RNA–Protein interactions for RNA: ENST00000508848.5

POLR2J3-213, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 5

Gene POLR2J3, Length 1,030 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-213ENST00000508848 NOL4O94818 638 aa11.29□□□□□ -0.6
POLR2J3-213ENST00000508848 AFPP02771 609 aaKnown RBP11.29□□□□□ -0.6
POLR2J3-213ENST00000508848 WEE2P0C1S8 567 aa11.29□□□□□ -0.6
POLR2J3-213ENST00000508848 HMGA1P17096 107 aaKnown RBP11.29□□□□□ -0.6
POLR2J3-213ENST00000508848 DDX6P26196 483 aaKnown RBP eCLIP11.29□□□□□ -0.6
POLR2J3-213ENST00000508848 SSTR3P32745 418 aaPredicted RBP11.29□□□□□ -0.6
POLR2J3-213ENST00000508848 YWHAEP62258 255 aaKnown RBP11.29□□□□□ -0.6
POLR2J3-213ENST00000508848 PTPN21Q16825 1174 aa11.29□□□□□ -0.6
POLR2J3-213ENST00000508848 KLHL40Q2TBA0 621 aa11.29□□□□□ -0.6
POLR2J3-213ENST00000508848 SKOR2Q2VWA4 1001 aaPredicted RBP11.29□□□□□ -0.6
POLR2J3-213ENST00000508848 DPCR1Q3MIW9 517 aa11.29□□□□□ -0.6
POLR2J3-213ENST00000508848 TCERG1LQ5VWI1 586 aa11.29□□□□□ -0.6
POLR2J3-213ENST00000508848 SASS6Q6UVJ0 657 aa11.29□□□□□ -0.6
POLR2J3-213ENST00000508848 MTSS1LQ765P7 747 aa11.29□□□□□ -0.6
POLR2J3-213ENST00000508848 PDZD4Q76G19 769 aaPredicted RBP11.29□□□□□ -0.6
POLR2J3-213ENST00000508848 BMP8AQ7Z5Y6 402 aa11.29□□□□□ -0.6
POLR2J3-213ENST00000508848 TMC8Q8IU68 726 aa11.29□□□□□ -0.6
POLR2J3-213ENST00000508848 KIAA1958Q8N8K9 716 aa11.29□□□□□ -0.6
POLR2J3-213ENST00000508848 EHBP1Q8NDI1 1231 aa11.29□□□□□ -0.6
POLR2J3-213ENST00000508848 EDAQ92838 391 aa11.29□□□□□ -0.6
POLR2J3-213ENST00000508848 SEMA4DQ92854 862 aa11.29□□□□□ -0.6
POLR2J3-213ENST00000508848 PCED1BQ96HM7 432 aa11.29□□□□□ -0.6
POLR2J3-213ENST00000508848 NECAB3Q96P71 396 aaPredicted RBP11.29□□□□□ -0.6
POLR2J3-213ENST00000508848 PGLYRP2Q96PD5 576 aa11.29□□□□□ -0.6
POLR2J3-213ENST00000508848 MYADMQ96S97 322 aa11.29□□□□□ -0.6
POLR2J3-213ENST00000508848 TTLL2Q9BWV7 592 aa11.29□□□□□ -0.6
POLR2J3-213ENST00000508848 NT5C1AQ9BXI3 368 aa11.29□□□□□ -0.6
POLR2J3-213ENST00000508848 C1QTNF1Q9BXJ1 281 aa11.29□□□□□ -0.6
POLR2J3-213ENST00000508848 UBXN6Q9BZV1 441 aa11.29□□□□□ -0.6
POLR2J3-213ENST00000508848 APOBEC3GQ9HC16 384 aaKnown RBP11.29□□□□□ -0.6
POLR2J3-213ENST00000508848 PNPLA8Q9NP80 782 aa11.29□□□□□ -0.6
POLR2J3-213ENST00000508848 IL37Q9NZH6 218 aa11.29□□□□□ -0.6
POLR2J3-213ENST00000508848 SORCS3Q9UPU3 1222 aa11.29□□□□□ -0.6
POLR2J3-213ENST00000508848 CNTN6Q9UQ52 1028 aa11.29□□□□□ -0.6
POLR2J3-213ENST00000508848 SLC27A5Q9Y2P5 690 aa11.29□□□□□ -0.6
POLR2J3-213ENST00000508848 MRPS23Q9Y3D9 190 aaKnown RBP11.29□□□□□ -0.6
POLR2J3-213ENST00000508848 NME7Q9Y5B8 376 aa11.29□□□□□ -0.6
POLR2J3-213ENST00000508848 ATP8B3O60423 1300 aa11.29□□□□□ -0.6
POLR2J3-213ENST00000508848 TECTAO75443 2155 aa11.28□□□□□ -0.6
POLR2J3-213ENST00000508848 ATP2C2O75185 946 aa11.28□□□□□ -0.6
POLR2J3-213ENST00000508848 PDGFRBP09619 1106 aa11.28□□□□□ -0.6
POLR2J3-213ENST00000508848 ATF6P18850 670 aa11.28□□□□□ -0.6
POLR2J3-213ENST00000508848 CYP2F1P24903 491 aa11.28□□□□□ -0.6
POLR2J3-213ENST00000508848 EEF1GP26641 437 aaKnown RBP11.28□□□□□ -0.6
POLR2J3-213ENST00000508848 CDC25CP30307 473 aa11.28□□□□□ -0.6
POLR2J3-213ENST00000508848 CDH8P55286 799 aa11.28□□□□□ -0.6
POLR2J3-213ENST00000508848 STX17P56962 302 aa11.28□□□□□ -0.6
POLR2J3-213ENST00000508848 GCNT1Q02742 428 aa11.28□□□□□ -0.6
POLR2J3-213ENST00000508848 TDGQ13569 410 aa11.28□□□□□ -0.6
POLR2J3-213ENST00000508848 MGAT5BQ3V5L5 792 aa11.28□□□□□ -0.6
POLR2J3-213ENST00000508848 ENOSF1Q7L5Y1 443 aa11.28□□□□□ -0.6
POLR2J3-213ENST00000508848 NPAS3Q8IXF0 933 aa11.28□□□□□ -0.6
POLR2J3-213ENST00000508848 HNRNPABQ99729 332 aaKnown RBP11.28□□□□□ -0.6
POLR2J3-213ENST00000508848 BPIFA3Q9BQP9 254 aa11.28□□□□□ -0.6
POLR2J3-213ENST00000508848 CORO1BQ9BR76 489 aa11.28□□□□□ -0.6
POLR2J3-213ENST00000508848 SDCBP2Q9H190 292 aa11.28□□□□□ -0.6
POLR2J3-213ENST00000508848 SMYD3Q9H7B4 428 aa11.28□□□□□ -0.6
POLR2J3-213ENST00000508848 KCNK12Q9HB15 430 aa11.28□□□□□ -0.6
POLR2J3-213ENST00000508848 HCFC1R1Q9NWW0 138 aa11.28□□□□□ -0.6
POLR2J3-213ENST00000508848 OBP2AQ9NY56 170 aa11.28□□□□□ -0.6
POLR2J3-213ENST00000508848 ABI2Q9NYB9 513 aaPredicted RBP11.28□□□□□ -0.6
POLR2J3-213ENST00000508848 LIMD1Q9UGP4 676 aa11.28□□□□□ -0.6
POLR2J3-213ENST00000508848 CDH22Q9UJ99 828 aa11.28□□□□□ -0.6
POLR2J3-213ENST00000508848 POLIQ9UNA4 740 aa11.28□□□□□ -0.6
POLR2J3-213ENST00000508848 NCANO14594 1321 aa11.28□□□□□ -0.6
POLR2J3-213ENST00000508848 OBSL1O75147 1896 aa11.27□□□□□ -0.6
POLR2J3-213ENST00000508848 NUP210Q8TEM1 1887 aaPredicted RBP11.27□□□□□ -0.6
POLR2J3-213ENST00000508848 FAM92AA1XBS5 289 aa11.27□□□□□ -0.61
POLR2J3-213ENST00000508848 TULP1O00294 542 aaPredicted RBP11.27□□□□□ -0.61
POLR2J3-213ENST00000508848 MOSPD3O75425 235 aa11.27□□□□□ -0.61
POLR2J3-213ENST00000508848 ECI2O75521 394 aa11.27□□□□□ -0.61
POLR2J3-213ENST00000508848 CAVIN2O95810 425 aa11.27□□□□□ -0.61
POLR2J3-213ENST00000508848 F11P03951 625 aa11.27□□□□□ -0.61
POLR2J3-213ENST00000508848 ACAT1P24752 427 aaKnown RBP11.27□□□□□ -0.61
POLR2J3-213ENST00000508848 NDST1P52848 882 aa11.27□□□□□ -0.61
POLR2J3-213ENST00000508848 MLLT6P55198 1093 aaPredicted RBP11.27□□□□□ -0.61
POLR2J3-213ENST00000508848 ZXDAP98168 799 aa11.27□□□□□ -0.61
POLR2J3-213ENST00000508848 CUL2Q13617 745 aa11.27□□□□□ -0.61
POLR2J3-213ENST00000508848 HTR4Q13639 388 aa11.27□□□□□ -0.61
POLR2J3-213ENST00000508848 MAN2A1Q16706 1144 aa11.27□□□□□ -0.61
POLR2J3-213ENST00000508848 DCAF17Q5H9S7 520 aaPredicted RBP11.27□□□□□ -0.61
POLR2J3-213ENST00000508848 PAQR9Q6ZVX9 377 aa11.27□□□□□ -0.61
POLR2J3-213ENST00000508848 GAREM2Q75VX8 874 aa11.27□□□□□ -0.61
POLR2J3-213ENST00000508848 FUKQ8N0W3 1084 aa11.27□□□□□ -0.61
POLR2J3-213ENST00000508848 SLC44A3Q8N4M1 653 aa11.27□□□□□ -0.61
POLR2J3-213ENST00000508848 ZNF276Q8N554 614 aa11.27□□□□□ -0.61
POLR2J3-213ENST00000508848 TTC9BQ8N6N2 239 aa11.27□□□□□ -0.61
POLR2J3-213ENST00000508848 ITFG1Q8TB96 612 aa11.27□□□□□ -0.61
POLR2J3-213ENST00000508848 FEZF2Q8TBJ5 459 aa11.27□□□□□ -0.61
POLR2J3-213ENST00000508848 WHAMMQ8TF30 809 aa11.27□□□□□ -0.61
POLR2J3-213ENST00000508848 OVCA2Q8WZ82 227 aa11.27□□□□□ -0.61
POLR2J3-213ENST00000508848 ELSPBP1Q96BH3 223 aa11.27□□□□□ -0.61
POLR2J3-213ENST00000508848 SMARCD1Q96GM5 515 aa11.27□□□□□ -0.61
POLR2J3-213ENST00000508848 CNOT6LQ96LI5 555 aaKnown RBP11.27□□□□□ -0.61
POLR2J3-213ENST00000508848 NT5C1BQ96P26 610 aa11.27□□□□□ -0.61
POLR2J3-213ENST00000508848 PI4K2AQ9BTU6 479 aa11.27□□□□□ -0.61
POLR2J3-213ENST00000508848 B3GNT5Q9BYG0 378 aa11.27□□□□□ -0.61
POLR2J3-213ENST00000508848 IL21Q9HBE4 155 aa11.27□□□□□ -0.61
POLR2J3-213ENST00000508848 TRPV5Q9NQA5 729 aa11.27□□□□□ -0.61
POLR2J3-213ENST00000508848 SLC2A4RGQ9NR83 387 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms