RNA–Protein interactions for RNA: ENST00000506018.5

NR1I3-222, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best)

Gene NR1I3, Length 1,380 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-222ENST00000506018 MYH10P35580 1976 aa11.16□□□□□ -0.62
NR1I3-222ENST00000506018 KIF26AQ9ULI4 1882 aaPredicted RBP11.16□□□□□ -0.62
NR1I3-222ENST00000506018 GREB1Q4ZG55 1949 aa11.16□□□□□ -0.62
NR1I3-222ENST00000506018 COL4A2P08572 1712 aa11.16□□□□□ -0.62
NR1I3-222ENST00000506018 TGFB1I1O43294 461 aa11.16□□□□□ -0.62
NR1I3-222ENST00000506018 KINO60870 393 aaKnown RBP11.16□□□□□ -0.62
NR1I3-222ENST00000506018 PHACTR2O75167 634 aa11.16□□□□□ -0.62
NR1I3-222ENST00000506018 LRRN2O75325 713 aa11.16□□□□□ -0.62
NR1I3-222ENST00000506018 CMA1P23946 247 aa11.16□□□□□ -0.62
NR1I3-222ENST00000506018 ACAT1P24752 427 aaKnown RBP11.16□□□□□ -0.62
NR1I3-222ENST00000506018 ANXA13P27216 316 aa11.16□□□□□ -0.62
NR1I3-222ENST00000506018 AP3M2P53677 418 aa11.16□□□□□ -0.62
NR1I3-222ENST00000506018 CYP4F8P98187 520 aa11.16□□□□□ -0.62
NR1I3-222ENST00000506018 CYP24A1Q07973 514 aa11.16□□□□□ -0.62
NR1I3-222ENST00000506018 EHHADHQ08426 723 aa11.16□□□□□ -0.62
NR1I3-222ENST00000506018 CFAP221Q4G0U5 840 aa11.16□□□□□ -0.62
NR1I3-222ENST00000506018 STXBP5Q5T5C0 1151 aa11.16□□□□□ -0.62
NR1I3-222ENST00000506018 ASCL5Q7RTU5 278 aa11.16□□□□□ -0.62
NR1I3-222ENST00000506018 TRAPPC11Q7Z392 1133 aa11.16□□□□□ -0.62
NR1I3-222ENST00000506018 C12orf56Q8IXR9 622 aa11.16□□□□□ -0.62
NR1I3-222ENST00000506018 CMTM8Q8IZV2 173 aa11.16□□□□□ -0.62
NR1I3-222ENST00000506018 OR5B17Q8NGF7 314 aa11.16□□□□□ -0.62
NR1I3-222ENST00000506018 ATRIPQ8WXE1 791 aa11.16□□□□□ -0.62
NR1I3-222ENST00000506018 EXOC4Q96A65 974 aa11.16□□□□□ -0.62
NR1I3-222ENST00000506018 CCDC127Q96BQ5 260 aa11.16□□□□□ -0.62
NR1I3-222ENST00000506018 CEP295NLQ96MC4 621 aa11.16□□□□□ -0.62
NR1I3-222ENST00000506018 SYT15Q9BQS2 421 aa11.16□□□□□ -0.62
NR1I3-222ENST00000506018 SNX25Q9H3E2 840 aa11.16□□□□□ -0.62
NR1I3-222ENST00000506018 MAGEC2Q9UBF1 373 aaPredicted RBP11.16□□□□□ -0.62
NR1I3-222ENST00000506018 SERTAD1Q9UHV2 236 aa11.16□□□□□ -0.62
NR1I3-222ENST00000506018 SIX4Q9UIU6 781 aa11.16□□□□□ -0.62
NR1I3-222ENST00000506018 GTF3C4Q9UKN8 822 aa11.16□□□□□ -0.62
NR1I3-222ENST00000506018 MTF2Q9Y483 593 aaPredicted RBP11.16□□□□□ -0.62
NR1I3-222ENST00000506018 PTPRDP23468 1912 aa11.15□□□□□ -0.62
NR1I3-222ENST00000506018 ANAPC1Q9H1A4 1944 aa11.15□□□□□ -0.62
NR1I3-222ENST00000506018 GABRDO14764 452 aa11.15□□□□□ -0.63
NR1I3-222ENST00000506018 FAM163BP0C2L3 166 aa11.15□□□□□ -0.63
NR1I3-222ENST00000506018 TRIM21P19474 475 aaKnown RBP11.15□□□□□ -0.63
NR1I3-222ENST00000506018 WARSP23381 471 aaKnown RBP11.15□□□□□ -0.63
NR1I3-222ENST00000506018 CASP1P29466 404 aa11.15□□□□□ -0.63
NR1I3-222ENST00000506018 ATICP31939 592 aa11.15□□□□□ -0.63
NR1I3-222ENST00000506018 HOXD13P35453 343 aa11.15□□□□□ -0.63
NR1I3-222ENST00000506018 MAGEA11P43364 429 aa11.15□□□□□ -0.63
NR1I3-222ENST00000506018 SYKP43405 635 aa11.15□□□□□ -0.63
NR1I3-222ENST00000506018 PDE6CP51160 858 aa11.15□□□□□ -0.63
NR1I3-222ENST00000506018 NRLP54845 237 aa11.15□□□□□ -0.63
NR1I3-222ENST00000506018 NLRP12P59046 1061 aa11.15□□□□□ -0.63
NR1I3-222ENST00000506018 AMPD2Q01433 879 aa11.15□□□□□ -0.63
NR1I3-222ENST00000506018 CSTF1Q05048 431 aaKnown RBP11.15□□□□□ -0.63
NR1I3-222ENST00000506018 SOWAHAQ2M3V2 549 aa11.15□□□□□ -0.63
NR1I3-222ENST00000506018 CC2D1AQ6P1N0 951 aaPredicted RBP11.15□□□□□ -0.63
NR1I3-222ENST00000506018 VSTM1Q6UX27 236 aa11.15□□□□□ -0.63
NR1I3-222ENST00000506018 RALGPS2Q86X27 583 aaPredicted RBP11.15□□□□□ -0.63
NR1I3-222ENST00000506018 SCN4BQ8IWT1 228 aa11.15□□□□□ -0.63
NR1I3-222ENST00000506018 CXorf38Q8TB03 319 aa11.15□□□□□ -0.63
NR1I3-222ENST00000506018 SYAP1Q96A49 352 aaPredicted RBP11.15□□□□□ -0.63
NR1I3-222ENST00000506018 TRMT2BQ96GJ1 504 aaKnown RBP11.15□□□□□ -0.63
NR1I3-222ENST00000506018 PAGE5Q96GU1 130 aa11.15□□□□□ -0.63
NR1I3-222ENST00000506018 HINFPQ9BQA5 517 aa11.15□□□□□ -0.63
NR1I3-222ENST00000506018 FAM126AQ9BYI3 521 aaPredicted RBP11.15□□□□□ -0.63
NR1I3-222ENST00000506018 PCDHGA2Q9Y5H1 932 aa11.15□□□□□ -0.63
NR1I3-222ENST00000506018 R4GN57 208 aa11.15□□□□□ -0.63
NR1I3-222ENST00000506018 USP34Q70CQ2 3546 aa11.15□□□□□ -0.63
NR1I3-222ENST00000506018 COL4A3Q01955 1670 aa11.14□□□□□ -0.63
NR1I3-222ENST00000506018 A0A1B0GVL5 298 aa11.14□□□□□ -0.63
NR1I3-222ENST00000506018 GOLGA6L4A6NEF3 574 aa11.14□□□□□ -0.63
NR1I3-222ENST00000506018 NRG2O14511 850 aaPredicted RBP11.14□□□□□ -0.63
NR1I3-222ENST00000506018 TRIM66O15016 1216 aa11.14□□□□□ -0.63
NR1I3-222ENST00000506018 ACTN4O43707 911 aaKnown RBP11.14□□□□□ -0.63
NR1I3-222ENST00000506018 TACC1O75410 805 aa11.14□□□□□ -0.63
NR1I3-222ENST00000506018 NOL4O94818 638 aa11.14□□□□□ -0.63
NR1I3-222ENST00000506018 P4HA1P13674 534 aa11.14□□□□□ -0.63
NR1I3-222ENST00000506018 PFKFB1P16118 471 aa11.14□□□□□ -0.63
NR1I3-222ENST00000506018 CCNE1P24864 410 aa11.14□□□□□ -0.63
NR1I3-222ENST00000506018 CYP2F1P24903 491 aa11.14□□□□□ -0.63
NR1I3-222ENST00000506018 GNL1P36915 607 aaPredicted RBP11.14□□□□□ -0.63
NR1I3-222ENST00000506018 GRIK1P39086 918 aa11.14□□□□□ -0.63
NR1I3-222ENST00000506018 CCR3P51677 355 aa11.14□□□□□ -0.63
NR1I3-222ENST00000506018 CDR1P51861 262 aa11.14□□□□□ -0.63
NR1I3-222ENST00000506018 CYP27A1Q02318 531 aa11.14□□□□□ -0.63
NR1I3-222ENST00000506018 BIRC3Q13489 604 aa11.14□□□□□ -0.63
NR1I3-222ENST00000506018 DDR2Q16832 855 aa11.14□□□□□ -0.63
NR1I3-222ENST00000506018 WDR72Q3MJ13 1102 aa11.14□□□□□ -0.63
NR1I3-222ENST00000506018 DGKKQ5KSL6 1271 aa11.14□□□□□ -0.63
NR1I3-222ENST00000506018 OSTM1Q86WC4 334 aa11.14□□□□□ -0.63
NR1I3-222ENST00000506018 ADSSL1Q8N142 457 aa11.14□□□□□ -0.63
NR1I3-222ENST00000506018 MAB21L3Q8N8X9 362 aa11.14□□□□□ -0.63
NR1I3-222ENST00000506018 OR6B3Q8NGW1 331 aa11.14□□□□□ -0.63
NR1I3-222ENST00000506018 SECISBP2LQ93073 1101 aaKnown RBP11.14□□□□□ -0.63
NR1I3-222ENST00000506018 MYRFLQ96LU7 910 aa11.14□□□□□ -0.63
NR1I3-222ENST00000506018 MKNK1Q9BUB5 465 aa11.14□□□□□ -0.63
NR1I3-222ENST00000506018 CHRDQ9H2X0 955 aa11.14□□□□□ -0.63
NR1I3-222ENST00000506018 LMAN1LQ9HAT1 526 aa11.14□□□□□ -0.63
NR1I3-222ENST00000506018 IL21Q9HBE4 155 aa11.14□□□□□ -0.63
NR1I3-222ENST00000506018 TDP1Q9NUW8 608 aa11.14□□□□□ -0.63
NR1I3-222ENST00000506018 TMLHEQ9NVH6 421 aa11.14□□□□□ -0.63
NR1I3-222ENST00000506018 FRMD4BQ9Y2L6 1034 aa11.14□□□□□ -0.63
NR1I3-222ENST00000506018 PTPRJQ12913 1337 aa11.14□□□□□ -0.63
NR1I3-222ENST00000506018 HELZP42694 1942 aaKnown RBP11.13□□□□□ -0.63
NR1I3-222ENST00000506018 MYO15AQ9UKN7 3530 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms