RNA–Protein interactions for RNA: ENST00000505746.1

PDLIM7-214, Transcript of PDZ and LIM domain 7, humanhuman

TSL 5

Gene PDLIM7, Length 405 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-214ENST00000505746 GAS6Q14393 721 aa12.92□□□□□ -0.34
PDLIM7-214ENST00000505746 ZNF268Q14587 947 aaPredicted RBP12.92□□□□□ -0.34
PDLIM7-214ENST00000505746 MAPRE1Q15691 268 aaKnown RBP12.92□□□□□ -0.34
PDLIM7-214ENST00000505746 SNRNP35Q16560 246 aaKnown RBP12.92□□□□□ -0.34
PDLIM7-214ENST00000505746 SDHAF4Q5VUM1 108 aa12.92□□□□□ -0.34
PDLIM7-214ENST00000505746 SCARA3Q6AZY7 606 aa12.92□□□□□ -0.34
PDLIM7-214ENST00000505746 ATL3Q6DD88 541 aa12.92□□□□□ -0.34
PDLIM7-214ENST00000505746 FAM171BQ6P995 826 aa12.92□□□□□ -0.34
PDLIM7-214ENST00000505746 UNC13DQ70J99 1090 aa12.92□□□□□ -0.34
PDLIM7-214ENST00000505746 HS2ST1Q7LGA3 356 aa12.92□□□□□ -0.34
PDLIM7-214ENST00000505746 TRAPPC11Q7Z392 1133 aa12.92□□□□□ -0.34
PDLIM7-214ENST00000505746 LIMS2Q7Z4I7 341 aa12.92□□□□□ -0.34
PDLIM7-214ENST00000505746 HSCBQ8IWL3 235 aa12.92□□□□□ -0.34
PDLIM7-214ENST00000505746 SCN4BQ8IWT1 228 aa12.92□□□□□ -0.34
PDLIM7-214ENST00000505746 FSIP1Q8NA03 581 aa12.92□□□□□ -0.34
PDLIM7-214ENST00000505746 RDH13Q8NBN7 331 aa12.92□□□□□ -0.34
PDLIM7-214ENST00000505746 EXOC4Q96A65 974 aa12.92□□□□□ -0.34
PDLIM7-214ENST00000505746 FAM84AQ96KN4 292 aa12.92□□□□□ -0.34
PDLIM7-214ENST00000505746 MYRFLQ96LU7 910 aa12.92□□□□□ -0.34
PDLIM7-214ENST00000505746 FNBP1Q96RU3 617 aa12.92□□□□□ -0.34
PDLIM7-214ENST00000505746 MMS19Q96T76 1030 aa12.92□□□□□ -0.34
PDLIM7-214ENST00000505746 FAM83CQ9BQN1 747 aa12.92□□□□□ -0.34
PDLIM7-214ENST00000505746 AGPAT3Q9NRZ7 376 aa12.92□□□□□ -0.34
PDLIM7-214ENST00000505746 MAGEC2Q9UBF1 373 aaPredicted RBP12.92□□□□□ -0.34
PDLIM7-214ENST00000505746 PTPRJQ12913 1337 aa12.91□□□□□ -0.34
PDLIM7-214ENST00000505746 TGFB1I1O43294 461 aa12.91□□□□□ -0.34
PDLIM7-214ENST00000505746 FAM163BP0C2L3 166 aa12.91□□□□□ -0.34
PDLIM7-214ENST00000505746 DLATP10515 647 aaKnown RBP12.91□□□□□ -0.34
PDLIM7-214ENST00000505746 TNNI1P19237 187 aa12.91□□□□□ -0.34
PDLIM7-214ENST00000505746 WARSP23381 471 aaKnown RBP12.91□□□□□ -0.34
PDLIM7-214ENST00000505746 MAGEA11P43364 429 aa12.91□□□□□ -0.34
PDLIM7-214ENST00000505746 ME1P48163 572 aa12.91□□□□□ -0.34
PDLIM7-214ENST00000505746 GRSF1Q12849 480 aaKnown RBP eCLIP12.91□□□□□ -0.34
PDLIM7-214ENST00000505746 CCINQ13939 588 aa12.91□□□□□ -0.34
PDLIM7-214ENST00000505746 PDGFRLQ15198 375 aa12.91□□□□□ -0.34
PDLIM7-214ENST00000505746 FOXD4L5Q5VV16 416 aaPredicted RBP12.91□□□□□ -0.34
PDLIM7-214ENST00000505746 LAIR1Q6GTX8 287 aa12.91□□□□□ -0.34
PDLIM7-214ENST00000505746 VSTM1Q6UX27 236 aa12.91□□□□□ -0.34
PDLIM7-214ENST00000505746 DGLUCYQ7Z3D6 616 aa12.91□□□□□ -0.34
PDLIM7-214ENST00000505746 LONP2Q86WA8 852 aa12.91□□□□□ -0.34
PDLIM7-214ENST00000505746 XXYLT1Q8NBI6 393 aa12.91□□□□□ -0.34
PDLIM7-214ENST00000505746 FOXD4L4Q8WXT5 416 aaPredicted RBP12.91□□□□□ -0.34
PDLIM7-214ENST00000505746 CEP295NLQ96MC4 621 aa12.91□□□□□ -0.34
PDLIM7-214ENST00000505746 SYT15Q9BQS2 421 aa12.91□□□□□ -0.34
PDLIM7-214ENST00000505746 EHD2Q9NZN4 543 aa12.91□□□□□ -0.34
PDLIM7-214ENST00000505746 CGNQ9P2M7 1197 aaKnown RBP12.91□□□□□ -0.34
PDLIM7-214ENST00000505746 CFAP45Q9UL16 551 aa12.91□□□□□ -0.34
PDLIM7-214ENST00000505746 CCL26Q9Y258 94 aa12.91□□□□□ -0.34
PDLIM7-214ENST00000505746 MIA3Q5JRA6 1907 aa12.91□□□□□ -0.34
PDLIM7-214ENST00000505746 TRAV19A0A0A6YYK7 116 aa12.9□□□□□ -0.34
PDLIM7-214ENST00000505746 PVALEFA0A1B0GWK0 134 aa12.9□□□□□ -0.34
PDLIM7-214ENST00000505746 PRR5-ARHGAP8B1AHC4 643 aa12.9□□□□□ -0.34
PDLIM7-214ENST00000505746 CLIC2O15247 247 aa12.9□□□□□ -0.34
PDLIM7-214ENST00000505746 ATG13O75143 517 aa12.9□□□□□ -0.34
PDLIM7-214ENST00000505746 ATP2C2O75185 946 aa12.9□□□□□ -0.34
PDLIM7-214ENST00000505746 F13A1P00488 732 aa12.9□□□□□ -0.34
PDLIM7-214ENST00000505746 CKMP06732 381 aa12.9□□□□□ -0.34
PDLIM7-214ENST00000505746 USP17L7P0C7H9 530 aa12.9□□□□□ -0.34
PDLIM7-214ENST00000505746 LMO2P25791 158 aa12.9□□□□□ -0.34
PDLIM7-214ENST00000505746 ANXA13P27216 316 aa12.9□□□□□ -0.34
PDLIM7-214ENST00000505746 HOXA6P31267 233 aa12.9□□□□□ -0.34
PDLIM7-214ENST00000505746 PDE6CP51160 858 aa12.9□□□□□ -0.34
PDLIM7-214ENST00000505746 CYP2J2P51589 502 aa12.9□□□□□ -0.34
PDLIM7-214ENST00000505746 ARHGAP8P85298 464 aa12.9□□□□□ -0.34
PDLIM7-214ENST00000505746 LMNB2Q03252 620 aa12.9□□□□□ -0.34
PDLIM7-214ENST00000505746 FAM160A1Q05DH4 1040 aa12.9□□□□□ -0.34
PDLIM7-214ENST00000505746 CYP24A1Q07973 514 aa12.9□□□□□ -0.34
PDLIM7-214ENST00000505746 SIM2Q14190 667 aaPredicted RBP12.9□□□□□ -0.34
PDLIM7-214ENST00000505746 PSMD6Q15008 389 aa12.9□□□□□ -0.34
PDLIM7-214ENST00000505746 FOXD4L6Q3SYB3 417 aaPredicted RBP12.9□□□□□ -0.34
PDLIM7-214ENST00000505746 TMEM196Q5HYL7 178 aa12.9□□□□□ -0.34
PDLIM7-214ENST00000505746 WDR44Q5JSH3 913 aa12.9□□□□□ -0.34
PDLIM7-214ENST00000505746 FOXD4L3Q6VB84 417 aaPredicted RBP12.9□□□□□ -0.34
PDLIM7-214ENST00000505746 PRR23BQ6ZRT6 265 aa12.9□□□□□ -0.34
PDLIM7-214ENST00000505746 Q6ZS52 159 aa12.9□□□□□ -0.34
PDLIM7-214ENST00000505746 NELFCDQ8IXH7 590 aa12.9□□□□□ -0.34
PDLIM7-214ENST00000505746 CEP57L1Q8IYX8 460 aa12.9□□□□□ -0.34
PDLIM7-214ENST00000505746 STKLD1Q8NE28 680 aa12.9□□□□□ -0.34
PDLIM7-214ENST00000505746 SCFD1Q8WVM8 642 aa12.9□□□□□ -0.34
PDLIM7-214ENST00000505746 KBTBD7Q8WVZ9 684 aa12.9□□□□□ -0.34
PDLIM7-214ENST00000505746 SPATA17Q96L03 361 aa12.9□□□□□ -0.34
PDLIM7-214ENST00000505746 CGRRF1Q99675 332 aa12.9□□□□□ -0.34
PDLIM7-214ENST00000505746 BLZF1Q9H2G9 400 aa12.9□□□□□ -0.34
PDLIM7-214ENST00000505746 SNX25Q9H3E2 840 aa12.9□□□□□ -0.34
PDLIM7-214ENST00000505746 EBF3Q9H4W6 596 aa12.9□□□□□ -0.34
PDLIM7-214ENST00000505746 TRPC7Q9HCX4 862 aa12.9□□□□□ -0.34
PDLIM7-214ENST00000505746 HPS4Q9NQG7 708 aa12.9□□□□□ -0.34
PDLIM7-214ENST00000505746 DLL3Q9NYJ7 618 aa12.9□□□□□ -0.34
PDLIM7-214ENST00000505746 PCDHA7Q9UN72 937 aa12.9□□□□□ -0.34
PDLIM7-214ENST00000505746 COL4A2P08572 1712 aa12.9□□□□□ -0.34
PDLIM7-214ENST00000505746 TSC2P49815 1807 aa12.9□□□□□ -0.34
PDLIM7-214ENST00000505746 RIF1Q5UIP0 2472 aaKnown RBP12.89□□□□□ -0.35
PDLIM7-214ENST00000505746 CHURC1-FNTBB4DL54 471 aa12.89□□□□□ -0.35
PDLIM7-214ENST00000505746 K7ESF4 209 aa12.89□□□□□ -0.35
PDLIM7-214ENST00000505746 TRDMT1O14717 391 aaKnown RBP12.89□□□□□ -0.35
PDLIM7-214ENST00000505746 HCRTO43612 131 aa12.89□□□□□ -0.35
PDLIM7-214ENST00000505746 TACC1O75410 805 aa12.89□□□□□ -0.35
PDLIM7-214ENST00000505746 TADA3O75528 432 aa12.89□□□□□ -0.35
PDLIM7-214ENST00000505746 CST3P01034 146 aaPredicted RBP12.89□□□□□ -0.35
PDLIM7-214ENST00000505746 RETP07949 1114 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 79.2 ms