RNA–Protein interactions for RNA: ENST00000508312.5

DDR1-262, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene DDR1, Length 3,073 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-262ENST00000508312 BOLA2-SMG1P6H3BVE0 249 aa13.31□□□□□ -0.28
DDR1-262ENST00000508312 RGS2P41220 211 aa13.31□□□□□ -0.28
DDR1-262ENST00000508312 MRPS9P82933 396 aaKnown RBP13.31□□□□□ -0.28
DDR1-262ENST00000508312 ASPHQ12797 758 aa13.31□□□□□ -0.28
DDR1-262ENST00000508312 BFSP1Q12934 665 aa13.31□□□□□ -0.28
DDR1-262ENST00000508312 GRAMD1BQ3KR37 738 aa13.31□□□□□ -0.28
DDR1-262ENST00000508312 SEZ6Q53EL9 994 aa13.31□□□□□ -0.28
DDR1-262ENST00000508312 PCNX4Q63HM2 1172 aa13.31□□□□□ -0.28
DDR1-262ENST00000508312 ACAD11Q709F0 780 aa13.31□□□□□ -0.28
DDR1-262ENST00000508312 SAMD7Q7Z3H4 446 aa13.31□□□□□ -0.28
DDR1-262ENST00000508312 PCDHB18PQ96TA0 734 aa13.31□□□□□ -0.28
DDR1-262ENST00000508312 NAP1L4Q99733 375 aaKnown RBP13.31□□□□□ -0.28
DDR1-262ENST00000508312 TEKT3Q9BXF9 490 aa13.31□□□□□ -0.28
DDR1-262ENST00000508312 GLT8D2Q9H1C3 349 aa13.31□□□□□ -0.28
DDR1-262ENST00000508312 STK32BQ9NY57 414 aa13.31□□□□□ -0.28
DDR1-262ENST00000508312 PPARGC1AQ9UBK2 798 aaKnown RBP13.31□□□□□ -0.28
DDR1-262ENST00000508312 NRXN2Q9P2S2 1712 aa13.31□□□□□ -0.28
DDR1-262ENST00000508312 TBX3O15119 743 aa13.31□□□□□ -0.28
DDR1-262ENST00000508312 ADRB2P07550 413 aa13.31□□□□□ -0.28
DDR1-262ENST00000508312 LMNB2Q03252 620 aa13.31□□□□□ -0.28
DDR1-262ENST00000508312 FASTKD3Q14CZ7 662 aaKnown RBP13.31□□□□□ -0.28
DDR1-262ENST00000508312 ALYREFQ86V81 257 aaKnown RBP13.31□□□□□ -0.28
DDR1-262ENST00000508312 SLC26A7Q8TE54 656 aa13.31□□□□□ -0.28
DDR1-262ENST00000508312 LZICQ8WZA0 190 aa13.31□□□□□ -0.28
DDR1-262ENST00000508312 TTC17Q96AE7 1141 aa13.31□□□□□ -0.28
DDR1-262ENST00000508312 CCDC124Q96CT7 223 aaKnown RBP13.31□□□□□ -0.28
DDR1-262ENST00000508312 ZNF668Q96K58 619 aaPredicted RBP13.31□□□□□ -0.28
DDR1-262ENST00000508312 PANX3Q96QZ0 392 aa13.31□□□□□ -0.28
DDR1-262ENST00000508312 MAK16Q9BXY0 300 aaKnown RBP13.31□□□□□ -0.28
DDR1-262ENST00000508312 NMUR2Q9GZQ4 415 aa13.31□□□□□ -0.28
DDR1-262ENST00000508312 BTBD7Q9P203 1132 aa13.31□□□□□ -0.28
DDR1-262ENST00000508312 TCEAL9Q9UHQ7 104 aa13.31□□□□□ -0.28
DDR1-262ENST00000508312 R3HDM2Q9Y2K5 976 aaKnown RBP13.31□□□□□ -0.28
DDR1-262ENST00000508312 TCEA3O75764 348 aa13.31□□□□□ -0.28
DDR1-262ENST00000508312 MYL2P10916 166 aa13.31□□□□□ -0.28
DDR1-262ENST00000508312 HOXA7P31268 230 aaPredicted RBP13.31□□□□□ -0.28
DDR1-262ENST00000508312 HIRAP54198 1017 aaPredicted RBP13.31□□□□□ -0.28
DDR1-262ENST00000508312 DLG1Q12959 904 aa13.31□□□□□ -0.28
DDR1-262ENST00000508312 RASA2Q15283 850 aa13.31□□□□□ -0.28
DDR1-262ENST00000508312 TMEM259Q4ZIN3 620 aa13.31□□□□□ -0.28
DDR1-262ENST00000508312 LRRC8BQ6P9F7 803 aa13.31□□□□□ -0.28
DDR1-262ENST00000508312 RSBN1LQ6PCB5 846 aaPredicted RBP13.31□□□□□ -0.28
DDR1-262ENST00000508312 B3GNT6Q6ZMB0 384 aa13.31□□□□□ -0.28
DDR1-262ENST00000508312 DEFB132Q7Z7B7 95 aa13.31□□□□□ -0.28
DDR1-262ENST00000508312 PASD1Q8IV76 773 aa13.31□□□□□ -0.28
DDR1-262ENST00000508312 ZC3H3Q8IXZ2 948 aaKnown RBP13.31□□□□□ -0.28
DDR1-262ENST00000508312 GRK7Q8WTQ7 553 aa13.31□□□□□ -0.28
DDR1-262ENST00000508312 HSPBAP1Q96EW2 488 aa13.31□□□□□ -0.28
DDR1-262ENST00000508312 TTC25Q96NG3 672 aa13.31□□□□□ -0.28
DDR1-262ENST00000508312 NACC1Q96RE7 527 aa13.31□□□□□ -0.28
DDR1-262ENST00000508312 CCDC28BQ9BUN5 200 aa13.31□□□□□ -0.28
DDR1-262ENST00000508312 MANSC1Q9H8J5 431 aa13.31□□□□□ -0.28
DDR1-262ENST00000508312 SH3GLB1Q9Y371 365 aa13.31□□□□□ -0.28
DDR1-262ENST00000508312 GOLGA8SH3BPF8 625 aa13.3□□□□□ -0.28
DDR1-262ENST00000508312 GOLGA8MH3BSY2 632 aa13.3□□□□□ -0.28
DDR1-262ENST00000508312 PRPF4O43172 522 aaKnown RBP eCLIP13.3□□□□□ -0.28
DDR1-262ENST00000508312 VIL1P09327 827 aaKnown RBP13.3□□□□□ -0.28
DDR1-262ENST00000508312 AQP4P55087 323 aa13.3□□□□□ -0.28
DDR1-262ENST00000508312 RPS6P62753 249 aaKnown RBP13.3□□□□□ -0.28
DDR1-262ENST00000508312 CAV1Q03135 178 aa13.3□□□□□ -0.28
DDR1-262ENST00000508312 RASA3Q14644 834 aa13.3□□□□□ -0.28
DDR1-262ENST00000508312 XKR9Q5GH70 373 aa13.3□□□□□ -0.28
DDR1-262ENST00000508312 SH3D19Q5HYK7 790 aa13.3□□□□□ -0.28
DDR1-262ENST00000508312 ZBED8Q8IZ13 594 aa13.3□□□□□ -0.28
DDR1-262ENST00000508312 ZBTB8BQ8NAP8 495 aaPredicted RBP13.3□□□□□ -0.28
DDR1-262ENST00000508312 RBM15BQ8NDT2 890 aaKnown RBP13.3□□□□□ -0.28
DDR1-262ENST00000508312 SEMA4DQ92854 862 aa13.3□□□□□ -0.28
DDR1-262ENST00000508312 DGCR14Q96DF8 476 aaKnown RBP13.3□□□□□ -0.28
DDR1-262ENST00000508312 GRIP2Q9C0E4 1043 aa13.3□□□□□ -0.28
DDR1-262ENST00000508312 OLFML3Q9NRN5 406 aa13.3□□□□□ -0.28
DDR1-262ENST00000508312 CIDEBQ9UHD4 219 aa13.3□□□□□ -0.28
DDR1-262ENST00000508312 USTQ9Y2C2 406 aa13.3□□□□□ -0.28
DDR1-262ENST00000508312 ZNF536O15090 1300 aa13.3□□□□□ -0.28
DDR1-262ENST00000508312 SMIM31A0A1B0GVY4 71 aa13.3□□□□□ -0.28
DDR1-262ENST00000508312 RARBP10826 455 aa13.3□□□□□ -0.28
DDR1-262ENST00000508312 DPEP1P16444 411 aa13.3□□□□□ -0.28
DDR1-262ENST00000508312 IVDP26440 423 aa13.3□□□□□ -0.28
DDR1-262ENST00000508312 SERPINB6P35237 376 aa13.3□□□□□ -0.28
DDR1-262ENST00000508312 CAP2P40123 477 aa13.3□□□□□ -0.28
DDR1-262ENST00000508312 CDK16Q00536 496 aa13.3□□□□□ -0.28
DDR1-262ENST00000508312 SFT2D3Q587I9 215 aa13.3□□□□□ -0.28
DDR1-262ENST00000508312 ANKMY2Q8IV38 441 aa13.3□□□□□ -0.28
DDR1-262ENST00000508312 PIP4K2CQ8TBX8 421 aa13.3□□□□□ -0.28
DDR1-262ENST00000508312 TCP10LQ8TDR4 215 aa13.3□□□□□ -0.28
DDR1-262ENST00000508312 FAF1Q9UNN5 650 aaPredicted RBP13.3□□□□□ -0.28
DDR1-262ENST00000508312 FOCADQ5VW36 1801 aa13.29□□□□□ -0.28
DDR1-262ENST00000508312 MEI4A8MW99 385 aa13.29□□□□□ -0.28
DDR1-262ENST00000508312 WNT10BO00744 389 aa13.29□□□□□ -0.28
DDR1-262ENST00000508312 DKC1O60832 514 aaKnown RBP eCLIP13.29□□□□□ -0.28
DDR1-262ENST00000508312 ENTPD3O75355 529 aa13.29□□□□□ -0.28
DDR1-262ENST00000508312 CRABP2P29373 138 aa13.29□□□□□ -0.28
DDR1-262ENST00000508312 EPHB1P54762 984 aa13.29□□□□□ -0.28
DDR1-262ENST00000508312 NOP14P78316 857 aaKnown RBP13.29□□□□□ -0.28
DDR1-262ENST00000508312 MTMR1Q13613 665 aa13.29□□□□□ -0.28
DDR1-262ENST00000508312 PTK6Q13882 451 aa13.29□□□□□ -0.28
DDR1-262ENST00000508312 PDK3Q15120 406 aa13.29□□□□□ -0.28
DDR1-262ENST00000508312 TRIP10Q15642 601 aa13.29□□□□□ -0.28
DDR1-262ENST00000508312 MOXD1Q6UVY6 613 aa13.29□□□□□ -0.28
DDR1-262ENST00000508312 NOP9Q86U38 636 aaKnown RBP13.29□□□□□ -0.28
DDR1-262ENST00000508312 ULK2Q8IYT8 1036 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms