RNA–Protein interactions for RNA: ENST00000506104.1

SNF8-204, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 455 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-204ENST00000506104 SYCP3Q8IZU3 236 aa8.88□□□□□ -0.99
SNF8-204ENST00000506104 PGBD3Q8N328 593 aa8.88□□□□□ -0.99
SNF8-204ENST00000506104 ARL14EPQ8N8R7 260 aaPredicted RBP8.88□□□□□ -0.99
SNF8-204ENST00000506104 TSTD1Q8NFU3 115 aa8.88□□□□□ -0.99
SNF8-204ENST00000506104 C2orf15Q8WU43 125 aaKnown RBP8.88□□□□□ -0.99
SNF8-204ENST00000506104 PIGKQ92643 395 aa8.88□□□□□ -0.99
SNF8-204ENST00000506104 ACDQ96AP0 544 aa8.88□□□□□ -0.99
SNF8-204ENST00000506104 LOXL4Q96JB6 756 aa8.88□□□□□ -0.99
SNF8-204ENST00000506104 FAM84AQ96KN4 292 aa8.88□□□□□ -0.99
SNF8-204ENST00000506104 FAM213AQ9BRX8 229 aa8.88□□□□□ -0.99
SNF8-204ENST00000506104 IKZF4Q9H2S9 585 aa8.88□□□□□ -0.99
SNF8-204ENST00000506104 KIF9Q9HAQ2 790 aa8.88□□□□□ -0.99
SNF8-204ENST00000506104 FBRSL1Q9HCM7 1045 aaKnown RBP8.88□□□□□ -0.99
SNF8-204ENST00000506104 DDX43Q9NXZ2 648 aaKnown RBP8.88□□□□□ -0.99
SNF8-204ENST00000506104 PPP4R2Q9NY27 417 aa8.88□□□□□ -0.99
SNF8-204ENST00000506104 BCCIPQ9P287 314 aaKnown RBP eCLIP8.88□□□□□ -0.99
SNF8-204ENST00000506104 KIAA1549LQ6ZVL6 1849 aa8.88□□□□□ -0.99
SNF8-204ENST00000506104 TRDMT1O14717 391 aaKnown RBP8.87□□□□□ -0.99
SNF8-204ENST00000506104 KHNYNO15037 678 aaKnown RBP8.87□□□□□ -0.99
SNF8-204ENST00000506104 F11P03951 625 aa8.87□□□□□ -0.99
SNF8-204ENST00000506104 ITGB3P05106 788 aa8.87□□□□□ -0.99
SNF8-204ENST00000506104 CYP11A1P05108 521 aa8.87□□□□□ -0.99
SNF8-204ENST00000506104 USP17L7P0C7H9 530 aa8.87□□□□□ -0.99
SNF8-204ENST00000506104 IDEP14735 1019 aa8.87□□□□□ -0.99
SNF8-204ENST00000506104 PAX3P23760 479 aa8.87□□□□□ -0.99
SNF8-204ENST00000506104 DDX6P26196 483 aaKnown RBP eCLIP8.87□□□□□ -0.99
SNF8-204ENST00000506104 GJA4P35212 333 aa8.87□□□□□ -0.99
SNF8-204ENST00000506104 RAP1GAPP47736 663 aa8.87□□□□□ -0.99
SNF8-204ENST00000506104 NFE2Q16621 373 aaPredicted RBP8.87□□□□□ -0.99
SNF8-204ENST00000506104 USP39Q53GS9 565 aaKnown RBP8.87□□□□□ -0.99
SNF8-204ENST00000506104 HYIQ5T013 277 aa8.87□□□□□ -0.99
SNF8-204ENST00000506104 ANO7Q6IWH7 933 aa8.87□□□□□ -0.99
SNF8-204ENST00000506104 MON1AQ86VX9 555 aa8.87□□□□□ -0.99
SNF8-204ENST00000506104 EFCAB13Q8IY85 973 aa8.87□□□□□ -0.99
SNF8-204ENST00000506104 CAMKK1Q8N5S9 505 aa8.87□□□□□ -0.99
SNF8-204ENST00000506104 CSGALNACT2Q8N6G5 542 aa8.87□□□□□ -0.99
SNF8-204ENST00000506104 FSIP1Q8NA03 581 aa8.87□□□□□ -0.99
SNF8-204ENST00000506104 CACTINQ8WUQ7 758 aaKnown RBP8.87□□□□□ -0.99
SNF8-204ENST00000506104 RAD54LQ92698 747 aa8.87□□□□□ -0.99
SNF8-204ENST00000506104 ATP2A3Q93084 1043 aa8.87□□□□□ -0.99
SNF8-204ENST00000506104 ERLEC1Q96DZ1 483 aa8.87□□□□□ -0.99
SNF8-204ENST00000506104 TSPAN18Q96SJ8 248 aa8.87□□□□□ -0.99
SNF8-204ENST00000506104 FAM83CQ9BQN1 747 aa8.87□□□□□ -0.99
SNF8-204ENST00000506104 DUSP15Q9H1R2 295 aaPredicted RBP8.87□□□□□ -0.99
SNF8-204ENST00000506104 PCIF1Q9H4Z3 704 aa8.87□□□□□ -0.99
SNF8-204ENST00000506104 ASB7Q9H672 318 aa8.87□□□□□ -0.99
SNF8-204ENST00000506104 ECT2Q9H8V3 914 aa8.87□□□□□ -0.99
SNF8-204ENST00000506104 MRPL44Q9H9J2 332 aaKnown RBP8.87□□□□□ -0.99
SNF8-204ENST00000506104 HSFX1Q9UBD0 423 aa8.87□□□□□ -0.99
SNF8-204ENST00000506104 UXTQ9UBK9 157 aaPredicted RBP8.87□□□□□ -0.99
SNF8-204ENST00000506104 GTF3C4Q9UKN8 822 aa8.87□□□□□ -0.99
SNF8-204ENST00000506104 DERAQ9Y315 318 aa8.87□□□□□ -0.99
SNF8-204ENST00000506104 SNX9Q9Y5X1 595 aa8.87□□□□□ -0.99
SNF8-204ENST00000506104 EPG5Q9HCE0 2579 aa8.86□□□□□ -0.99
SNF8-204ENST00000506104 ANO9A1A5B4 782 aa8.86□□□□□ -0.99
SNF8-204ENST00000506104 C2orf78A6NCI8 922 aa8.86□□□□□ -0.99
SNF8-204ENST00000506104 C1QTNF9BB2RNN3 333 aa8.86□□□□□ -0.99
SNF8-204ENST00000506104 PATE3B3GLJ2 98 aa8.86□□□□□ -0.99
SNF8-204ENST00000506104 HCRTO43612 131 aa8.86□□□□□ -0.99
SNF8-204ENST00000506104 FAM189A1O60320 539 aa8.86□□□□□ -0.99
SNF8-204ENST00000506104 IL18RAPO95256 599 aa8.86□□□□□ -0.99
SNF8-204ENST00000506104 GCNT3O95395 438 aa8.86□□□□□ -0.99
SNF8-204ENST00000506104 PIGRP01833 764 aa8.86□□□□□ -0.99
SNF8-204ENST00000506104 TMEM191BP0C7N4 346 aa8.86□□□□□ -0.99
SNF8-204ENST00000506104 C1QTNF9P0C862 333 aa8.86□□□□□ -0.99
SNF8-204ENST00000506104 HDCP19113 662 aa8.86□□□□□ -0.99
SNF8-204ENST00000506104 ANXA13P27216 316 aa8.86□□□□□ -0.99
SNF8-204ENST00000506104 PMLP29590 882 aa8.86□□□□□ -0.99
SNF8-204ENST00000506104 HOXA6P31267 233 aa8.86□□□□□ -0.99
SNF8-204ENST00000506104 DDIT3P35638 169 aa8.86□□□□□ -0.99
SNF8-204ENST00000506104 GRIK1P39086 918 aa8.86□□□□□ -0.99
SNF8-204ENST00000506104 PNPLA4P41247 253 aa8.86□□□□□ -0.99
SNF8-204ENST00000506104 MAPK8P45983 427 aa8.86□□□□□ -0.99
SNF8-204ENST00000506104 LIMK1P53667 647 aa8.86□□□□□ -0.99
SNF8-204ENST00000506104 PSMC1P62191 440 aaKnown RBP8.86□□□□□ -0.99
SNF8-204ENST00000506104 CYP27A1Q02318 531 aa8.86□□□□□ -0.99
SNF8-204ENST00000506104 FAM160A1Q05DH4 1040 aa8.86□□□□□ -0.99
SNF8-204ENST00000506104 KDSRQ06136 332 aa8.86□□□□□ -0.99
SNF8-204ENST00000506104 SMARCB1Q12824 385 aa8.86□□□□□ -0.99
SNF8-204ENST00000506104 CCDC142Q17RM4 750 aa8.86□□□□□ -0.99
SNF8-204ENST00000506104 FBXO43Q4G163 708 aa8.86□□□□□ -0.99
SNF8-204ENST00000506104 SH3PXD2AQ5TCZ1 1133 aa8.86□□□□□ -0.99
SNF8-204ENST00000506104 LMBRD2Q68DH5 695 aaPredicted RBP8.86□□□□□ -0.99
SNF8-204ENST00000506104 PDCL2Q8N4E4 241 aa8.86□□□□□ -0.99
SNF8-204ENST00000506104 SH3RF2Q8TEC5 729 aa8.86□□□□□ -0.99
SNF8-204ENST00000506104 RLN3Q8WXF3 142 aa8.86□□□□□ -0.99
SNF8-204ENST00000506104 LARP4BQ92615 738 aaKnown RBP8.86□□□□□ -0.99
SNF8-204ENST00000506104 SLC22A12Q96S37 553 aa8.86□□□□□ -0.99
SNF8-204ENST00000506104 LSM14BQ9BX40 385 aaKnown RBP8.86□□□□□ -0.99
SNF8-204ENST00000506104 LINC00597Q9H2U6 94 aa8.86□□□□□ -0.99
SNF8-204ENST00000506104 BLOC1S4Q9NUP1 217 aa8.86□□□□□ -0.99
SNF8-204ENST00000506104 SMPD4Q9NXE4 827 aa8.86□□□□□ -0.99
SNF8-204ENST00000506104 ZMYM5Q9UJ78 669 aa8.86□□□□□ -0.99
SNF8-204ENST00000506104 EXOC7Q9UPT5 735 aa8.86□□□□□ -0.99
SNF8-204ENST00000506104 SMC3Q9UQE7 1217 aa8.86□□□□□ -0.99
SNF8-204ENST00000506104 C2CD2Q9Y426 696 aa8.86□□□□□ -0.99
SNF8-204ENST00000506104 PCDHGA5Q9Y5G8 931 aa8.86□□□□□ -0.99
SNF8-204ENST00000506104 CACNA1GO43497 2377 aa8.86□□□□□ -0.99
SNF8-204ENST00000506104 ATXN2Q99700 1313 aaKnown RBP8.85□□□□□ -0.99
SNF8-204ENST00000506104 VPS37CA5D8V6 355 aaPredicted RBP8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms