151 784 aaPredicted RBP13.28□□□□□ -0.28
PDPN-210ENST00000513143 NDUFV1P49821 464 aa13.28□□□□□ -0.28
PDPN-210ENST00000513143 KIF11P52732 1056 aa13.28□□□□□ -0.28
PDPN-210ENST00000513143 ARPP19P56211 112 aa13.28□□□□□ -0.28
PDPN-210ENST00000513143 ROR1Q01973 937 aa13.28□□□□□ -0.28
PDPN-210ENST00000513143 CYP27A1Q02318 531 aa13.28□□□□□ -0.28
PDPN-210ENST00000513143 RAB33AQ14088 237 aa13.28□□□□□ -0.28
PDPN-210ENST00000513143 SLC18A3Q16572 532 aa13.28□□□□□ -0.28
PDPN-210ENST00000513143 GOLGA7BQ2TAP0 167 aa13.28□□□□□ -0.28
PDPN-210ENST00000513143 CFAP221Q4G0U5 840 aa13.28□□□□□ -0.28
PDPN-210ENST00000513143 DENND1BQ6P3S1 775 aa13.28□□□□□ -0.28
PDPN-210ENST00000513143 RAD9BQ6WBX8 426 aa13.28□□□□□ -0.28
PDPN-210ENST00000513143 C4orf50Q6ZRC1 276 aa13.28□□□□□ -0.28
PDPN-210ENST00000513143 TTC30AQ86WT1 665 aa13.28□□□□□ -0.28
PDPN-210ENST00000513143 C2orf15Q8WU43 125 aaKnown RBP13.28□□□□□ -0.28
PDPN-210ENST00000513143 FUBP3Q96I24 572 aaKnown RBP eCLIP13.28□□□□□ -0.28
PDPN-210ENST00000513143 EMILIN2Q9BXX0 1053 aa13.28□□□□□ -0.28
PDPN-210ENST00000513143 ZNF518BQ9C0D4 1074 aa13.28□□□□□ -0.28
PDPN-210ENST00000513143 PDCL3Q9H2J4 239 aa13.28□□□□□ -0.28
PDPN-210ENST00000513143 DEF6Q9H4E7 631 aa13.28□□□□□ -0.28
PDPN-210ENST00000513143 HESX1Q9UBX0 185 aa13.28□□□□□ -0.28
PDPN-210ENST00000513143 ADAMTS1Q9UHI8 967 aa13.28□□□□□ -0.28
PDPN-210ENST00000513143 MTCL1Q9Y4B5 1905 aaKnown RBP13.28□□□□□ -0.28
PDPN-210ENST00000513143 PLXNA3P51805 1871 aa13.27□□□□□ -0.29
PDPN-210ENST00000513143 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.27□□□□□ -0.29
PDPN-210ENST00000513143 WDR27A2RRH5 827 aa13.27□□□□□ -0.29
PDPN-210ENST00000513143 MTMR11A4FU01 709 aa13.27□□□□□ -0.29
PDPN-210ENST00000513143 C2orf71A6NGG8 1288 aa13.27□□□□□ -0.29
PDPN-210ENST00000513143 HIDE1A8MVS5 230 aa13.27□□□□□ -0.29
PDPN-210ENST00000513143 M0QYV0 167 aa13.27□□□□□ -0.29
PDPN-210ENST00000513143 ARHGAP6O43182 974 aa13.27□□□□□ -0.29
PDPN-210ENST00000513143 NRDCO43847 1150 aa13.27□□□□□ -0.29
PDPN-210ENST00000513143 AKR1B10O60218 316 aa13.27□□□□□ -0.29
PDPN-210ENST00000513143 ABLIM3O94929 683 aa13.27□□□□□ -0.29
PDPN-210ENST00000513143 LCA5LO95447 670 aa13.27□□□□□ -0.29
PDPN-210ENST00000513143 LSM8O95777 96 aaKnown RBP13.27□□□□□ -0.29
PDPN-210ENST00000513143 UNGP13051 313 aaPredicted RBP13.27□□□□□ -0.29
PDPN-210ENST00000513143 IRS1P35568 1242 aa13.27□□□□□ -0.29
PDPN-210ENST00000513143 CYLC1P35663 651 aaPredicted RBP13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms